Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02201

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4
2,309,472	-				+0.8
2,309,490	+				+2.3
2,309,498	-				+0.5
2,309,520	-				+0.4
2,309,520	-				-0.4
2,309,535	+				+1.4
2,309,535	+				+0.2
2,309,535	+				-0.3
2,309,535	+				+0.4
2,309,543	-				+0.2
2,309,567	-				+0.3
2,309,583	-				-2.9
2,309,635	-				-0.0
2,309,635	-				+1.4
2,309,653	+				+0.7
2,309,661	-				+1.6
2,309,723	+				+0.4
2,309,798	+				+0.2
2,309,798	+				+1.2
2,309,798	+				+1.2
2,309,812	+				-1.4
2,309,820	-				+0.4
2,309,856	+				+1.7
2,309,881	+				+0.5
2,309,891	+				+0.0
2,309,911	-				+1.2
2,309,921	-				+0.3
2,309,951	+				-3.1
2,310,052	+				+0.4
2,310,072	+				-0.5
2,310,122	-				-0.2
2,310,122	-				+0.6
2,310,156	+				-1.2
2,310,156	+				+1.5
2,310,164	-				+2.3
2,310,278	+				-0.3
2,310,278	+				-1.9
2,310,278	+				-0.0
2,310,334	+				+1.5
2,310,352	+				+0.2
2,310,389	-				+1.4
2,310,515	-				-0.1
2,310,515	-				-1.5
2,310,530	-				+0.6
2,310,561	+				+1.4
2,310,579	+				+0.0
2,310,660	-		MPMX20_02201	0.10	-0.9
2,310,666	-		MPMX20_02201	0.11	+2.2
2,310,674	+		MPMX20_02201	0.11	-1.4
2,310,690	+		MPMX20_02201	0.12	-0.1
2,310,694	+		MPMX20_02201	0.12	+0.0
2,310,694	+		MPMX20_02201	0.12	+0.7
2,310,694	+		MPMX20_02201	0.12	-0.3
2,310,694	+		MPMX20_02201	0.12	+0.4
2,310,701	-		MPMX20_02201	0.12	-2.0
2,310,702	-		MPMX20_02201	0.12	-1.6
2,310,702	-		MPMX20_02201	0.12	-0.6
2,310,702	-		MPMX20_02201	0.12	-0.7
2,310,702	-		MPMX20_02201	0.12	-1.0
2,310,702	-		MPMX20_02201	0.12	+0.6
2,310,702	-		MPMX20_02201	0.12	+2.1
2,310,702	-		MPMX20_02201	0.12	-0.2
2,310,702	-		MPMX20_02201	0.12	+0.9
2,310,707	+		MPMX20_02201	0.12	-1.6
2,310,715	-		MPMX20_02201	0.13	-0.1
2,310,717	-		MPMX20_02201	0.13	-2.7
2,310,758	-		MPMX20_02201	0.15	+0.3
2,310,760	-		MPMX20_02201	0.15	-1.5
2,310,801	+		MPMX20_02201	0.17	+1.0
2,310,824	+		MPMX20_02201	0.18	+0.7
2,310,827	-		MPMX20_02201	0.18	-0.1
2,310,829	+		MPMX20_02201	0.18	+0.6
2,310,849	-		MPMX20_02201	0.19	+2.2
2,310,880	+		MPMX20_02201	0.20	-0.6
2,311,013	-		MPMX20_02201	0.26	-2.4
2,311,040	+		MPMX20_02201	0.27	-0.6
2,311,049	-		MPMX20_02201	0.28	-0.0
2,311,049	-		MPMX20_02201	0.28	+1.0
2,311,049	-		MPMX20_02201	0.28	+0.1
2,311,049	-		MPMX20_02201	0.28	+1.6
2,311,049	-		MPMX20_02201	0.28	+0.4
2,311,049	-		MPMX20_02201	0.28	+0.2
2,311,051	+		MPMX20_02201	0.28	+1.5
2,311,116	-		MPMX20_02201	0.31	-2.7
2,311,159	-		MPMX20_02201	0.33	+0.1
2,311,174	-		MPMX20_02201	0.33	-0.1
2,311,211	+		MPMX20_02201	0.35	+1.4
2,311,268	+		MPMX20_02201	0.37	-0.1
2,311,304	-		MPMX20_02201	0.39	+0.4
2,311,332	-		MPMX20_02201	0.40	-0.0
2,311,380	+		MPMX20_02201	0.42	+1.8
2,311,401	-		MPMX20_02201	0.43	-1.3
2,311,503	-		MPMX20_02201	0.48	+0.2
2,311,505	+		MPMX20_02201	0.48	+0.1
2,311,513	-		MPMX20_02201	0.48	+0.6
2,311,513	-		MPMX20_02201	0.48	+0.6
2,311,515	+		MPMX20_02201	0.48	+0.9
2,311,515	+		MPMX20_02201	0.48	-1.0
2,311,523	-		MPMX20_02201	0.49	+0.4
2,311,554	-		MPMX20_02201	0.50	+0.8
2,311,559	-		MPMX20_02201	0.50	+1.0
2,311,614	-		MPMX20_02201	0.53	-2.0
2,311,734	-		MPMX20_02201	0.58	+0.2
2,311,744	-		MPMX20_02201	0.58	+0.1
2,311,875	-		MPMX20_02201	0.64	-0.0
2,311,875	-		MPMX20_02201	0.64	-0.9
2,311,885	-		MPMX20_02201	0.65	-0.4
2,311,965	+		MPMX20_02201	0.68	+1.1
2,311,983	+		MPMX20_02201	0.69	-0.5
2,312,119	+		MPMX20_02201	0.75	+0.3
2,312,193	-		MPMX20_02201	0.78	+0.0
2,312,250	+		MPMX20_02201	0.81	-0.0
2,312,252	+		MPMX20_02201	0.81	+0.6
2,312,252	+		MPMX20_02201	0.81	+1.3
2,312,258	-		MPMX20_02201	0.81	+0.1
2,312,260	-		MPMX20_02201	0.81	+0.4
2,312,263	-		MPMX20_02201	0.82	+2.5
2,312,331	-		MPMX20_02201	0.85	+0.4
2,312,381	-		MPMX20_02201	0.87	-1.0
2,312,381	-		MPMX20_02201	0.87	+0.4
2,312,432	-		MPMX20_02201	0.89	-2.4
2,312,587	+				-0.2
2,312,587	+				+1.1
2,312,602	+				-0.2
2,312,664	-				-0.6
2,312,674	-				-0.4
2,312,688	-				+0.1
2,312,689	-				-3.0
2,312,732	+				-0.2
2,312,781	+				-0.2
2,312,789	-				+1.0
2,312,791	+				-0.4
2,312,796	+		MPMX20_02202	0.10	+0.1
2,312,804	-		MPMX20_02202	0.11	+0.5
2,312,804	-		MPMX20_02202	0.11	+0.8
2,312,806	+		MPMX20_02202	0.11	+0.3
2,312,862	+		MPMX20_02202	0.16	+1.6
2,312,862	+		MPMX20_02202	0.16	+0.2
2,312,892	-		MPMX20_02202	0.18	-1.0
2,312,919	+		MPMX20_02202	0.21	+0.4
2,313,001	+		MPMX20_02202	0.28	+0.4
2,313,072	+		MPMX20_02202	0.34	-0.7
2,313,103	+		MPMX20_02202	0.36	-1.5
2,313,103	+		MPMX20_02202	0.36	-0.9
2,313,103	+		MPMX20_02202	0.36	+0.5
2,313,111	-		MPMX20_02202	0.37	-0.6
2,313,111	-		MPMX20_02202	0.37	+1.6
2,313,111	-		MPMX20_02202	0.37	+1.2
2,313,135	+		MPMX20_02202	0.39	-0.8
2,313,142	-		MPMX20_02202	0.40	-0.9
2,313,143	-		MPMX20_02202	0.40	-1.6
2,313,144	+		MPMX20_02202	0.40	+0.4
2,313,162	+		MPMX20_02202	0.41	-0.6
2,313,164	-		MPMX20_02202	0.42	-0.9
2,313,222	+		MPMX20_02202	0.47	-0.4
2,313,231	-		MPMX20_02202	0.47	+1.0
2,313,232	+		MPMX20_02202	0.47	+0.4
2,313,232	-		MPMX20_02202	0.47	-0.6
2,313,308	+		MPMX20_02202	0.54	-0.9
2,313,337	+		MPMX20_02202	0.56	+0.8
2,313,433	+		MPMX20_02202	0.64	+0.4
2,313,440	+		MPMX20_02202	0.65	+0.1
2,313,449	-		MPMX20_02202	0.66	+0.4
2,313,472	+		MPMX20_02202	0.68	+1.4
2,313,475	+		MPMX20_02202	0.68	-1.5
2,313,480	+		MPMX20_02202	0.68	+0.6
2,313,480	+		MPMX20_02202	0.68	+0.6
2,313,492	-		MPMX20_02202	0.69	-1.5
2,313,492	-		MPMX20_02202	0.69	-2.6
2,313,540	+		MPMX20_02202	0.74	-1.6
2,313,553	-		MPMX20_02202	0.75	-0.6
2,313,563	+		MPMX20_02202	0.76	+0.4
2,313,568	+		MPMX20_02202	0.76	+1.7
2,313,568	+		MPMX20_02202	0.76	-2.0
2,313,581	+		MPMX20_02202	0.77	-0.3
2,313,582	+		MPMX20_02202	0.77	+0.7
2,313,582	+		MPMX20_02202	0.77	+0.8
2,313,582	+		MPMX20_02202	0.77	-0.2
2,313,582	+		MPMX20_02202	0.77	+0.4
2,313,589	-		MPMX20_02202	0.78	-3.5
2,313,589	-		MPMX20_02202	0.78	-0.4
2,313,589	-		MPMX20_02202	0.78	-0.6
2,313,590	-		MPMX20_02202	0.78	-2.5
2,313,590	-		MPMX20_02202	0.78	-2.0
2,313,605	+		MPMX20_02202	0.79	+0.7
2,313,605	+		MPMX20_02202	0.79	-0.4
2,313,605	+		MPMX20_02202	0.79	-0.1
2,313,605	+		MPMX20_02202	0.79	-0.9
2,313,605	+		MPMX20_02202	0.79	-0.2
2,313,605	+		MPMX20_02202	0.79	-0.3
2,313,605	+		MPMX20_02202	0.79	-0.6
2,313,605	+		MPMX20_02202	0.79	+0.4
2,313,605	+		MPMX20_02202	0.79	-1.4
2,313,605	+		MPMX20_02202	0.79	+0.4
2,313,607	+		MPMX20_02202	0.79	-0.5
2,313,613	+		MPMX20_02202	0.80	+1.2
2,313,642	+		MPMX20_02202	0.82	-0.1
2,313,643	+		MPMX20_02202	0.82	-0.2
2,313,643	+		MPMX20_02202	0.82	+1.2
2,313,644	+		MPMX20_02202	0.82	+1.1
2,313,649	+		MPMX20_02202	0.83	+0.4
2,313,653	+		MPMX20_02202	0.83	-0.9
2,313,655	+		MPMX20_02202	0.83	-1.3
2,313,655	+		MPMX20_02202	0.83	-1.1
2,313,668	+		MPMX20_02202	0.84	-0.6
2,313,675	+		MPMX20_02202	0.85	+1.0