Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02759

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4
2,914,199	+				-2.1
2,914,268	+		MPMX20_02758	0.13	-0.6
2,914,302	-		MPMX20_02758	0.17	+0.9
2,914,447	-		MPMX20_02758	0.33	-2.4
2,914,486	+		MPMX20_02758	0.38	-0.4
2,914,491	+		MPMX20_02758	0.38	+0.2
2,914,653	+		MPMX20_02758	0.57	+0.9
2,914,675	-		MPMX20_02758	0.59	-1.3
2,914,675	-		MPMX20_02758	0.59	+1.0
2,914,711	-		MPMX20_02758	0.63	-0.7
2,914,781	+		MPMX20_02758	0.71	-0.0
2,914,833	+		MPMX20_02758	0.77	-0.1
2,914,839	+		MPMX20_02758	0.77	+0.3
2,914,841	-		MPMX20_02758	0.78	-1.9
2,914,932	-		MPMX20_02758	0.88	-2.6
2,914,934	-		MPMX20_02758	0.88	-0.7
2,914,961	+				+1.7
2,914,961	+				-0.8
2,914,963	+				+1.4
2,914,980	-				-0.4
2,915,081	-				-3.8
2,915,087	+				-0.5
2,915,095	-				-1.3
2,915,111	-				+0.9
2,915,131	+				-0.7
2,915,138	-				+0.6
2,915,156	+				-2.0
2,915,162	-				+0.6
2,915,164	-				-1.3
2,915,175	-				-1.1
2,915,200	+				+0.2
2,915,200	+				-0.5
2,915,200	+				-1.1
2,915,200	+				-3.8
2,915,200	+				-2.2
2,915,200	+				-1.8
2,915,200	+				+0.1
2,915,200	+				-2.7
2,915,200	+				-2.5
2,915,208	-				-2.2
2,915,208	-				+0.1
2,915,208	-				-2.7
2,915,208	-				-0.6
2,915,208	-				-1.4
2,915,208	-				-0.4
2,915,208	-				-1.3
2,915,208	-				-1.4
2,915,208	-				-1.1
2,915,208	-				-0.3
2,915,208	-				-0.5
2,915,208	-				-1.7
2,915,298	-				-3.4
2,915,452	+		MPMX20_02759	0.20	-3.4
2,915,460	-		MPMX20_02759	0.21	-3.2
2,915,462	+		MPMX20_02759	0.21	-2.9
2,915,462	+		MPMX20_02759	0.21	-2.1
2,915,462	+		MPMX20_02759	0.21	-0.5
2,915,465	-		MPMX20_02759	0.21	+1.2
2,915,636	-		MPMX20_02759	0.33	-2.6
2,915,666	+		MPMX20_02759	0.35	-0.9
2,915,681	-		MPMX20_02759	0.36	-0.9
2,915,687	-		MPMX20_02759	0.36	+0.3
2,915,777	-		MPMX20_02759	0.43	-0.1
2,915,959	+		MPMX20_02759	0.55	-3.0
2,915,972	-		MPMX20_02759	0.56	+0.4
2,916,053	-		MPMX20_02759	0.62	-2.8
2,916,053	-		MPMX20_02759	0.62	-1.6
2,916,063	-		MPMX20_02759	0.62	-0.7
2,916,063	-		MPMX20_02759	0.62	-0.7
2,916,074	+		MPMX20_02759	0.63	-2.1
2,916,074	+		MPMX20_02759	0.63	-2.4
2,916,074	+		MPMX20_02759	0.63	+0.2
2,916,111	-		MPMX20_02759	0.66	+0.8
2,916,140	-		MPMX20_02759	0.68	-0.0
2,916,159	-		MPMX20_02759	0.69	-0.0
2,916,218	-		MPMX20_02759	0.73	-2.0
2,916,277	+		MPMX20_02759	0.77	-1.4
2,916,295	-		MPMX20_02759	0.78	-0.9
2,916,346	+		MPMX20_02759	0.82	-1.6
2,916,358	+		MPMX20_02759	0.83	-3.4
2,916,433	+		MPMX20_02759	0.88	-0.9
2,916,523	-				-2.6
2,916,616	+				-1.3
2,916,631	+				+0.1
2,916,681	-				-0.9