Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01086

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4
1,145,735	+		MPMX20_01084	0.83	-1.8
1,145,742	-		MPMX20_01084	0.83	-0.1
1,145,743	-		MPMX20_01084	0.83	-0.4
1,145,743	-		MPMX20_01084	0.83	-0.2
1,145,743	-		MPMX20_01084	0.83	+1.9
1,145,745	+		MPMX20_01084	0.83	+0.3
1,145,757	+		MPMX20_01084	0.84	+0.4
1,145,768	+		MPMX20_01084	0.84	-0.5
1,145,770	-		MPMX20_01084	0.84	-1.5
1,145,867	-		MPMX20_01084	0.88	+0.8
1,145,892	+		MPMX20_01084	0.89	+0.5
1,145,892	+		MPMX20_01084	0.89	+0.5
1,145,900	-		MPMX20_01084	0.90	-2.1
1,145,900	-		MPMX20_01084	0.90	-1.4
1,145,927	+				+1.7
1,145,935	-				-2.2
1,145,962	+				-0.6
1,145,970	-				+0.1
1,145,970	-				-1.1
1,145,975	-				-0.3
1,145,982	-				+3.6
1,146,050	-				-1.9
1,146,054	+				+0.4
1,146,054	+				+0.7
1,146,054	+				-1.1
1,146,054	+				-0.3
1,146,054	+				-0.6
1,146,062	-				-0.1
1,146,062	-				+0.1
1,146,062	-				-0.1
1,146,062	-				+0.5
1,146,064	+				+0.4
1,146,064	+				-1.6
1,146,064	+				-0.9
1,146,064	+				-0.9
1,146,069	+				+0.4
1,146,072	-				-0.7
1,146,072	-				-0.3
1,146,072	-				-1.7
1,146,072	-				-0.4
1,146,079	-				+0.3
1,146,081	+				+0.9
1,146,116	+				+0.9
1,146,122	-				+0.9
1,146,141	+				-0.1
1,146,149	-				-2.0
1,146,184	+				+0.9
1,146,184	+				-1.6
1,146,184	+				+0.4
1,146,200	+				+0.2
1,146,200	+				-1.1
1,146,253	+				+0.4
1,146,253	+				+0.7
1,146,331	+		MPMX20_01085	0.15	-0.4
1,146,337	+		MPMX20_01085	0.17	-2.5
1,146,440	-		MPMX20_01085	0.42	-0.2
1,146,500	-		MPMX20_01085	0.56	-0.4
1,146,546	+		MPMX20_01085	0.68	+0.0
1,146,599	-		MPMX20_01085	0.81	+0.2
1,146,607	+		MPMX20_01085	0.82	+1.1
1,146,609	+		MPMX20_01085	0.83	-0.9
1,146,675	-				+2.3
1,146,682	+				-0.1
1,146,682	+				+0.7
1,146,695	+				-1.4
1,146,744	-		MPMX20_01086	0.16	-0.0
1,146,764	+		MPMX20_01086	0.21	+0.3
1,146,772	-		MPMX20_01086	0.22	-1.7
1,146,786	+		MPMX20_01086	0.25	+0.6
1,146,857	+		MPMX20_01086	0.41	-1.7
1,146,899	+		MPMX20_01086	0.50	+0.5
1,146,899	+		MPMX20_01086	0.50	-1.1
1,146,944	-		MPMX20_01086	0.60	+0.7
1,146,962	+		MPMX20_01086	0.64	+0.1
1,146,967	+		MPMX20_01086	0.65	-0.1
1,146,975	-		MPMX20_01086	0.67	+0.5
1,146,980	-		MPMX20_01086	0.68	+0.3
1,146,980	-		MPMX20_01086	0.68	+1.4
1,146,980	-		MPMX20_01086	0.68	+0.0
1,147,000	-		MPMX20_01086	0.72	-0.8
1,147,021	-		MPMX20_01086	0.77	-0.7
1,147,082	+				+1.4
1,147,303	-		MPMX20_01087	0.20	-0.7
1,147,303	-		MPMX20_01087	0.20	-2.3
1,147,303	-		MPMX20_01087	0.20	+1.5
1,147,325	+		MPMX20_01087	0.22	-1.0
1,147,402	-		MPMX20_01087	0.30	-3.5
1,147,459	+		MPMX20_01087	0.37	-0.2
1,147,491	+		MPMX20_01087	0.40	-1.3
1,147,514	-		MPMX20_01087	0.43	-2.0
1,147,540	-		MPMX20_01087	0.45	-0.4
1,147,586	-		MPMX20_01087	0.50	+0.6
1,147,595	-		MPMX20_01087	0.51	-2.1
1,147,630	+		MPMX20_01087	0.55	-0.3
1,147,654	-		MPMX20_01087	0.58	+0.3
1,147,669	+		MPMX20_01087	0.60	-1.0
1,147,669	+		MPMX20_01087	0.60	+0.3
1,147,677	-		MPMX20_01087	0.60	-0.3
1,147,677	-		MPMX20_01087	0.60	+1.5
1,147,677	-		MPMX20_01087	0.60	+0.4
1,147,677	-		MPMX20_01087	0.60	+1.1
1,147,677	-		MPMX20_01087	0.60	+0.2
1,147,686	+		MPMX20_01087	0.61	+0.3
1,147,711	-		MPMX20_01087	0.64	+0.2
1,147,761	+		MPMX20_01087	0.70	-0.4
1,147,762	+		MPMX20_01087	0.70	+0.3
1,147,771	+		MPMX20_01087	0.71	+3.0
1,147,771	+		MPMX20_01087	0.71	-2.3
1,147,771	+		MPMX20_01087	0.71	+0.5
1,147,779	-		MPMX20_01087	0.72	-0.7
1,147,779	-		MPMX20_01087	0.72	-1.1
1,147,779	-		MPMX20_01087	0.72	-0.0
1,147,779	-		MPMX20_01087	0.72	+0.4
1,147,779	-		MPMX20_01087	0.72	-0.6
1,147,779	-		MPMX20_01087	0.72	-2.2
1,147,794	-		MPMX20_01087	0.73	+1.0
1,147,803	+		MPMX20_01087	0.74	+1.1
1,147,940	+		MPMX20_01087	0.89	-0.4
1,147,940	+		MPMX20_01087	0.89	-1.7
1,147,954	+				-0.1
1,147,958	-				+0.4
1,147,992	+				-1.0
1,148,064	+				+0.5
1,148,072	-				+1.2