Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03519

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4
3,703,107	-				+2.0
3,703,107	-				-1.4
3,703,107	-				+0.4
3,703,107	-				-0.4
3,703,107	-				+1.3
3,703,117	-				+0.5
3,703,128	-				-1.0
3,703,133	-				-0.1
3,703,135	+				+0.2
3,703,143	-				+0.6
3,703,159	+				-0.1
3,703,159	+				-2.4
3,703,167	-				+1.3
3,703,242	-		MPMX20_03517	0.30	-1.7
3,703,254	+		MPMX20_03517	0.34	-0.8
3,703,364	-		MPMX20_03517	0.66	-0.4
3,703,404	+		MPMX20_03517	0.77	+0.6
3,703,455	-				-0.8
3,703,485	+				+0.4
3,703,493	-				+0.1
3,703,532	+				+1.7
3,703,540	-				-1.3
3,703,595	+				-0.4
3,703,603	-				-0.5
3,703,613	+		MPMX20_03518	0.11	-0.0
3,703,682	-		MPMX20_03518	0.23	-0.3
3,703,759	+		MPMX20_03518	0.37	-0.7
3,703,768	+		MPMX20_03518	0.39	-0.7
3,703,801	+		MPMX20_03518	0.45	+1.2
3,703,886	-		MPMX20_03518	0.60	-0.6
3,703,891	-		MPMX20_03518	0.61	+0.3
3,703,894	+		MPMX20_03518	0.61	+0.2
3,703,894	+		MPMX20_03518	0.61	+2.1
3,703,894	+		MPMX20_03518	0.61	+1.6
3,703,894	+		MPMX20_03518	0.61	+0.3
3,703,902	-		MPMX20_03518	0.63	+0.7
3,703,902	-		MPMX20_03518	0.63	+1.0
3,703,902	-		MPMX20_03518	0.63	+0.9
3,703,902	-		MPMX20_03518	0.63	-0.6
3,703,904	+		MPMX20_03518	0.63	+0.8
3,703,904	+		MPMX20_03518	0.63	-0.4
3,704,008	+		MPMX20_03518	0.82	+0.9
3,704,019	+		MPMX20_03518	0.84	+0.2
3,704,027	-		MPMX20_03518	0.85	-0.9
3,704,030	+		MPMX20_03518	0.86	+0.2
3,704,064	+				-0.7
3,704,084	+				+0.8
3,704,092	-				+1.0
3,704,105	-				+0.1
3,704,126	+				-2.7
3,704,126	+				-1.8
3,704,126	+				-3.7
3,704,134	-				-3.0
3,704,139	-				-0.1
3,704,155	-				+0.6
3,704,169	-				-0.3
3,704,202	+		MPMX20_03519	0.13	-2.9
3,704,207	+		MPMX20_03519	0.14	-2.8
3,704,215	-		MPMX20_03519	0.15	-2.0
3,704,245	-		MPMX20_03519	0.18	-2.7
3,704,265	-		MPMX20_03519	0.21	-2.2
3,704,290	-		MPMX20_03519	0.24	-2.8
3,704,372	+		MPMX20_03519	0.34	-4.3
3,704,406	+		MPMX20_03519	0.39	-4.3
3,704,441	-		MPMX20_03519	0.43	-2.3
3,704,493	+		MPMX20_03519	0.50	-2.8
3,704,493	+		MPMX20_03519	0.50	-2.4
3,704,501	-		MPMX20_03519	0.51	-0.8
3,704,523	+		MPMX20_03519	0.54	-2.3
3,704,556	+		MPMX20_03519	0.58	-3.3
3,704,564	-		MPMX20_03519	0.59	-2.6
3,704,564	-		MPMX20_03519	0.59	-3.5
3,704,567	+		MPMX20_03519	0.59	-2.1
3,704,627	-		MPMX20_03519	0.67	-3.8
3,704,641	-		MPMX20_03519	0.69	-4.2
3,704,697	+		MPMX20_03519	0.76	+0.7
3,704,700	-		MPMX20_03519	0.76	-1.7
3,704,700	-		MPMX20_03519	0.76	-3.9
3,704,721	+		MPMX20_03519	0.79	-2.2
3,704,725	-		MPMX20_03519	0.79	-4.3
3,704,747	+		MPMX20_03519	0.82	-2.9
3,704,869	+				-3.3
3,704,875	-				-2.9
3,704,875	-				-2.2
3,704,937	-				+0.6
3,704,965	+		MPMX20_03520	0.15	+0.9
3,704,975	+		MPMX20_03520	0.17	-0.4
3,704,985	+		MPMX20_03520	0.19	+1.0
3,704,993	-		MPMX20_03520	0.20	+0.0
3,705,011	+		MPMX20_03520	0.24	+0.1
3,705,090	+		MPMX20_03520	0.39	-0.1
3,705,105	+		MPMX20_03520	0.41	-0.8
3,705,105	+		MPMX20_03520	0.41	-0.3
3,705,115	+		MPMX20_03520	0.43	+0.3
3,705,115	+		MPMX20_03520	0.43	+0.7
3,705,123	-		MPMX20_03520	0.45	+0.1
3,705,123	-		MPMX20_03520	0.45	-0.4
3,705,166	-		MPMX20_03520	0.53	-1.2
3,705,166	-		MPMX20_03520	0.53	-0.0
3,705,173	+		MPMX20_03520	0.54	+2.7
3,705,249	+		MPMX20_03520	0.69	+0.1
3,705,257	-		MPMX20_03520	0.70	+1.0
3,705,257	-		MPMX20_03520	0.70	-0.8
3,705,259	-		MPMX20_03520	0.70	-0.1
3,705,293	-		MPMX20_03520	0.77	-0.7
3,705,332	+		MPMX20_03520	0.84	-0.3
3,705,353	-		MPMX20_03520	0.88	+0.6
3,705,354	+		MPMX20_03520	0.88	+1.1
3,705,354	+		MPMX20_03520	0.88	-0.5
3,705,354	+		MPMX20_03520	0.88	-0.3
3,705,354	+		MPMX20_03520	0.88	-0.8
3,705,354	+		MPMX20_03520	0.88	+0.0
3,705,362	-		MPMX20_03520	0.90	-0.8
3,705,362	-		MPMX20_03520	0.90	-1.1
3,705,362	-		MPMX20_03520	0.90	-0.3
3,705,362	-		MPMX20_03520	0.90	+2.1
3,705,368	+				-0.0
3,705,368	+				-0.3
3,705,460	-				-0.4
3,705,466	-				-1.3
3,705,467	+				+0.1
3,705,470	+				-0.3
3,705,472	+				-1.0
3,705,472	+				+0.3
3,705,478	-		MPMX20_03521	0.10	+0.3
3,705,480	-		MPMX20_03521	0.11	+5.1
3,705,480	-		MPMX20_03521	0.11	+0.1
3,705,532	-		MPMX20_03521	0.21	-0.1
3,705,532	-		MPMX20_03521	0.21	-1.8
3,705,534	+		MPMX20_03521	0.21	-2.6
3,705,535	+		MPMX20_03521	0.21	+0.7
3,705,542	-		MPMX20_03521	0.23	-0.4
3,705,542	-		MPMX20_03521	0.23	+0.0
3,705,542	-		MPMX20_03521	0.23	+0.1
3,705,542	-		MPMX20_03521	0.23	-0.9
3,705,542	-		MPMX20_03521	0.23	+1.2
3,705,552	-		MPMX20_03521	0.24	-1.1
3,705,572	+		MPMX20_03521	0.28	-0.3
3,705,576	+		MPMX20_03521	0.29	+0.0
3,705,589	+		MPMX20_03521	0.31	+0.5
3,705,597	-		MPMX20_03521	0.33	-0.2
3,705,604	+		MPMX20_03521	0.34	-2.1
3,705,608	+		MPMX20_03521	0.35	-0.1
3,705,608	+		MPMX20_03521	0.35	+1.5
3,705,608	+		MPMX20_03521	0.35	+1.1
3,705,608	+		MPMX20_03521	0.35	-0.8
3,705,616	-		MPMX20_03521	0.37	+1.4
3,705,621	+		MPMX20_03521	0.38	+1.2
3,705,623	-		MPMX20_03521	0.38	-0.3
3,705,666	+		MPMX20_03521	0.46	+0.5
3,705,666	+		MPMX20_03521	0.46	+0.3
3,705,682	-		MPMX20_03521	0.49	-1.6
3,705,709	-		MPMX20_03521	0.54	-0.5
3,705,710	+		MPMX20_03521	0.54	-0.1
3,705,711	+		MPMX20_03521	0.55	+0.2
3,705,711	+		MPMX20_03521	0.55	-0.7
3,705,719	-		MPMX20_03521	0.56	+1.2
3,705,719	-		MPMX20_03521	0.56	-0.0
3,705,719	-		MPMX20_03521	0.56	-0.8
3,705,719	-		MPMX20_03521	0.56	+0.0
3,705,719	-		MPMX20_03521	0.56	-1.4
3,705,719	-		MPMX20_03521	0.56	-1.1
3,705,726	+		MPMX20_03521	0.57	-1.3
3,705,746	+		MPMX20_03521	0.61	+0.4
3,705,747	+		MPMX20_03521	0.61	+0.4
3,705,747	+		MPMX20_03521	0.61	+0.1
3,705,755	-		MPMX20_03521	0.63	+0.7
3,705,763	+		MPMX20_03521	0.64	-0.8
3,705,763	+		MPMX20_03521	0.64	+0.6
3,705,771	-		MPMX20_03521	0.66	+0.4
3,705,771	-		MPMX20_03521	0.66	+0.6
3,705,771	-		MPMX20_03521	0.66	-0.4
3,705,771	-		MPMX20_03521	0.66	+0.2
3,705,771	-		MPMX20_03521	0.66	+0.1
3,705,784	+		MPMX20_03521	0.68	-0.5
3,705,784	-		MPMX20_03521	0.68	+0.2
3,705,789	+		MPMX20_03521	0.69	+0.3
3,705,797	-		MPMX20_03521	0.71	-1.0
3,705,797	-		MPMX20_03521	0.71	+0.1
3,705,797	-		MPMX20_03521	0.71	+1.6
3,705,797	-		MPMX20_03521	0.71	+0.0
3,705,812	+		MPMX20_03521	0.74	-0.5
3,705,815	-		MPMX20_03521	0.74	+0.8
3,705,815	-		MPMX20_03521	0.74	+1.7
3,705,820	+		MPMX20_03521	0.75	-0.2
3,705,822	+		MPMX20_03521	0.76	-0.6
3,705,822	+		MPMX20_03521	0.76	+0.4
3,705,822	+		MPMX20_03521	0.76	-0.3
3,705,822	+		MPMX20_03521	0.76	+0.3
3,705,822	+		MPMX20_03521	0.76	-1.0
3,705,822	+		MPMX20_03521	0.76	+0.2
3,705,822	+		MPMX20_03521	0.76	-1.1
3,705,822	+		MPMX20_03521	0.76	+2.0
3,705,822	+		MPMX20_03521	0.76	+0.8
3,705,822	+		MPMX20_03521	0.76	-0.5
3,705,822	+		MPMX20_03521	0.76	+1.7
3,705,822	+		MPMX20_03521	0.76	-0.8
3,705,822	+		MPMX20_03521	0.76	+0.8
3,705,822	+		MPMX20_03521	0.76	+0.3
3,705,822	+		MPMX20_03521	0.76	-0.3
3,705,822	+		MPMX20_03521	0.76	-1.5
3,705,822	+		MPMX20_03521	0.76	+0.9
3,705,822	+		MPMX20_03521	0.76	-1.1
3,705,822	+		MPMX20_03521	0.76	+0.8
3,705,822	+		MPMX20_03521	0.76	-1.0
3,705,822	+		MPMX20_03521	0.76	+0.6
3,705,822	+		MPMX20_03521	0.76	+1.7
3,705,822	+		MPMX20_03521	0.76	+0.9
3,705,822	+		MPMX20_03521	0.76	+0.6
3,705,822	+		MPMX20_03521	0.76	+0.7
3,705,822	+		MPMX20_03521	0.76	-1.5
3,705,822	+		MPMX20_03521	0.76	-2.3
3,705,822	+		MPMX20_03521	0.76	-1.6
3,705,822	+		MPMX20_03521	0.76	+0.2
3,705,822	+		MPMX20_03521	0.76	-1.3
3,705,822	+		MPMX20_03521	0.76	-0.5
3,705,822	+		MPMX20_03521	0.76	-0.3
3,705,822	+		MPMX20_03521	0.76	-0.6
3,705,822	+		MPMX20_03521	0.76	+0.6
3,705,822	+		MPMX20_03521	0.76	+0.9
3,705,822	+		MPMX20_03521	0.76	-0.2
3,705,822	+		MPMX20_03521	0.76	+0.3
3,705,822	+		MPMX20_03521	0.76	+1.5
3,705,822	+		MPMX20_03521	0.76	-0.3
3,705,822	+		MPMX20_03521	0.76	+0.1
3,705,822	+		MPMX20_03521	0.76	-0.7
3,705,822	+		MPMX20_03521	0.76	-0.1
3,705,822	+		MPMX20_03521	0.76	-1.4
3,705,822	+		MPMX20_03521	0.76	+0.0
3,705,822	+		MPMX20_03521	0.76	-0.7
3,705,822	+		MPMX20_03521	0.76	+0.4
3,705,822	+		MPMX20_03521	0.76	+0.4
3,705,822	+		MPMX20_03521	0.76	+1.0
3,705,822	+		MPMX20_03521	0.76	-0.1
3,705,822	+		MPMX20_03521	0.76	+1.2
3,705,822	+		MPMX20_03521	0.76	-0.3
3,705,822	+		MPMX20_03521	0.76	+1.4
3,705,822	+		MPMX20_03521	0.76	+0.7
3,705,822	+		MPMX20_03521	0.76	-1.4
3,705,822	+		MPMX20_03521	0.76	-1.0
3,705,822	+		MPMX20_03521	0.76	+0.4
3,705,822	+		MPMX20_03521	0.76	+0.7
3,705,822	+		MPMX20_03521	0.76	+0.7
3,705,822	+		MPMX20_03521	0.76	+0.3
3,705,822	+		MPMX20_03521	0.76	-0.4
3,705,822	+		MPMX20_03521	0.76	-0.3
3,705,822	+		MPMX20_03521	0.76	-0.1
3,705,822	+		MPMX20_03521	0.76	+0.3
3,705,822	+		MPMX20_03521	0.76	+0.4
3,705,822	+		MPMX20_03521	0.76	+0.2
3,705,822	+		MPMX20_03521	0.76	-0.7
3,705,822	+		MPMX20_03521	0.76	+0.2
3,705,822	+		MPMX20_03521	0.76	+0.3
3,705,822	+		MPMX20_03521	0.76	+0.0
3,705,822	+		MPMX20_03521	0.76	+0.3
3,705,822	+		MPMX20_03521	0.76	-0.8
3,705,822	+		MPMX20_03521	0.76	-0.4
3,705,822	+		MPMX20_03521	0.76	+0.7
3,705,822	+		MPMX20_03521	0.76	+0.0
3,705,822	+		MPMX20_03521	0.76	+0.4
3,705,822	+		MPMX20_03521	0.76	+0.4
3,705,830	-		MPMX20_03521	0.77	+0.1
3,705,830	-		MPMX20_03521	0.77	-0.2
3,705,830	-		MPMX20_03521	0.77	+0.4
3,705,830	-		MPMX20_03521	0.77	+1.4
3,705,830	-		MPMX20_03521	0.77	-1.1
3,705,830	-		MPMX20_03521	0.77	+0.2
3,705,830	-		MPMX20_03521	0.77	-0.4
3,705,830	-		MPMX20_03521	0.77	-0.1
3,705,830	-		MPMX20_03521	0.77	+0.0
3,705,830	-		MPMX20_03521	0.77	-0.6
3,705,830	-		MPMX20_03521	0.77	-0.1
3,705,830	-		MPMX20_03521	0.77	-1.6
3,705,830	-		MPMX20_03521	0.77	+0.4
3,705,830	-		MPMX20_03521	0.77	-0.5
3,705,830	-		MPMX20_03521	0.77	-1.4
3,705,830	-		MPMX20_03521	0.77	+0.0
3,705,830	-		MPMX20_03521	0.77	-1.6
3,705,830	-		MPMX20_03521	0.77	-0.8
3,705,830	-		MPMX20_03521	0.77	-0.1
3,705,830	-		MPMX20_03521	0.77	-0.3
3,705,830	-		MPMX20_03521	0.77	+0.3
3,705,830	-		MPMX20_03521	0.77	-1.1
3,705,830	-		MPMX20_03521	0.77	+0.0
3,705,830	-		MPMX20_03521	0.77	+0.1
3,705,830	-		MPMX20_03521	0.77	-1.1
3,705,830	-		MPMX20_03521	0.77	-0.9
3,705,830	-		MPMX20_03521	0.77	-0.7
3,705,830	-		MPMX20_03521	0.77	+0.3
3,705,830	-		MPMX20_03521	0.77	+0.3
3,705,830	-		MPMX20_03521	0.77	-1.7
3,705,830	-		MPMX20_03521	0.77	+1.2
3,705,830	-		MPMX20_03521	0.77	+1.2
3,705,830	-		MPMX20_03521	0.77	-0.4
3,705,830	-		MPMX20_03521	0.77	+1.0
3,705,830	-		MPMX20_03521	0.77	-0.8
3,705,830	-		MPMX20_03521	0.77	+0.6
3,705,830	-		MPMX20_03521	0.77	-1.6
3,705,830	-		MPMX20_03521	0.77	+0.4
3,705,830	-		MPMX20_03521	0.77	-0.6
3,705,830	-		MPMX20_03521	0.77	-0.9
3,705,830	-		MPMX20_03521	0.77	-0.5
3,705,830	-		MPMX20_03521	0.77	+0.2
3,705,830	-		MPMX20_03521	0.77	+1.1
3,705,830	-		MPMX20_03521	0.77	+0.4
3,705,830	-		MPMX20_03521	0.77	+0.9
3,705,830	-		MPMX20_03521	0.77	-1.0
3,705,830	-		MPMX20_03521	0.77	-0.2
3,705,830	-		MPMX20_03521	0.77	-0.6
3,705,830	-		MPMX20_03521	0.77	+0.7
3,705,830	-		MPMX20_03521	0.77	+0.1
3,705,830	-		MPMX20_03521	0.77	-1.0
3,705,831	-		MPMX20_03521	0.77	+1.1
3,705,831	-		MPMX20_03521	0.77	+0.7
3,705,831	-		MPMX20_03521	0.77	-0.1
3,705,831	-		MPMX20_03521	0.77	+1.1
3,705,831	-		MPMX20_03521	0.77	-0.5
3,705,831	-		MPMX20_03521	0.77	+2.5
3,705,831	-		MPMX20_03521	0.77	+1.7
3,705,831	-		MPMX20_03521	0.77	+1.3
3,705,846	+		MPMX20_03521	0.80	-0.3
3,705,846	+		MPMX20_03521	0.80	-0.3
3,705,846	+		MPMX20_03521	0.80	-0.0
3,705,846	+		MPMX20_03521	0.80	-1.2
3,705,853	+		MPMX20_03521	0.81	-0.6
3,705,854	-		MPMX20_03521	0.82	+1.2
3,705,861	-		MPMX20_03521	0.83	-0.3
3,705,870	+		MPMX20_03521	0.85	-0.6
3,705,870	+		MPMX20_03521	0.85	+0.7
3,705,877	+		MPMX20_03521	0.86	-1.1
3,705,877	+		MPMX20_03521	0.86	+0.0
3,705,885	-		MPMX20_03521	0.88	-1.1
3,705,885	-		MPMX20_03521	0.88	+0.8
3,705,887	+		MPMX20_03521	0.88	-0.2