Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03684

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4
3,879,484	+		MPMX20_03683	0.75	-1.8
3,879,787	-		MPMX20_03683	0.83	+1.7
3,880,214	-				-0.3
3,880,283	-				+0.7
3,880,296	-				-1.1
3,880,354	+				-1.8
3,880,362	-				+0.7
3,880,376	+				-2.6
3,880,427	+				-3.3
3,880,427	+				+0.2
3,880,435	-				-1.6
3,880,435	-				-0.9
3,880,435	-				-0.9
3,880,450	+				-0.1
3,880,480	-				-0.8
3,880,636	+				-0.2
3,880,644	-				+0.7
3,880,705	+		MPMX20_03684	0.11	+0.4
3,880,778	+		MPMX20_03684	0.14	-1.1
3,880,792	+		MPMX20_03684	0.14	-1.2
3,880,817	+		MPMX20_03684	0.15	-1.8
3,880,853	+		MPMX20_03684	0.16	-1.0
3,880,879	+		MPMX20_03684	0.17	-2.3
3,880,881	+		MPMX20_03684	0.17	+0.5
3,880,884	-		MPMX20_03684	0.18	-0.8
3,880,922	+		MPMX20_03684	0.19	-1.8
3,880,927	+		MPMX20_03684	0.19	-0.3
3,880,927	+		MPMX20_03684	0.19	-2.5
3,880,952	-		MPMX20_03684	0.20	-1.3
3,880,952	-		MPMX20_03684	0.20	+0.4
3,880,999	-		MPMX20_03684	0.22	+2.7
3,881,118	+		MPMX20_03684	0.26	+0.4
3,881,126	-		MPMX20_03684	0.26	-0.6
3,881,126	-		MPMX20_03684	0.26	-1.8
3,881,167	-		MPMX20_03684	0.27	-2.3
3,881,190	-		MPMX20_03684	0.28	-1.5
3,881,203	+		MPMX20_03684	0.29	-0.7
3,881,212	+		MPMX20_03684	0.29	-1.5
3,881,222	+		MPMX20_03684	0.29	-1.1
3,881,222	+		MPMX20_03684	0.29	-1.6
3,881,295	+		MPMX20_03684	0.32	-1.0
3,881,297	+		MPMX20_03684	0.32	-0.7
3,881,305	-		MPMX20_03684	0.32	-1.1
3,881,312	-		MPMX20_03684	0.32	-1.0
3,881,312	-		MPMX20_03684	0.32	+0.1
3,881,354	-		MPMX20_03684	0.34	-1.4
3,881,401	-		MPMX20_03684	0.35	-1.9
3,881,414	-		MPMX20_03684	0.36	-0.0
3,881,414	-		MPMX20_03684	0.36	-0.3
3,881,422	-		MPMX20_03684	0.36	+0.4
3,881,431	+		MPMX20_03684	0.36	-1.2
3,881,433	+		MPMX20_03684	0.37	-0.3
3,881,441	-		MPMX20_03684	0.37	-0.9
3,881,445	+		MPMX20_03684	0.37	+0.3
3,881,645	+		MPMX20_03684	0.44	+0.1
3,881,668	+		MPMX20_03684	0.45	-1.1
3,881,715	+		MPMX20_03684	0.46	-0.7
3,881,807	+		MPMX20_03684	0.50	-0.5
3,881,815	-		MPMX20_03684	0.50	+0.7
3,881,815	-		MPMX20_03684	0.50	-0.0
3,881,885	+		MPMX20_03684	0.52	-0.2
3,881,885	+		MPMX20_03684	0.52	-0.3
3,881,885	+		MPMX20_03684	0.52	-0.4
3,881,892	-		MPMX20_03684	0.52	-0.9
3,881,930	+		MPMX20_03684	0.54	-1.6
3,881,946	+		MPMX20_03684	0.54	-1.7
3,881,995	+		MPMX20_03684	0.56	-0.3
3,882,010	-		MPMX20_03684	0.57	-0.0
3,882,096	+		MPMX20_03684	0.60	-1.1
3,882,148	-		MPMX20_03684	0.61	-1.2
3,882,258	+		MPMX20_03684	0.65	-2.5
3,882,295	-		MPMX20_03684	0.66	-2.8
3,882,312	-		MPMX20_03684	0.67	-0.6
3,882,312	-		MPMX20_03684	0.67	-1.1
3,882,361	-		MPMX20_03684	0.69	-0.1
3,882,363	+		MPMX20_03684	0.69	+0.1
3,882,389	+		MPMX20_03684	0.70	+1.4
3,882,492	+		MPMX20_03684	0.73	-2.1
3,882,564	+		MPMX20_03684	0.76	+0.1
3,882,619	+		MPMX20_03684	0.78	-1.7
3,882,619	+		MPMX20_03684	0.78	-1.4
3,882,624	+		MPMX20_03684	0.78	-0.2
3,882,627	-		MPMX20_03684	0.78	-1.8
3,882,690	+		MPMX20_03684	0.80	-1.0
3,882,699	-		MPMX20_03684	0.80	+0.7
3,882,705	+		MPMX20_03684	0.81	-3.6
3,882,742	+		MPMX20_03684	0.82	-0.6
3,882,749	+		MPMX20_03684	0.82	-1.0
3,882,750	-		MPMX20_03684	0.82	-0.5
3,882,752	-		MPMX20_03684	0.82	-1.8
3,882,752	-		MPMX20_03684	0.82	-0.3
3,882,835	+		MPMX20_03684	0.85	-0.6
3,882,848	-		MPMX20_03684	0.86	+1.2
3,882,857	+		MPMX20_03684	0.86	-0.5
3,882,857	+		MPMX20_03684	0.86	-2.0
3,882,905	-		MPMX20_03684	0.88	-1.4
3,882,988	+				-0.3
3,882,996	-				-0.6
3,883,005	+				+0.2
3,883,184	+				-0.5
3,883,188	+				-1.2
3,883,196	-				-1.0
3,883,207	-				-1.7
3,883,248	+				-0.9
3,883,399	+				+0.8
3,883,399	+				-0.2
3,883,399	+				-0.5
3,883,407	-				-0.0
3,883,407	-				+0.6
3,883,407	-				-0.2
3,883,412	-				-0.6
3,883,440	-				-0.1
3,883,807	+		MPMX20_03685	0.12	+0.7
3,883,909	+		MPMX20_03685	0.15	+0.1
3,883,975	+		MPMX20_03685	0.17	-1.1
3,884,118	-		MPMX20_03685	0.21	+0.1
3,884,150	-		MPMX20_03685	0.22	-0.6