Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02574

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4
2,710,390	-		MPMX20_02572	0.59	-0.2
2,710,427	-		MPMX20_02572	0.68	+0.0
2,710,428	+		MPMX20_02572	0.68	+1.3
2,710,428	+		MPMX20_02572	0.68	+1.1
2,710,432	+		MPMX20_02572	0.69	-0.8
2,710,440	+		MPMX20_02572	0.71	+0.8
2,710,520	+				-0.3
2,710,525	+				+0.7
2,710,525	+				-0.1
2,710,525	+				-0.7
2,710,525	+				+0.7
2,710,525	+				-1.8
2,710,525	+				+0.7
2,710,533	-				-0.7
2,710,533	-				-0.7
2,710,535	+				+1.7
2,710,535	-				-0.1
2,710,543	-				-1.1
2,710,577	-				-2.1
2,710,579	+				+0.5
2,710,579	+				-1.3
2,710,599	+				-0.0
2,710,639	+				-0.4
2,710,639	+				-1.2
2,710,666	+		MPMX20_02573	0.11	+0.7
2,710,678	+		MPMX20_02573	0.13	-0.5
2,710,678	+		MPMX20_02573	0.13	-0.8
2,710,686	-		MPMX20_02573	0.14	-1.9
2,710,688	+		MPMX20_02573	0.14	+0.4
2,710,739	-		MPMX20_02573	0.21	-0.0
2,710,769	-		MPMX20_02573	0.25	-2.6
2,710,769	-		MPMX20_02573	0.25	-1.8
2,710,804	+		MPMX20_02573	0.30	-0.7
2,710,832	+		MPMX20_02573	0.33	-0.6
2,710,977	-		MPMX20_02573	0.53	+0.7
2,711,013	-		MPMX20_02573	0.58	-1.0
2,711,018	-		MPMX20_02573	0.58	-1.5
2,711,018	-		MPMX20_02573	0.58	-1.5
2,711,058	+		MPMX20_02573	0.64	+2.0
2,711,068	+		MPMX20_02573	0.65	-0.1
2,711,068	+		MPMX20_02573	0.65	-0.1
2,711,076	-		MPMX20_02573	0.66	-0.9
2,711,091	-		MPMX20_02573	0.68	-1.3
2,711,118	-		MPMX20_02573	0.72	-0.9
2,711,139	+		MPMX20_02573	0.75	+1.1
2,711,159	+		MPMX20_02573	0.77	+2.3
2,711,226	+		MPMX20_02573	0.86	-0.4
2,711,282	+				-0.0
2,711,287	+				+1.2
2,711,342	+				-0.3
2,711,342	+				+0.6
2,711,352	+				+0.4
2,711,352	+				-0.7
2,711,352	+				-0.2
2,711,355	-				-1.3
2,711,360	-				-0.3
2,711,360	-				-1.1
2,711,360	-				-0.5
2,711,360	-				-1.0
2,711,360	-				+0.1
2,711,360	-				+1.7
2,711,360	-				-2.1
2,711,360	-				-2.5
2,711,360	-				-0.8
2,711,539	+		MPMX20_02574	0.30	+0.1
2,711,539	+		MPMX20_02574	0.30	-0.3
2,711,539	+		MPMX20_02574	0.30	-0.3
2,711,571	+		MPMX20_02574	0.36	+0.1
2,711,630	+		MPMX20_02574	0.46	-0.9
2,711,630	+		MPMX20_02574	0.46	-0.9
2,711,630	+		MPMX20_02574	0.46	-0.6
2,711,711	+		MPMX20_02574	0.61	-2.1
2,711,721	+		MPMX20_02574	0.63	+1.3
2,711,821	+		MPMX20_02574	0.82	-0.9
2,711,829	-		MPMX20_02574	0.83	+0.1
2,711,844	+		MPMX20_02574	0.86	-0.8
2,711,867	+				-0.6
2,711,875	-				-0.6
2,711,875	-				-1.5
2,711,907	+				-1.6
2,711,912	+				+0.1
2,711,920	-				-1.2
2,711,937	+				+0.8
2,711,937	+				+0.2
2,711,937	-				-1.8
2,711,955	+				+0.9
2,711,955	+				+0.7
2,711,955	+				+0.1
2,711,960	+				+0.1
2,711,960	+				+0.1
2,711,963	-				+0.2
2,711,963	-				+0.5
2,711,992	+				+1.2
2,711,992	+				-0.9
2,711,992	+				+0.1
2,712,000	-				-0.7
2,712,000	-				-2.2
2,712,008	-				+3.3
2,712,021	-				+0.7
2,712,021	-				+0.1
2,712,049	-				+0.1
2,712,049	-				-0.2
2,712,049	-				+0.3
2,712,054	-				-1.3
2,712,064	-		MPMX20_02575	0.10	-0.1
2,712,142	-		MPMX20_02575	0.30	-1.3
2,712,192	+		MPMX20_02575	0.43	-1.9
2,712,208	-		MPMX20_02575	0.47	+0.5
2,712,219	+		MPMX20_02575	0.49	+0.4
2,712,227	-		MPMX20_02575	0.52	+0.7
2,712,258	+		MPMX20_02575	0.59	-2.0
2,712,258	+		MPMX20_02575	0.59	-0.4
2,712,285	+		MPMX20_02575	0.66	-1.9
2,712,292	+		MPMX20_02575	0.68	+0.7
2,712,327	+		MPMX20_02575	0.77	-0.3
2,712,337	+		MPMX20_02575	0.79	+0.9
2,712,337	+		MPMX20_02575	0.79	+0.8
2,712,345	-		MPMX20_02575	0.81	-1.0
2,712,374	+		MPMX20_02575	0.89	-0.0
2,712,389	+				+0.8
2,712,389	+				+0.3
2,712,397	-				+2.5
2,712,397	-				+0.1
2,712,407	+				+0.3
2,712,415	-				-0.7
2,712,415	-				+0.2
2,712,415	-				-0.3
2,712,476	-				+0.2
2,712,481	-				+0.8
2,712,629	-		MPMX20_02576	0.23	-0.6
2,712,655	+		MPMX20_02576	0.27	-0.6
2,712,663	-		MPMX20_02576	0.28	-0.9
2,712,699	+		MPMX20_02576	0.33	+0.1
2,712,707	-		MPMX20_02576	0.34	-1.3
2,712,817	+		MPMX20_02576	0.48	-1.0
2,712,819	+		MPMX20_02576	0.49	-0.3
2,712,880	+		MPMX20_02576	0.57	-0.6