Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02544

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4
2,681,811	-		MPMX20_02543	0.29	-2.3
2,681,817	-		MPMX20_02543	0.30	+0.1
2,681,861	-		MPMX20_02543	0.33	-1.4
2,681,872	+		MPMX20_02543	0.34	+0.1
2,681,880	-		MPMX20_02543	0.35	+0.8
2,681,880	-		MPMX20_02543	0.35	+0.3
2,681,880	-		MPMX20_02543	0.35	-0.6
2,681,880	-		MPMX20_02543	0.35	+0.1
2,681,906	-		MPMX20_02543	0.37	+0.5
2,681,912	-		MPMX20_02543	0.38	-2.3
2,681,965	-		MPMX20_02543	0.42	+1.0
2,681,974	-		MPMX20_02543	0.43	-2.9
2,681,987	+		MPMX20_02543	0.44	-1.8
2,681,995	-		MPMX20_02543	0.45	-0.9
2,682,005	+		MPMX20_02543	0.45	-1.9
2,682,007	+		MPMX20_02543	0.46	+2.1
2,682,007	-		MPMX20_02543	0.46	-0.4
2,682,019	-		MPMX20_02543	0.47	-1.8
2,682,019	-		MPMX20_02543	0.47	-0.2
2,682,029	-		MPMX20_02543	0.47	-0.9
2,682,041	+		MPMX20_02543	0.48	-0.3
2,682,056	-		MPMX20_02543	0.50	-1.2
2,682,066	-		MPMX20_02543	0.50	-2.4
2,682,087	+		MPMX20_02543	0.52	-0.8
2,682,087	+		MPMX20_02543	0.52	+0.7
2,682,095	-		MPMX20_02543	0.53	+1.0
2,682,121	+		MPMX20_02543	0.55	-0.9
2,682,121	+		MPMX20_02543	0.55	-1.9
2,682,129	-		MPMX20_02543	0.56	+0.3
2,682,129	-		MPMX20_02543	0.56	-0.1
2,682,129	-		MPMX20_02543	0.56	+0.7
2,682,130	+		MPMX20_02543	0.56	-1.3
2,682,138	-		MPMX20_02543	0.56	-1.5
2,682,160	+		MPMX20_02543	0.58	-0.3
2,682,166	+		MPMX20_02543	0.59	-0.1
2,682,166	+		MPMX20_02543	0.59	-0.8
2,682,171	+		MPMX20_02543	0.59	-1.0
2,682,174	-		MPMX20_02543	0.59	-0.9
2,682,178	+		MPMX20_02543	0.60	+0.1
2,682,179	-		MPMX20_02543	0.60	-1.9
2,682,184	-		MPMX20_02543	0.60	-0.1
2,682,184	-		MPMX20_02543	0.60	-3.2
2,682,186	+		MPMX20_02543	0.60	-0.3
2,682,221	+		MPMX20_02543	0.63	-2.8
2,682,229	+		MPMX20_02543	0.64	-1.6
2,682,238	+		MPMX20_02543	0.65	-0.3
2,682,243	+		MPMX20_02543	0.65	-1.7
2,682,243	+		MPMX20_02543	0.65	+0.9
2,682,243	+		MPMX20_02543	0.65	-0.7
2,682,266	+		MPMX20_02543	0.67	-0.3
2,682,281	+		MPMX20_02543	0.68	-0.8
2,682,306	+		MPMX20_02543	0.70	-1.8
2,682,311	+		MPMX20_02543	0.71	-0.0
2,682,311	+		MPMX20_02543	0.71	+0.7
2,682,311	+		MPMX20_02543	0.71	-1.6
2,682,329	+		MPMX20_02543	0.72	-1.5
2,682,344	+		MPMX20_02543	0.74	-0.9
2,682,344	+		MPMX20_02543	0.74	-0.8
2,682,344	+		MPMX20_02543	0.74	-1.6
2,682,344	+		MPMX20_02543	0.74	-0.8
2,682,344	+		MPMX20_02543	0.74	-1.4
2,682,369	+		MPMX20_02543	0.76	-1.1
2,682,459	-		MPMX20_02543	0.83	+0.1
2,682,595	-				+0.4
2,682,595	-				-0.9
2,682,595	-				-0.6
2,682,595	-				+0.5
2,682,595	-				-1.1
2,682,622	-				-0.8
2,682,623	-				+1.7
2,682,678	-				-2.1
2,682,678	-				-3.1
2,682,678	-				-1.1
2,682,678	-				-0.6
2,682,678	-				-0.9
2,682,678	-				-0.6
2,682,713	-				-2.1
2,682,714	-				-2.0
2,682,729	-				-0.3
2,682,792	-				-1.0
2,682,804	-				-0.9
2,682,806	-				-2.7
2,682,839	-				+2.3
2,682,839	-				-2.6
2,682,851	-				-0.6
2,682,851	-				-0.9
2,682,851	-				-1.9
2,682,851	-				-1.6
2,682,861	-				+1.5
2,682,861	-				-0.8
2,682,879	-		MPMX20_02544	0.11	+0.5
2,682,879	-		MPMX20_02544	0.11	-1.1
2,682,879	-		MPMX20_02544	0.11	-1.1
2,682,879	-		MPMX20_02544	0.11	-1.3
2,682,889	-		MPMX20_02544	0.12	-0.4
2,682,891	-		MPMX20_02544	0.12	-1.2
2,682,894	+		MPMX20_02544	0.13	-2.6
2,682,902	-		MPMX20_02544	0.14	-2.2
2,682,902	-		MPMX20_02544	0.14	-1.7
2,682,902	-		MPMX20_02544	0.14	-2.0
2,682,907	-		MPMX20_02544	0.14	-0.3
2,682,913	+		MPMX20_02544	0.15	+0.1
2,682,921	-		MPMX20_02544	0.16	-1.5
2,682,926	-		MPMX20_02544	0.17	-0.3
2,682,929	-		MPMX20_02544	0.17	-1.1
2,683,004	+		MPMX20_02544	0.27	+0.4
2,683,005	+		MPMX20_02544	0.27	-0.3
2,683,005	+		MPMX20_02544	0.27	-0.5
2,683,005	+		MPMX20_02544	0.27	-2.6
2,683,005	+		MPMX20_02544	0.27	-0.5
2,683,005	+		MPMX20_02544	0.27	-1.6
2,683,005	+		MPMX20_02544	0.27	-1.0
2,683,005	+		MPMX20_02544	0.27	-2.1
2,683,005	+		MPMX20_02544	0.27	+0.8
2,683,005	+		MPMX20_02544	0.27	+0.5
2,683,005	+		MPMX20_02544	0.27	-1.2
2,683,005	+		MPMX20_02544	0.27	+0.1
2,683,005	+		MPMX20_02544	0.27	-1.3
2,683,005	+		MPMX20_02544	0.27	-1.3
2,683,005	+		MPMX20_02544	0.27	-1.1
2,683,005	+		MPMX20_02544	0.27	-1.3
2,683,005	+		MPMX20_02544	0.27	+0.4
2,683,005	+		MPMX20_02544	0.27	-0.8
2,683,005	+		MPMX20_02544	0.27	-1.9
2,683,005	+		MPMX20_02544	0.27	-0.9
2,683,005	+		MPMX20_02544	0.27	+0.1
2,683,005	+		MPMX20_02544	0.27	+0.6
2,683,011	+		MPMX20_02544	0.28	-1.1
2,683,030	+		MPMX20_02544	0.31	-0.3
2,683,040	+		MPMX20_02544	0.32	-2.0
2,683,041	+		MPMX20_02544	0.32	+0.1
2,683,041	+		MPMX20_02544	0.32	-1.4
2,683,041	+		MPMX20_02544	0.32	-1.0
2,683,041	+		MPMX20_02544	0.32	-1.2
2,683,041	+		MPMX20_02544	0.32	-2.0
2,683,041	+		MPMX20_02544	0.32	+0.7
2,683,041	+		MPMX20_02544	0.32	+2.3
2,683,041	+		MPMX20_02544	0.32	-0.9
2,683,041	+		MPMX20_02544	0.32	+0.3
2,683,041	+		MPMX20_02544	0.32	-0.7
2,683,053	+		MPMX20_02544	0.34	-0.3
2,683,055	+		MPMX20_02544	0.34	-0.4
2,683,063	+		MPMX20_02544	0.35	-2.1
2,683,065	+		MPMX20_02544	0.35	-1.6
2,683,085	+		MPMX20_02544	0.38	-1.4
2,683,085	+		MPMX20_02544	0.38	-0.5
2,683,085	+		MPMX20_02544	0.38	-0.6
2,683,097	+		MPMX20_02544	0.40	-2.5
2,683,097	+		MPMX20_02544	0.40	-0.5
2,683,097	+		MPMX20_02544	0.40	-1.3
2,683,131	+		MPMX20_02544	0.44	-3.1
2,683,131	+		MPMX20_02544	0.44	-0.9
2,683,485	-				-1.3
2,683,577	-				+1.2
2,683,593	-				-0.8
2,683,599	-				-0.2
2,683,599	-				-1.5
2,683,600	-				-0.6
2,683,601	-				-1.3
2,683,601	-				-1.1
2,683,653	-		MPMX20_02545	0.18	-1.7
2,683,653	-		MPMX20_02545	0.18	-2.2
2,683,658	-		MPMX20_02545	0.20	+1.9
2,683,658	-		MPMX20_02545	0.20	-1.2
2,683,658	-		MPMX20_02545	0.20	-1.0
2,683,658	-		MPMX20_02545	0.20	-1.3
2,683,677	-		MPMX20_02545	0.25	-1.5
2,683,677	-		MPMX20_02545	0.25	-1.8
2,683,682	-		MPMX20_02545	0.27	-1.2
2,683,687	-		MPMX20_02545	0.28	-2.8
2,683,687	-		MPMX20_02545	0.28	-2.6
2,683,687	-		MPMX20_02545	0.28	-0.4
2,683,687	-		MPMX20_02545	0.28	-1.6
2,683,687	-		MPMX20_02545	0.28	-0.3
2,683,692	-		MPMX20_02545	0.30	-1.0
2,683,692	-		MPMX20_02545	0.30	-1.0
2,683,692	-		MPMX20_02545	0.30	-0.4
2,683,692	-		MPMX20_02545	0.30	-1.8
2,683,692	-		MPMX20_02545	0.30	-2.3
2,683,699	-		MPMX20_02545	0.32	-2.8
2,683,699	-		MPMX20_02545	0.32	-0.6
2,683,699	-		MPMX20_02545	0.32	+0.7
2,683,704	-		MPMX20_02545	0.33	-2.2
2,683,719	-		MPMX20_02545	0.37	-1.2
2,683,727	-		MPMX20_02545	0.40	-1.2
2,683,745	-		MPMX20_02545	0.45	-1.3
2,683,756	+		MPMX20_02545	0.48	-0.6
2,683,764	-		MPMX20_02545	0.50	-1.6
2,683,764	-		MPMX20_02545	0.50	-0.3
2,683,764	-		MPMX20_02545	0.50	-0.4
2,683,764	-		MPMX20_02545	0.50	-1.3
2,683,764	-		MPMX20_02545	0.50	-0.3
2,683,764	-		MPMX20_02545	0.50	-0.6
2,683,764	-		MPMX20_02545	0.50	-2.0
2,683,764	-		MPMX20_02545	0.50	-0.2
2,683,764	-		MPMX20_02545	0.50	-0.7
2,683,794	-		MPMX20_02545	0.59	-1.3
2,683,829	-		MPMX20_02545	0.69	-2.1
2,683,844	-		MPMX20_02545	0.73	+1.4
2,683,847	-		MPMX20_02545	0.74	+0.4
2,683,873	-		MPMX20_02545	0.82	-1.5
2,683,873	-		MPMX20_02545	0.82	+0.1
2,683,884	-		MPMX20_02545	0.85	-0.1
2,683,896	-		MPMX20_02545	0.88	-0.3
2,683,896	-		MPMX20_02545	0.88	-1.9
2,683,896	-		MPMX20_02545	0.88	+0.1
2,683,899	-		MPMX20_02545	0.89	-0.5
2,683,913	-				-1.2
2,683,913	-				-1.6
2,683,921	+				-1.3
2,683,921	+				-0.9
2,683,921	+				-1.5
2,683,921	+				-0.1
2,683,929	-				-2.4
2,683,929	-				-0.6
2,683,929	-				-1.2
2,683,929	-				-1.6
2,683,929	-				-2.6
2,683,929	-				-1.4
2,683,929	-				-0.3
2,683,929	-				-1.0
2,683,929	-				-1.3
2,683,929	-				-0.4
2,683,929	-				-0.5
2,683,929	-				-2.0
2,683,938	+				-0.9
2,683,945	+				+0.5
2,683,946	-				-1.8
2,683,946	-				-2.4
2,683,946	-				-0.9
2,683,946	-				-1.5
2,683,955	+				+0.7
2,683,956	-				-2.2
2,683,961	+				-0.4
2,683,961	+				-1.4
2,683,961	-				-0.3
2,683,963	+				-0.1
2,683,963	+				-1.1
2,683,963	+				-1.5
2,683,968	+				-0.3
2,683,969	-				-2.0
2,683,969	-				-1.3
2,683,971	-				-1.5
2,683,971	-				-1.2
2,683,971	-				-0.6
2,683,971	-				-1.6
2,683,971	-				-0.5
2,683,971	-				-0.3
2,683,988	+				+0.1
2,683,993	+				+0.8
2,683,995	+				-1.1
2,684,000	+				-0.1
2,684,014	-				-0.6
2,684,123	+				-3.6
2,684,123	+				-0.9
2,684,123	+				-2.1
2,684,127	+				-2.9
2,684,132	+				-2.0
2,684,132	+				-1.3
2,684,132	+				-0.9
2,684,132	+				-1.3
2,684,132	+				-1.3
2,684,132	+				+1.7
2,684,132	+				-1.3
2,684,132	+				-0.8
2,684,132	+				-0.9
2,684,132	+				-0.6
2,684,135	-				-0.6
2,684,137	+				-1.6
2,684,137	+				+0.3
2,684,137	+				-2.8
2,684,137	+				-1.1
2,684,137	+				-2.2
2,684,137	+				-1.1
2,684,137	+				-1.5
2,684,137	+				+0.7
2,684,137	+				-2.2
2,684,137	+				-3.5
2,684,137	+				-0.9
2,684,147	+				-3.5
2,684,155	+				-2.2
2,684,155	+				-1.0
2,684,155	+				-0.9
2,684,155	+				-2.3
2,684,155	+				-0.6
2,684,155	+				+0.1
2,684,158	+				-2.8
2,684,180	+				-2.7
2,684,267	+				-1.1
2,684,350	+		MPMX20_02546	0.19	+1.7
2,684,355	+		MPMX20_02546	0.19	-0.6
2,684,498	+		MPMX20_02546	0.35	+0.7
2,684,506	-		MPMX20_02546	0.36	-1.9