Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02396

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4
2,527,303	+				+0.4
2,527,364	+		MPMX20_02394	0.25	-1.0
2,527,364	+		MPMX20_02394	0.25	-0.4
2,527,369	+		MPMX20_02394	0.27	+0.3
2,527,369	+		MPMX20_02394	0.27	-0.2
2,527,372	-		MPMX20_02394	0.29	+0.0
2,527,372	-		MPMX20_02394	0.29	+0.1
2,527,377	-		MPMX20_02394	0.31	+1.3
2,527,424	+		MPMX20_02394	0.51	+0.1
2,527,433	-		MPMX20_02394	0.55	+1.3
2,527,435	+		MPMX20_02394	0.56	-0.5
2,527,435	+		MPMX20_02394	0.56	-0.7
2,527,443	-		MPMX20_02394	0.59	+1.7
2,527,571	-				+1.3
2,527,593	+				+1.9
2,527,684	+		MPMX20_02395	0.18	+0.1
2,527,684	+		MPMX20_02395	0.18	-0.7
2,527,684	+		MPMX20_02395	0.18	+0.3
2,527,692	-		MPMX20_02395	0.19	+1.6
2,527,692	-		MPMX20_02395	0.19	-0.5
2,527,692	-		MPMX20_02395	0.19	+0.3
2,527,694	-		MPMX20_02395	0.19	+0.5
2,527,704	-		MPMX20_02395	0.21	+1.5
2,527,755	+		MPMX20_02395	0.29	+0.1
2,527,755	+		MPMX20_02395	0.29	-1.2
2,527,755	+		MPMX20_02395	0.29	-0.0
2,527,758	-		MPMX20_02395	0.30	-0.6
2,527,763	-		MPMX20_02395	0.31	-1.7
2,527,763	-		MPMX20_02395	0.31	+1.4
2,527,798	+		MPMX20_02395	0.36	-0.5
2,527,854	-		MPMX20_02395	0.45	-0.2
2,527,865	+		MPMX20_02395	0.47	-0.5
2,527,956	+		MPMX20_02395	0.62	-1.1
2,527,964	+		MPMX20_02395	0.63	-0.3
2,527,972	-		MPMX20_02395	0.64	+0.7
2,528,003	+		MPMX20_02395	0.69	-1.7
2,528,066	-		MPMX20_02395	0.80	+0.8
2,528,086	+		MPMX20_02395	0.83	+0.1
2,528,094	-		MPMX20_02395	0.84	-0.6
2,528,113	+		MPMX20_02395	0.87	+2.2
2,528,113	+		MPMX20_02395	0.87	-2.5
2,528,158	+				-0.7
2,528,227	-				+0.8
2,528,230	+				-0.7
2,528,242	+				+0.4
2,528,250	-				+1.1
2,528,261	+				-2.7
2,528,275	-				-0.3
2,528,355	+		MPMX20_02396	0.14	-0.3
2,528,355	+		MPMX20_02396	0.14	+0.2
2,528,355	+		MPMX20_02396	0.14	-1.0
2,528,355	+		MPMX20_02396	0.14	+0.2
2,528,355	+		MPMX20_02396	0.14	-0.2
2,528,363	-		MPMX20_02396	0.15	-0.6
2,528,363	-		MPMX20_02396	0.15	+2.3
2,528,464	-		MPMX20_02396	0.26	+1.3
2,528,485	+		MPMX20_02396	0.29	-0.5
2,528,531	+		MPMX20_02396	0.34	-0.3
2,528,543	-		MPMX20_02396	0.35	+1.1
2,528,763	+		MPMX20_02396	0.60	+0.7
2,528,787	-		MPMX20_02396	0.63	-0.7
2,528,796	-		MPMX20_02396	0.64	+1.8
2,528,801	-		MPMX20_02396	0.64	-0.2
2,528,856	-		MPMX20_02396	0.70	+0.7
2,528,927	+		MPMX20_02396	0.78	+1.0
2,528,937	+		MPMX20_02396	0.80	-0.5
2,528,990	-		MPMX20_02396	0.85	-0.4
2,529,043	+				-0.2
2,529,061	-				+1.8
2,529,126	+				-0.7
2,529,134	-				-1.2
2,529,184	-				+1.8
2,529,184	-				+0.0
2,529,184	-				-0.2
2,529,192	+				+0.7
2,529,192	+				-1.1
2,529,192	+				+1.0
2,529,192	+				+1.3
2,529,192	+				+0.9
2,529,192	+				+0.3
2,529,192	+				+1.3
2,529,192	+				+1.0
2,529,192	+				-0.6
2,529,192	+				-1.5
2,529,200	-				+1.1
2,529,200	-				-0.5
2,529,200	-				-0.1
2,529,200	-				-1.1
2,529,200	-				+0.5
2,529,200	-				+0.1
2,529,200	-				-0.7
2,529,200	-				+0.6
2,529,200	-				-1.2
2,529,200	-				+0.3
2,529,335	+		MPMX20_02397	0.27	-0.9
2,529,338	-		MPMX20_02397	0.27	-1.5
2,529,340	+		MPMX20_02397	0.27	-0.3
2,529,340	+		MPMX20_02397	0.27	-1.0
2,529,348	-		MPMX20_02397	0.28	+0.0
2,529,357	+		MPMX20_02397	0.30	+1.5
2,529,365	-		MPMX20_02397	0.31	-2.0
2,529,381	+		MPMX20_02397	0.33	-1.6
2,529,384	-		MPMX20_02397	0.33	-0.9
2,529,398	-		MPMX20_02397	0.35	-0.1
2,529,415	-		MPMX20_02397	0.37	+0.5
2,529,453	-		MPMX20_02397	0.42	+1.1
2,529,483	-		MPMX20_02397	0.46	-0.7
2,529,513	+		MPMX20_02397	0.50	-0.1
2,529,624	-		MPMX20_02397	0.64	+0.2
2,529,628	+		MPMX20_02397	0.65	+0.4
2,529,638	+		MPMX20_02397	0.66	+0.4
2,529,645	+		MPMX20_02397	0.67	+1.6
2,529,713	+		MPMX20_02397	0.76	+0.0
2,529,713	+		MPMX20_02397	0.76	-0.2
2,529,715	-		MPMX20_02397	0.76	+0.5
2,529,736	+		MPMX20_02397	0.79	+0.9
2,529,736	+		MPMX20_02397	0.79	-0.5
2,529,736	+		MPMX20_02397	0.79	+0.0
2,529,736	+		MPMX20_02397	0.79	+0.6
2,529,744	-		MPMX20_02397	0.80	-1.9
2,529,744	-		MPMX20_02397	0.80	+1.0
2,529,744	-		MPMX20_02397	0.80	+0.5
2,529,778	+		MPMX20_02397	0.84	+1.3
2,529,816	+		MPMX20_02397	0.89	+0.5
2,529,877	-				+0.4
2,529,882	-				+0.3
2,529,911	-				-1.4
2,529,914	+				-1.6
2,529,917	-				+0.7
2,529,934	+				+0.0
2,529,997	-		MPMX20_02398	0.12	-1.9
2,530,002	+		MPMX20_02398	0.13	-0.6
2,530,004	+		MPMX20_02398	0.13	-0.0
2,530,010	-		MPMX20_02398	0.13	+0.3
2,530,036	-		MPMX20_02398	0.16	+1.0
2,530,048	-		MPMX20_02398	0.18	-2.2
2,530,095	+		MPMX20_02398	0.23	+0.1
2,530,095	+		MPMX20_02398	0.23	+0.3
2,530,103	-		MPMX20_02398	0.24	+0.5
2,530,114	+		MPMX20_02398	0.25	+0.2
2,530,114	+		MPMX20_02398	0.25	-0.7
2,530,114	+		MPMX20_02398	0.25	-0.6
2,530,114	+		MPMX20_02398	0.25	-0.4
2,530,114	+		MPMX20_02398	0.25	-1.9
2,530,114	+		MPMX20_02398	0.25	-0.1
2,530,114	+		MPMX20_02398	0.25	+1.2