Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02362

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4
2,489,321	-				+0.2
2,489,321	-				-0.5
2,489,321	-				+1.2
2,489,333	-				+0.3
2,489,333	-				-0.1
2,489,372	+				-2.3
2,489,372	+				-1.2
2,489,538	-		MPMX20_02361	0.20	+0.7
2,489,576	+		MPMX20_02361	0.25	+1.3
2,489,576	+		MPMX20_02361	0.25	-0.1
2,489,576	+		MPMX20_02361	0.25	-0.2
2,489,584	-		MPMX20_02361	0.26	-0.3
2,489,602	-		MPMX20_02361	0.28	-0.6
2,489,602	-		MPMX20_02361	0.28	+1.4
2,489,602	-		MPMX20_02361	0.28	-0.5
2,489,608	+		MPMX20_02361	0.29	+0.2
2,489,616	-		MPMX20_02361	0.30	-0.0
2,489,630	+		MPMX20_02361	0.32	+1.0
2,489,723	+		MPMX20_02361	0.44	+0.7
2,489,723	+		MPMX20_02361	0.44	-0.8
2,489,723	+		MPMX20_02361	0.44	+0.2
2,489,723	+		MPMX20_02361	0.44	-1.2
2,489,723	+		MPMX20_02361	0.44	-1.2
2,489,731	-		MPMX20_02361	0.45	-1.3
2,489,731	-		MPMX20_02361	0.45	-0.5
2,489,731	-		MPMX20_02361	0.45	-1.0
2,489,731	-		MPMX20_02361	0.45	+0.2
2,489,785	+		MPMX20_02361	0.53	+0.4
2,489,787	+		MPMX20_02361	0.53	+0.8
2,489,789	+		MPMX20_02361	0.53	-0.5
2,489,789	+		MPMX20_02361	0.53	+0.9
2,489,793	-		MPMX20_02361	0.54	-2.4
2,489,793	-		MPMX20_02361	0.54	-2.9
2,489,795	-		MPMX20_02361	0.54	+2.0
2,489,795	-		MPMX20_02361	0.54	-0.2
2,489,795	-		MPMX20_02361	0.54	-1.2
2,489,797	-		MPMX20_02361	0.54	-0.3
2,489,853	-		MPMX20_02361	0.62	+1.3
2,489,856	-		MPMX20_02361	0.62	+0.8
2,489,892	+		MPMX20_02361	0.67	+0.7
2,489,975	-		MPMX20_02361	0.78	-0.2
2,490,034	+		MPMX20_02361	0.86	+0.8
2,490,042	-		MPMX20_02361	0.87	-2.5
2,490,048	+		MPMX20_02361	0.88	-0.5
2,490,075	+				-0.3
2,490,081	+				+0.1
2,490,089	-				-0.2
2,490,091	+				+0.3
2,490,100	+				+0.4
2,490,100	+				+1.7
2,490,108	-				+0.6
2,490,108	-				-2.7
2,490,141	-				+3.9
2,490,157	-				-0.5
2,490,157	-				-0.0
2,490,182	+				+0.0
2,490,214	+				+0.8
2,490,237	-				+0.5
2,490,292	+				-0.2
2,490,297	+				-1.5
2,490,297	+				-0.5
2,490,302	+				+1.8
2,490,302	+				+0.9
2,490,302	+				-0.8
2,490,302	+				+0.1
2,490,302	+				-0.8
2,490,302	+				-2.3
2,490,310	-				-0.3
2,490,310	-				+0.1
2,490,310	-				+1.0
2,490,310	-				-1.2
2,490,310	-				+0.8
2,490,310	-				+0.7
2,490,319	+				-1.7
2,490,385	-		MPMX20_02362	0.10	+1.0
2,490,388	+		MPMX20_02362	0.10	-0.4
2,490,435	+		MPMX20_02362	0.16	-0.1
2,490,448	+		MPMX20_02362	0.17	+0.5
2,490,517	+		MPMX20_02362	0.25	+0.4
2,490,582	+		MPMX20_02362	0.32	+0.1
2,490,582	+		MPMX20_02362	0.32	-1.1
2,490,582	+		MPMX20_02362	0.32	+2.3
2,490,592	+		MPMX20_02362	0.33	+0.6
2,490,600	-		MPMX20_02362	0.34	-2.3
2,490,600	-		MPMX20_02362	0.34	-1.3
2,490,654	-		MPMX20_02362	0.40	-0.1
2,490,664	+		MPMX20_02362	0.41	-0.2
2,490,750	-		MPMX20_02362	0.50	+0.5
2,490,775	-		MPMX20_02362	0.53	+6.6
2,490,782	+		MPMX20_02362	0.54	-2.3
2,490,822	+		MPMX20_02362	0.58	+0.5
2,490,822	+		MPMX20_02362	0.58	-0.2
2,490,848	-		MPMX20_02362	0.61	+0.2
2,490,853	+		MPMX20_02362	0.62	+1.4
2,490,861	-		MPMX20_02362	0.63	-2.2
2,490,861	-		MPMX20_02362	0.63	+1.6
2,490,888	+		MPMX20_02362	0.66	+0.4
2,490,936	-		MPMX20_02362	0.71	+0.5
2,490,952	+		MPMX20_02362	0.73	-1.0
2,490,952	+		MPMX20_02362	0.73	-0.6
2,490,952	+		MPMX20_02362	0.73	+0.6
2,490,952	+		MPMX20_02362	0.73	+0.5
2,490,958	-		MPMX20_02362	0.73	+1.1
2,490,960	-		MPMX20_02362	0.74	-2.3
2,490,960	-		MPMX20_02362	0.74	-2.3
2,490,963	+		MPMX20_02362	0.74	+1.4
2,491,007	-		MPMX20_02362	0.79	-1.8
2,491,011	+		MPMX20_02362	0.79	+0.4
2,491,058	-		MPMX20_02362	0.84	+0.8
2,491,063	+		MPMX20_02362	0.85	-0.5
2,491,086	+		MPMX20_02362	0.87	-1.9
2,491,093	-		MPMX20_02362	0.88	-0.1
2,491,162	+				+0.8
2,491,233	+				+1.1
2,491,313	-		MPMX20_02363	0.21	+0.4
2,491,334	-		MPMX20_02363	0.26	-0.2
2,491,336	+		MPMX20_02363	0.26	+1.1
2,491,344	-		MPMX20_02363	0.28	-1.0
2,491,344	-		MPMX20_02363	0.28	+0.0
2,491,344	-		MPMX20_02363	0.28	+0.2
2,491,346	+		MPMX20_02363	0.29	+0.1
2,491,349	-		MPMX20_02363	0.29	-1.8
2,491,354	-		MPMX20_02363	0.31	-0.9
2,491,414	+		MPMX20_02363	0.45	+1.8
2,491,436	-		MPMX20_02363	0.50	+0.1
2,491,440	+		MPMX20_02363	0.51	-0.6
2,491,450	+		MPMX20_02363	0.53	-1.1
2,491,458	-		MPMX20_02363	0.55	-0.2
2,491,499	-		MPMX20_02363	0.64	+1.4
2,491,556	-		MPMX20_02363	0.78	+0.4
2,491,582	-		MPMX20_02363	0.84	+3.7
2,491,612	+				+0.4
2,491,620	-				-1.3
2,491,632	-				+0.1
2,491,632	-				-0.3
2,491,632	-				+1.1
2,491,661	+				-1.9
2,491,677	+				-0.1
2,491,677	+				-1.4
2,491,684	+				-0.2
2,491,685	-				+0.6
2,491,691	-				+0.2
2,491,696	+				+1.3
2,491,704	-				+0.4
2,491,707	+				+0.7
2,491,707	+				+1.0
2,491,774	+				+0.6
2,491,782	-				+1.3
2,491,814	-				+2.2
2,491,844	-				+1.5
2,491,882	+		MPMX20_02364	0.11	-0.8
2,491,890	-		MPMX20_02364	0.12	+3.4
2,491,919	+		MPMX20_02364	0.15	+2.0
2,491,938	+		MPMX20_02364	0.17	-0.8
2,491,953	+		MPMX20_02364	0.18	+1.1
2,491,956	-		MPMX20_02364	0.18	+0.5
2,491,995	-		MPMX20_02364	0.23	+2.8
2,492,012	+		MPMX20_02364	0.24	-2.4
2,492,012	+		MPMX20_02364	0.24	+1.1
2,492,019	-		MPMX20_02364	0.25	-1.3
2,492,078	+		MPMX20_02364	0.31	+1.6
2,492,082	+		MPMX20_02364	0.32	-1.2
2,492,109	+		MPMX20_02364	0.34	-0.7
2,492,111	+		MPMX20_02364	0.35	-0.9
2,492,143	+		MPMX20_02364	0.38	-0.7
2,492,166	+		MPMX20_02364	0.40	-2.9
2,492,166	+		MPMX20_02364	0.40	-1.3
2,492,166	+		MPMX20_02364	0.40	+0.8
2,492,168	-		MPMX20_02364	0.41	+0.1
2,492,174	-		MPMX20_02364	0.41	+0.1
2,492,174	-		MPMX20_02364	0.41	-0.8
2,492,175	-		MPMX20_02364	0.41	-0.5
2,492,184	-		MPMX20_02364	0.42	+0.7