Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04039

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4
4,235,999	+		MPMX20_04038	0.15	+0.7
4,236,236	+		MPMX20_04038	0.44	-1.3
4,236,236	+		MPMX20_04038	0.44	-0.6
4,236,244	-		MPMX20_04038	0.45	-2.5
4,236,244	-		MPMX20_04038	0.45	-3.3
4,236,244	-		MPMX20_04038	0.45	-2.5
4,236,244	-		MPMX20_04038	0.45	-1.3
4,236,244	-		MPMX20_04038	0.45	-2.1
4,236,309	-		MPMX20_04038	0.53	-2.8
4,236,325	-		MPMX20_04038	0.55	-1.1
4,236,325	-		MPMX20_04038	0.55	-1.1
4,236,373	+		MPMX20_04038	0.61	-2.3
4,236,381	-		MPMX20_04038	0.62	-0.3
4,236,411	-		MPMX20_04038	0.66	-0.7
4,236,416	+		MPMX20_04038	0.66	-1.0
4,236,441	-		MPMX20_04038	0.69	-2.3
4,236,452	+		MPMX20_04038	0.71	+1.7
4,236,452	+		MPMX20_04038	0.71	-2.3
4,236,508	+		MPMX20_04038	0.78	-2.2
4,236,591	-		MPMX20_04038	0.88	-2.6
4,236,601	-		MPMX20_04038	0.89	-0.4
4,236,637	-				-1.6
4,236,692	-				-2.6
4,236,807	-				-1.0
4,236,937	-				-0.2
4,236,994	+				-0.9
4,237,057	+				-0.5
4,237,060	-				+0.3
4,237,086	+		MPMX20_04039	0.11	+0.5
4,237,170	+		MPMX20_04039	0.18	-0.1
4,237,219	-		MPMX20_04039	0.21	-1.1
4,237,271	+		MPMX20_04039	0.25	-0.4
4,237,276	+		MPMX20_04039	0.26	-0.8
4,237,290	+		MPMX20_04039	0.27	+0.5
4,237,293	-		MPMX20_04039	0.27	+0.3
4,237,313	+		MPMX20_04039	0.29	-0.4
4,237,332	+		MPMX20_04039	0.30	+0.8
4,237,434	+		MPMX20_04039	0.38	-0.1
4,237,439	+		MPMX20_04039	0.38	+0.6
4,237,447	-		MPMX20_04039	0.39	+0.5
4,237,447	-		MPMX20_04039	0.39	-0.1
4,237,447	-		MPMX20_04039	0.39	+0.6
4,237,447	-		MPMX20_04039	0.39	-0.4
4,237,452	-		MPMX20_04039	0.39	+0.4
4,237,452	-		MPMX20_04039	0.39	-0.0
4,237,480	-		MPMX20_04039	0.42	+0.5
4,237,527	-		MPMX20_04039	0.45	-0.0
4,237,539	+		MPMX20_04039	0.46	-0.2
4,237,548	-		MPMX20_04039	0.47	+1.9
4,237,560	-		MPMX20_04039	0.48	-0.8
4,237,626	-		MPMX20_04039	0.53	-0.8
4,237,646	-		MPMX20_04039	0.54	+0.4
4,237,697	+		MPMX20_04039	0.58	+0.7
4,237,728	+		MPMX20_04039	0.61	+0.8
4,237,786	+		MPMX20_04039	0.65	+0.4
4,237,794	-		MPMX20_04039	0.66	-0.3
4,237,802	+		MPMX20_04039	0.66	-0.7
4,237,802	+		MPMX20_04039	0.66	+0.5
4,237,809	+		MPMX20_04039	0.67	-1.3
4,237,809	+		MPMX20_04039	0.67	-0.1
4,237,809	+		MPMX20_04039	0.67	+0.0
4,237,809	+		MPMX20_04039	0.67	+1.0
4,237,809	+		MPMX20_04039	0.67	-0.4
4,237,809	+		MPMX20_04039	0.67	+0.6
4,237,810	-		MPMX20_04039	0.67	+4.1
4,237,810	-		MPMX20_04039	0.67	-0.9
4,237,817	-		MPMX20_04039	0.68	+0.6
4,237,817	-		MPMX20_04039	0.68	-0.6
4,237,817	-		MPMX20_04039	0.68	+0.2
4,237,817	-		MPMX20_04039	0.68	-0.1
4,237,817	-		MPMX20_04039	0.68	-0.3
4,237,817	-		MPMX20_04039	0.68	-0.8
4,237,819	+		MPMX20_04039	0.68	-0.0
4,237,856	+		MPMX20_04039	0.71	-1.6
4,237,878	+		MPMX20_04039	0.72	-0.4
4,237,883	+		MPMX20_04039	0.73	-0.6
4,237,886	-		MPMX20_04039	0.73	-1.7
4,237,896	-		MPMX20_04039	0.74	+0.0
4,237,896	-		MPMX20_04039	0.74	-0.7
4,237,987	-		MPMX20_04039	0.81	+0.4
4,237,988	-		MPMX20_04039	0.81	+0.0
4,237,988	-		MPMX20_04039	0.81	-1.1
4,237,988	-		MPMX20_04039	0.81	-0.6
4,238,011	-		MPMX20_04039	0.83	-0.1
4,238,084	+		MPMX20_04039	0.88	-0.1
4,238,158	+				-0.6
4,238,192	-				-0.1
4,238,268	+				+0.8
4,238,268	+				+0.6
4,238,276	-				-0.1
4,238,334	-		MPMX20_04040	0.16	+0.2
4,238,349	-		MPMX20_04040	0.20	+2.3
4,238,349	-		MPMX20_04040	0.20	+0.2
4,238,359	-		MPMX20_04040	0.22	+0.9
4,238,539	-		MPMX20_04040	0.60	+0.7
4,238,555	-		MPMX20_04040	0.63	+0.1
4,238,703	+				+0.5
4,238,714	+				+0.0
4,238,721	-				+1.3
4,238,721	-				-0.3
4,238,750	-				-0.6
4,238,794	+				+0.2
4,238,794	+				+0.5
4,238,813	+				+0.7
4,238,821	+		MPMX20_04041	0.10	-0.8
4,238,821	-		MPMX20_04041	0.10	+2.7
4,238,831	+		MPMX20_04041	0.12	+0.4
4,238,839	-		MPMX20_04041	0.13	+0.6
4,238,839	-		MPMX20_04041	0.13	+1.2
4,238,858	+		MPMX20_04041	0.15	-1.1
4,238,863	+		MPMX20_04041	0.16	-1.4
4,238,866	-		MPMX20_04041	0.16	-1.3
4,238,918	+		MPMX20_04041	0.23	-1.3
4,238,921	-		MPMX20_04041	0.23	+0.8
4,238,921	-		MPMX20_04041	0.23	+1.1
4,239,090	+		MPMX20_04041	0.45	+0.9