Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04240

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4
4,423,391	-				-1.4
4,423,527	-		MPMX20_04239	0.27	-0.7
4,423,541	+		MPMX20_04239	0.28	-0.6
4,423,682	-		MPMX20_04239	0.48	-1.0
4,423,770	-		MPMX20_04239	0.60	-1.9
4,423,819	-		MPMX20_04239	0.67	-2.3
4,423,891	-		MPMX20_04239	0.77	-0.2
4,423,891	-		MPMX20_04239	0.77	-1.3
4,423,892	-		MPMX20_04239	0.77	-1.9
4,423,945	-		MPMX20_04239	0.84	-2.1
4,423,945	-		MPMX20_04239	0.84	-1.8
4,423,945	-		MPMX20_04239	0.84	-1.2
4,423,945	-		MPMX20_04239	0.84	+0.3
4,423,945	-		MPMX20_04239	0.84	-0.8
4,423,945	-		MPMX20_04239	0.84	-1.7
4,423,999	-				-1.1
4,424,045	-				-2.0
4,424,093	-				-2.2
4,424,105	+				-1.4
4,424,138	-				+2.8
4,424,152	-				+1.4
4,424,198	+				+0.8
4,424,206	-				+0.8
4,424,294	+				-0.8
4,424,294	+				+0.7
4,424,294	+				-0.5
4,424,302	-				-0.1
4,424,302	-				-0.8
4,424,302	-				+0.1
4,424,310	+		MPMX20_04240	0.10	-1.1
4,424,328	+		MPMX20_04240	0.13	-1.7
4,424,328	+		MPMX20_04240	0.13	-1.1
4,424,328	+		MPMX20_04240	0.13	-0.4
4,424,328	+		MPMX20_04240	0.13	+0.2
4,424,336	-		MPMX20_04240	0.14	-1.4
4,424,343	-		MPMX20_04240	0.14	-1.4
4,424,472	-		MPMX20_04240	0.30	+0.5
4,424,472	-		MPMX20_04240	0.30	+1.0
4,424,478	+		MPMX20_04240	0.31	-0.2
4,424,478	+		MPMX20_04240	0.31	+0.8
4,424,478	+		MPMX20_04240	0.31	+0.1
4,424,486	+		MPMX20_04240	0.32	+0.7
4,424,486	+		MPMX20_04240	0.32	-0.5
4,424,486	+		MPMX20_04240	0.32	-0.7
4,424,486	+		MPMX20_04240	0.32	+0.6
4,424,494	-		MPMX20_04240	0.33	+1.2
4,424,494	-		MPMX20_04240	0.33	-0.8
4,424,554	+		MPMX20_04240	0.40	-0.2
4,424,554	+		MPMX20_04240	0.40	+0.4
4,424,562	-		MPMX20_04240	0.41	-0.6
4,424,562	-		MPMX20_04240	0.41	+0.0
4,424,599	-		MPMX20_04240	0.46	-1.4
4,424,604	-		MPMX20_04240	0.46	-1.0
4,424,650	-		MPMX20_04240	0.52	+0.0
4,424,653	+		MPMX20_04240	0.52	+0.2
4,424,711	+		MPMX20_04240	0.59	+1.0
4,424,758	+		MPMX20_04240	0.65	+0.1
4,424,796	-		MPMX20_04240	0.70	-0.3
4,424,814	-		MPMX20_04240	0.72	-1.2
4,424,816	-		MPMX20_04240	0.72	-0.6
4,424,880	-		MPMX20_04240	0.80	+0.2
4,424,925	+		MPMX20_04240	0.85	+1.1
4,424,927	+		MPMX20_04240	0.86	-0.2
4,424,933	-		MPMX20_04240	0.86	-0.2
4,424,935	+		MPMX20_04240	0.86	+1.3
4,424,940	-		MPMX20_04240	0.87	-0.4
4,424,953	+		MPMX20_04240	0.89	-0.5
4,424,963	+				-1.5
4,424,972	+				+0.2
4,424,977	+				-0.9
4,424,980	-				-0.6
4,425,021	+				-0.2
4,425,021	+				-0.8
4,425,026	+				+1.3
4,425,034	-				-0.0
4,425,034	-				+0.8
4,425,058	+				-0.3
4,425,058	+				+1.0
4,425,058	+				-0.6
4,425,060	-				+0.7
4,425,066	-				-1.2
4,425,076	-				+0.5
4,425,086	+				+1.4
4,425,104	+				-0.1
4,425,106	+				-1.0
4,425,106	+				+0.2
4,425,148	-				+1.4
4,425,204	-				+0.6
4,425,211	-				+2.0
4,425,217	+				-0.6
4,425,233	-				+0.2
4,425,288	+				+0.6
4,425,311	+		MPMX20_04241	0.13	+0.5
4,425,360	+		MPMX20_04241	0.35	+0.2
4,425,363	+		MPMX20_04241	0.37	+1.1
4,425,371	-		MPMX20_04241	0.40	-0.4
4,425,412	+		MPMX20_04241	0.59	+0.2
4,425,451	-		MPMX20_04241	0.77	+0.4
4,425,490	+				-2.8
4,425,490	+				+0.1
4,425,490	+				+4.1
4,425,490	-				-0.9
4,425,566	+				-0.5
4,425,571	+				-1.6
4,425,590	+				-0.6
4,425,598	-				-1.6
4,425,598	-				-1.0
4,425,598	-				+1.8
4,425,598	-				-0.3
4,425,598	-				-1.0
4,425,598	-				-1.2
4,425,598	-				+0.2
4,425,806	+		MPMX20_04242	0.42	+2.2
4,425,926	-		MPMX20_04242	0.63	-0.4