Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03009

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4
3,140,599	-		MPMX20_03007	0.59	-2.5
3,140,618	+		MPMX20_03007	0.61	-2.5
3,140,703	-		MPMX20_03007	0.72	+0.5
3,140,709	+		MPMX20_03007	0.73	-1.5
3,140,717	-		MPMX20_03007	0.74	-2.9
3,140,754	-		MPMX20_03007	0.79	-1.1
3,140,880	-				-0.3
3,140,913	-				-0.7
3,140,946	-				-1.4
3,140,977	+		MPMX20_03008	0.10	-0.4
3,141,039	+		MPMX20_03008	0.20	+0.2
3,141,106	+		MPMX20_03008	0.31	+0.4
3,141,140	+		MPMX20_03008	0.37	+1.4
3,141,140	+		MPMX20_03008	0.37	-0.3
3,141,140	+		MPMX20_03008	0.37	-0.1
3,141,140	+		MPMX20_03008	0.37	-1.5
3,141,167	+		MPMX20_03008	0.41	-0.9
3,141,240	-		MPMX20_03008	0.53	-0.2
3,141,271	-		MPMX20_03008	0.58	+0.5
3,141,273	+		MPMX20_03008	0.59	-0.8
3,141,281	-		MPMX20_03008	0.60	+0.4
3,141,283	-		MPMX20_03008	0.60	-0.9
3,141,285	+		MPMX20_03008	0.61	-0.6
3,141,285	+		MPMX20_03008	0.61	-0.9
3,141,408	-		MPMX20_03008	0.81	+0.2
3,141,453	+		MPMX20_03008	0.88	-1.5
3,141,480	+				-1.0
3,141,602	+				+0.7
3,141,610	-				+0.7
3,141,613	+				+1.1
3,141,649	+				+1.7
3,141,649	+				+0.2
3,141,649	+				-0.7
3,141,649	+				+1.8
3,141,649	+				+1.5
3,141,657	-				+2.0
3,141,657	-				+1.5
3,141,657	-				-0.1
3,141,657	-				+0.7
3,141,657	-				+1.2
3,141,729	+		MPMX20_03009	0.17	+1.7
3,141,729	-		MPMX20_03009	0.17	+2.1
3,141,736	+		MPMX20_03009	0.17	+0.9
3,141,737	-		MPMX20_03009	0.17	+1.5
3,141,738	-		MPMX20_03009	0.18	-1.9
3,141,743	-		MPMX20_03009	0.18	+1.6
3,141,743	-		MPMX20_03009	0.18	+0.9
3,141,785	-		MPMX20_03009	0.22	+1.5
3,141,790	-		MPMX20_03009	0.23	+1.7
3,141,792	+		MPMX20_03009	0.23	+1.3
3,141,800	-		MPMX20_03009	0.24	+1.5
3,141,854	-		MPMX20_03009	0.29	+1.1
3,141,881	+		MPMX20_03009	0.32	+0.7
3,142,017	+		MPMX20_03009	0.46	+1.2
3,142,025	-		MPMX20_03009	0.47	+1.2
3,142,075	+		MPMX20_03009	0.52	+2.7
3,142,087	+		MPMX20_03009	0.53	-2.8
3,142,117	-		MPMX20_03009	0.56	+2.1
3,142,268	+		MPMX20_03009	0.72	+2.0
3,142,268	+		MPMX20_03009	0.72	+2.3
3,142,276	-		MPMX20_03009	0.72	+1.6
3,142,276	-		MPMX20_03009	0.72	-0.4
3,142,276	-		MPMX20_03009	0.72	+0.4
3,142,299	+		MPMX20_03009	0.75	+1.3
3,142,332	+		MPMX20_03009	0.78	-0.7
3,142,340	-		MPMX20_03009	0.79	+1.4
3,142,355	-		MPMX20_03009	0.80	+1.9
3,142,355	-		MPMX20_03009	0.80	+1.2
3,142,358	+		MPMX20_03009	0.81	+1.5
3,142,358	+		MPMX20_03009	0.81	+0.9
3,142,366	-		MPMX20_03009	0.82	+0.4
3,142,366	-		MPMX20_03009	0.82	+2.5
3,142,429	-		MPMX20_03009	0.88	+2.3
3,142,469	-				+0.3
3,142,520	-				+1.5
3,142,523	-				-0.6
3,142,525	+				+0.8
3,142,525	+				+1.7
3,142,525	+				+2.1
3,142,525	+				+1.4
3,142,533	-				+0.1
3,142,533	-				+0.6
3,142,545	+				+1.3
3,142,558	-				-1.4
3,142,594	+				+1.0
3,142,594	+				+1.4
3,142,594	+				+0.7
3,142,602	-				+0.7
3,142,602	-				-0.1
3,142,694	-				+0.2
3,142,777	+				-3.0
3,142,827	+				+0.1
3,142,912	+		MPMX20_03010	0.17	-2.8
3,142,912	+		MPMX20_03010	0.17	+0.1
3,142,920	-		MPMX20_03010	0.18	-0.9
3,142,935	+		MPMX20_03010	0.19	+0.1
3,142,947	+		MPMX20_03010	0.21	-0.3
3,142,998	+		MPMX20_03010	0.26	-1.3
3,142,998	+		MPMX20_03010	0.26	-1.5
3,142,998	+		MPMX20_03010	0.26	-1.7
3,142,998	+		MPMX20_03010	0.26	-1.3
3,142,998	+		MPMX20_03010	0.26	-0.9
3,142,998	+		MPMX20_03010	0.26	-1.5
3,142,998	+		MPMX20_03010	0.26	-1.5
3,142,998	+		MPMX20_03010	0.26	-1.3
3,142,998	+		MPMX20_03010	0.26	-1.1
3,142,998	+		MPMX20_03010	0.26	-0.9
3,142,998	+		MPMX20_03010	0.26	-1.1
3,143,006	-		MPMX20_03010	0.26	-0.6
3,143,006	-		MPMX20_03010	0.26	-1.1
3,143,006	-		MPMX20_03010	0.26	-1.5
3,143,006	-		MPMX20_03010	0.26	+0.7
3,143,006	-		MPMX20_03010	0.26	-0.3
3,143,006	-		MPMX20_03010	0.26	-2.5
3,143,045	+		MPMX20_03010	0.30	-0.6
3,143,099	-		MPMX20_03010	0.36	-0.3
3,143,252	+		MPMX20_03010	0.51	-0.3
3,143,287	+		MPMX20_03010	0.54	-2.2
3,143,295	-		MPMX20_03010	0.55	-0.3
3,143,297	-		MPMX20_03010	0.55	-1.3
3,143,297	-		MPMX20_03010	0.55	-1.5
3,143,297	-		MPMX20_03010	0.55	-1.7
3,143,315	+		MPMX20_03010	0.57	-1.9
3,143,315	+		MPMX20_03010	0.57	-2.1
3,143,315	+		MPMX20_03010	0.57	-2.5
3,143,423	-		MPMX20_03010	0.68	-0.3
3,143,491	+		MPMX20_03010	0.75	+0.7
3,143,491	+		MPMX20_03010	0.75	+0.7