Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03376

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4
3,554,500	+		MPMX20_03375	0.52	+0.7
3,554,536	+		MPMX20_03375	0.55	-0.7
3,554,544	-		MPMX20_03375	0.55	-0.7
3,554,544	-		MPMX20_03375	0.55	+0.1
3,554,572	+		MPMX20_03375	0.57	+0.8
3,554,611	+		MPMX20_03375	0.60	+1.1
3,554,646	-		MPMX20_03375	0.62	+0.8
3,554,832	+		MPMX20_03375	0.74	+0.1
3,554,849	+		MPMX20_03375	0.75	+0.3
3,554,904	-		MPMX20_03375	0.79	+2.1
3,554,969	-		MPMX20_03375	0.83	-0.3
3,554,974	-		MPMX20_03375	0.84	+0.7
3,555,011	+		MPMX20_03375	0.86	+0.3
3,555,019	-		MPMX20_03375	0.87	+0.5
3,555,024	+		MPMX20_03375	0.87	-0.1
3,555,097	+				+0.6
3,555,135	-				+0.5
3,555,151	-				-0.0
3,555,166	+				+0.6
3,555,166	+				+1.1
3,555,166	+				-1.2
3,555,166	+				+1.1
3,555,174	-				-1.4
3,555,174	-				-0.6
3,555,174	-				+0.8
3,555,174	-				-1.3
3,555,211	+				+0.4
3,555,218	-				+0.5
3,555,233	+				-0.6
3,555,233	+				+1.1
3,555,520	-				-1.7
3,555,520	-				-2.7
3,555,556	-				-1.0
3,555,589	+		MPMX20_03376	0.11	-2.7
3,555,589	+		MPMX20_03376	0.11	-2.6
3,555,858	-		MPMX20_03376	0.44	-0.3
3,555,898	-		MPMX20_03376	0.48	-2.4
3,555,946	+		MPMX20_03376	0.54	-1.2
3,555,967	-		MPMX20_03376	0.57	-2.1
3,555,990	-		MPMX20_03376	0.59	-1.6
3,556,010	+		MPMX20_03376	0.62	-1.3
3,556,010	+		MPMX20_03376	0.62	-1.6
3,556,018	-		MPMX20_03376	0.63	-3.8
3,556,069	+		MPMX20_03376	0.69	-2.4
3,556,106	+		MPMX20_03376	0.73	-3.4
3,556,168	-		MPMX20_03376	0.81	-1.1
3,556,272	-				-3.1
3,556,359	+				+0.4
3,556,503	+		MPMX20_03377	0.10	-1.3
3,556,619	+		MPMX20_03377	0.69	-0.7
3,556,634	+		MPMX20_03377	0.76	-0.8
3,556,634	+		MPMX20_03377	0.76	+0.9
3,556,634	+		MPMX20_03377	0.76	+1.1
3,556,653	+		MPMX20_03377	0.86	+0.6
3,556,691	+				+0.3
3,556,710	+				+0.4
3,556,778	+				-0.9
3,556,823	-		MPMX20_03378	0.11	-0.5
3,556,868	+		MPMX20_03378	0.17	-1.0
3,556,910	-		MPMX20_03378	0.22	+0.4
3,556,924	-		MPMX20_03378	0.24	+2.0
3,556,932	-		MPMX20_03378	0.25	+0.6
3,556,941	+		MPMX20_03378	0.26	+0.9
3,556,949	-		MPMX20_03378	0.27	-1.6
3,556,985	-		MPMX20_03378	0.32	+0.9
3,557,071	+		MPMX20_03378	0.43	+0.1
3,557,127	+		MPMX20_03378	0.50	-0.8
3,557,154	+		MPMX20_03378	0.53	-0.6
3,557,277	+		MPMX20_03378	0.69	-0.2
3,557,285	-		MPMX20_03378	0.70	+2.3