Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02507

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4
2,647,618	+		MPMX20_02505	0.58	+1.0
2,647,627	-		MPMX20_02505	0.59	+1.0
2,647,629	+		MPMX20_02505	0.59	+0.6
2,647,657	-		MPMX20_02505	0.63	+0.3
2,647,657	-		MPMX20_02505	0.63	-2.3
2,647,667	-		MPMX20_02505	0.64	+0.2
2,647,903	+				+0.8
2,647,940	+				+0.1
2,647,992	-				-0.5
2,648,076	-		MPMX20_02506	0.24	+0.6
2,648,135	-		MPMX20_02506	0.34	+1.7
2,648,170	+		MPMX20_02506	0.40	-3.1
2,648,203	+		MPMX20_02506	0.45	+2.0
2,648,222	-		MPMX20_02506	0.48	+0.1
2,648,257	+		MPMX20_02506	0.54	-0.0
2,648,298	+		MPMX20_02506	0.61	-1.5
2,648,332	-		MPMX20_02506	0.67	+1.0
2,648,332	-		MPMX20_02506	0.67	-3.1
2,648,402	-		MPMX20_02506	0.79	+1.7
2,648,413	+		MPMX20_02506	0.81	+0.3
2,648,413	+		MPMX20_02506	0.81	+1.9
2,648,423	-		MPMX20_02506	0.82	-2.7
2,648,617	-				-0.1
2,648,709	-		MPMX20_02507	0.17	-1.3
2,648,766	-		MPMX20_02507	0.23	+0.2
2,648,770	+		MPMX20_02507	0.24	-2.4
2,648,770	+		MPMX20_02507	0.24	-0.5
2,648,770	+		MPMX20_02507	0.24	-3.1
2,648,833	-		MPMX20_02507	0.31	+1.0
2,648,876	+		MPMX20_02507	0.36	-0.8
2,648,881	+		MPMX20_02507	0.36	-1.0
2,648,884	-		MPMX20_02507	0.37	-0.5
2,648,902	-		MPMX20_02507	0.39	-0.5
2,648,902	-		MPMX20_02507	0.39	-1.7
2,648,955	-		MPMX20_02507	0.45	-1.1
2,648,962	+		MPMX20_02507	0.46	-3.1
2,648,962	-		MPMX20_02507	0.46	-1.7
2,649,057	+		MPMX20_02507	0.57	-0.5
2,649,167	-		MPMX20_02507	0.69	-0.3
2,649,187	-		MPMX20_02507	0.71	-1.5
2,649,201	+		MPMX20_02507	0.73	-1.1
2,649,201	-		MPMX20_02507	0.73	-2.1
2,649,316	+		MPMX20_02507	0.86	-0.5
2,649,359	-				-0.0
2,649,416	-				+0.1
2,649,477	+				-1.5
2,649,485	-				+0.9
2,649,489	+				+0.2
2,649,502	-				+0.5
2,649,546	-				+0.3
2,649,552	-				+0.5
2,649,563	-				-0.0
2,649,568	-				-0.2
2,649,575	+				+0.7
2,649,607	+		MPMX20_02508	0.12	+2.0
2,649,620	+		MPMX20_02508	0.14	+1.9
2,649,620	+		MPMX20_02508	0.14	-0.2
2,649,645	-		MPMX20_02508	0.18	-0.2
2,649,669	+		MPMX20_02508	0.22	+0.7
2,649,724	-		MPMX20_02508	0.31	-2.7
2,649,724	-		MPMX20_02508	0.31	+1.3
2,649,724	-		MPMX20_02508	0.31	+0.5
2,649,724	-		MPMX20_02508	0.31	+0.0
2,649,724	-		MPMX20_02508	0.31	+0.9
2,649,810	-		MPMX20_02508	0.44	+0.6
2,649,828	+		MPMX20_02508	0.47	+0.0
2,649,838	+		MPMX20_02508	0.49	-0.3
2,649,912	+		MPMX20_02508	0.61	-0.3
2,649,925	-		MPMX20_02508	0.63	+1.5
2,649,926	-		MPMX20_02508	0.63	-0.6
2,649,956	+		MPMX20_02508	0.68	-0.5
2,649,962	+		MPMX20_02508	0.69	-0.0
2,650,040	-		MPMX20_02508	0.81	-0.4
2,650,074	+		MPMX20_02508	0.87	+0.5
2,650,212	-				+0.2
2,650,256	+		MPMX20_02509	0.12	-0.8
2,650,295	+		MPMX20_02509	0.16	+0.8
2,650,319	-		MPMX20_02509	0.19	-3.0