Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02488

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4
2,627,616	+		MPMX20_02487	0.65	+0.6
2,627,697	-		MPMX20_02487	0.69	-1.6
2,627,762	-		MPMX20_02487	0.73	+1.1
2,627,833	+		MPMX20_02487	0.76	+0.1
2,627,833	+		MPMX20_02487	0.76	-1.2
2,627,833	+		MPMX20_02487	0.76	+0.3
2,627,833	+		MPMX20_02487	0.76	-0.1
2,627,841	-		MPMX20_02487	0.77	+2.4
2,627,873	+		MPMX20_02487	0.79	+0.2
2,627,881	-		MPMX20_02487	0.79	+0.1
2,627,901	+		MPMX20_02487	0.80	+1.1
2,627,901	+		MPMX20_02487	0.80	+0.9
2,627,901	+		MPMX20_02487	0.80	+0.2
2,627,903	-		MPMX20_02487	0.80	+0.8
2,627,903	-		MPMX20_02487	0.80	+1.4
2,627,906	+		MPMX20_02487	0.80	+2.6
2,627,935	+		MPMX20_02487	0.82	-0.9
2,627,996	+		MPMX20_02487	0.85	+1.5
2,628,013	+		MPMX20_02487	0.86	+6.1
2,628,018	+		MPMX20_02487	0.86	+0.1
2,628,026	-		MPMX20_02487	0.86	-1.1
2,628,036	-		MPMX20_02487	0.87	-0.9
2,628,096	+				+0.2
2,628,102	-				+0.2
2,628,140	-				+1.2
2,628,156	+				+1.0
2,628,171	+				-1.3
2,628,181	+				-0.7
2,628,194	-				+0.1
2,628,194	-				-2.9
2,628,202	-				+0.9
2,628,263	+				+0.0
2,628,263	+				-0.1
2,628,263	+				+0.1
2,628,263	+				-0.5
2,628,263	+				+1.1
2,628,263	+				+0.5
2,628,263	+				-3.4
2,628,271	-				-2.2
2,628,271	-				-0.9
2,628,271	-				+1.5
2,628,284	+				-0.9
2,628,284	+				+0.6
2,628,308	+				-1.2
2,628,320	+				+0.2
2,628,421	+				-2.6
2,628,421	+				+0.6
2,628,612	+				-0.2
2,628,623	+				-0.6
2,628,631	-				+1.3
2,628,631	-				+1.8
2,628,631	-				+2.3
2,628,658	-				-1.3
2,628,660	+				+1.9
2,628,667	-				+4.4
2,628,685	+				+0.2
2,628,690	+				-1.3
2,628,697	+				-0.5
2,628,698	-				+4.6
2,628,698	-				+2.1
2,628,698	-				+2.6
2,628,705	-				+2.9
2,628,801	-				+2.5
2,628,820	-		MPMX20_02488	0.10	+3.4
2,628,887	-		MPMX20_02488	0.14	-0.9
2,628,887	-		MPMX20_02488	0.14	+5.5
2,628,904	+		MPMX20_02488	0.15	-1.1
2,628,920	+		MPMX20_02488	0.15	-0.5
2,628,930	+		MPMX20_02488	0.16	+1.5
2,628,930	+		MPMX20_02488	0.16	+2.3
2,628,939	-		MPMX20_02488	0.16	+1.9
2,628,942	+		MPMX20_02488	0.17	+0.9
2,628,969	+		MPMX20_02488	0.18	-1.6
2,628,974	+		MPMX20_02488	0.18	+1.3
2,629,031	+		MPMX20_02488	0.21	+1.2
2,629,087	-		MPMX20_02488	0.24	+0.9
2,629,097	-		MPMX20_02488	0.24	+0.5
2,629,114	+		MPMX20_02488	0.25	+1.5
2,629,162	-		MPMX20_02488	0.28	-1.0
2,629,162	-		MPMX20_02488	0.28	+3.9
2,629,279	-		MPMX20_02488	0.33	+5.7
2,629,280	+		MPMX20_02488	0.33	+2.1
2,629,280	+		MPMX20_02488	0.33	+1.2
2,629,297	+		MPMX20_02488	0.34	-2.8
2,629,305	+		MPMX20_02488	0.35	+3.5
2,629,320	+		MPMX20_02488	0.35	+1.6
2,629,320	+		MPMX20_02488	0.35	-2.8
2,629,328	-		MPMX20_02488	0.36	+1.4
2,629,328	-		MPMX20_02488	0.36	+2.1
2,629,353	+		MPMX20_02488	0.37	-0.6
2,629,353	+		MPMX20_02488	0.37	+2.6
2,629,410	+		MPMX20_02488	0.40	+7.4
2,629,414	+		MPMX20_02488	0.40	+2.1
2,629,553	+		MPMX20_02488	0.47	+2.9
2,629,594	-		MPMX20_02488	0.49	+1.8
2,629,606	-		MPMX20_02488	0.50	+4.7
2,629,729	-		MPMX20_02488	0.56	+0.3
2,629,741	+		MPMX20_02488	0.57	+2.5
2,629,785	+		MPMX20_02488	0.59	+1.7
2,629,813	-		MPMX20_02488	0.60	-0.2
2,629,813	-		MPMX20_02488	0.60	+1.1
2,629,841	+		MPMX20_02488	0.62	+8.4
2,629,841	+		MPMX20_02488	0.62	+0.8
2,629,841	+		MPMX20_02488	0.62	+4.5
2,629,849	-		MPMX20_02488	0.62	+0.5
2,629,917	+		MPMX20_02488	0.65	+0.9
2,630,033	-		MPMX20_02488	0.71	+1.0
2,630,047	-		MPMX20_02488	0.72	+5.3
2,630,089	-		MPMX20_02488	0.74	+2.1
2,630,114	-		MPMX20_02488	0.75	+3.3
2,630,155	-		MPMX20_02488	0.77	+2.5
2,630,195	+		MPMX20_02488	0.79	-0.5
2,630,305	+		MPMX20_02488	0.85	+6.1
2,630,431	+				+2.2
2,630,444	-				+0.8
2,630,446	-				-1.8
2,630,446	-				+0.1
2,630,466	-				+1.0
2,630,532	-				+1.9
2,630,621	-				+1.0
2,630,665	-				-0.7
2,630,716	+		MPMX20_02489	0.13	-1.1
2,630,716	+		MPMX20_02489	0.13	+0.6
2,630,747	+		MPMX20_02489	0.17	-0.2
2,630,749	+		MPMX20_02489	0.17	-0.7
2,630,774	+		MPMX20_02489	0.20	-0.9
2,630,776	-		MPMX20_02489	0.20	-1.7
2,630,776	-		MPMX20_02489	0.20	+1.4
2,630,782	-		MPMX20_02489	0.21	+1.0
2,630,782	-		MPMX20_02489	0.21	+0.5
2,630,782	-		MPMX20_02489	0.21	+0.3
2,630,782	-		MPMX20_02489	0.21	+1.5
2,630,797	-		MPMX20_02489	0.23	-1.9
2,630,826	+		MPMX20_02489	0.26	-1.5
2,630,835	-		MPMX20_02489	0.27	+1.2
2,630,840	-		MPMX20_02489	0.28	+0.2
2,630,850	-		MPMX20_02489	0.29	-0.1
2,630,882	+		MPMX20_02489	0.32	-3.1
2,630,887	+		MPMX20_02489	0.33	-0.2
2,630,956	+		MPMX20_02489	0.41	+0.9
2,630,979	-		MPMX20_02489	0.44	+0.5
2,631,011	-		MPMX20_02489	0.47	+1.9
2,631,052	+		MPMX20_02489	0.52	+0.4
2,631,052	+		MPMX20_02489	0.52	+0.8
2,631,052	+		MPMX20_02489	0.52	+1.5
2,631,052	+		MPMX20_02489	0.52	+1.2
2,631,052	+		MPMX20_02489	0.52	+1.1
2,631,078	+		MPMX20_02489	0.55	+0.6
2,631,086	-		MPMX20_02489	0.56	+0.3
2,631,107	-		MPMX20_02489	0.58	+1.3
2,631,110	+		MPMX20_02489	0.59	+2.2
2,631,110	+		MPMX20_02489	0.59	+0.9
2,631,118	-		MPMX20_02489	0.60	+0.4
2,631,149	-		MPMX20_02489	0.63	-0.5
2,631,158	-		MPMX20_02489	0.64	-2.8
2,631,295	+		MPMX20_02489	0.80	-1.3
2,631,295	+		MPMX20_02489	0.80	+1.0
2,631,303	-		MPMX20_02489	0.81	+0.2
2,631,303	-		MPMX20_02489	0.81	-1.1
2,631,314	-		MPMX20_02489	0.82	+0.0
2,631,370	-		MPMX20_02489	0.89	-0.8
2,631,378	+		MPMX20_02489	0.90	-1.7
2,631,396	-				+1.7
2,631,400	+				+0.5
2,631,400	+				-0.1
2,631,400	+				+0.5
2,631,400	+				-0.5
2,631,400	+				+0.3
2,631,400	+				-1.3
2,631,400	+				-0.9
2,631,400	+				+0.9
2,631,408	-				+0.4
2,631,408	-				-0.3
2,631,408	-				-0.7
2,631,408	-				+0.4
2,631,408	-				-1.7
2,631,419	+				+0.1
2,631,437	+				+0.0
2,631,437	+				-0.9
2,631,444	+				+0.9
2,631,445	-				-0.7
2,631,445	-				-0.0
2,631,445	-				+0.5
2,631,450	-				+0.9
2,631,461	-				-1.1
2,631,469	+				-1.6
2,631,469	+				-0.7
2,631,471	-				-0.4
2,631,504	+				+0.3
2,631,504	+				-0.1
2,631,504	+				-0.9
2,631,504	+				+0.5
2,631,504	+				-0.9
2,631,504	+				-1.7
2,631,504	+				-1.7
2,631,504	+				-1.6
2,631,504	+				-0.7
2,631,504	+				+1.1
2,631,504	+				-1.7
2,631,504	+				+0.5
2,631,504	+				-2.0
2,631,504	+				+0.2
2,631,504	+				-1.6
2,631,504	+				-0.9
2,631,504	+				-1.7
2,631,504	+				-1.6
2,631,512	-				-2.3
2,631,512	-				-2.8
2,631,512	-				-0.1
2,631,512	-				+0.6
2,631,512	-				-0.4
2,631,512	-				+0.9
2,631,512	-				-1.7
2,631,512	-				-1.1
2,631,512	-				+2.1
2,631,512	-				-2.7
2,631,512	-				-0.1
2,631,512	-				-1.3
2,631,522	+				+0.0
2,631,522	+				+0.7
2,631,522	+				-1.0
2,631,522	+				+1.5
2,631,522	+				-0.3
2,631,522	+				-1.2
2,631,530	-				-1.8
2,631,535	+				-0.7