Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02304

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4
2,424,284	-				-0.7
2,424,284	-				-2.0
2,424,284	-				-0.4
2,424,284	-				-0.4
2,424,284	-				-1.0
2,424,284	-				-1.9
2,424,413	-		MPMX20_02304	0.12	+0.1
2,424,413	-		MPMX20_02304	0.12	-1.2
2,424,423	-		MPMX20_02304	0.12	-1.0
2,424,423	-		MPMX20_02304	0.12	-3.2
2,424,429	-		MPMX20_02304	0.13	-0.4
2,424,434	-		MPMX20_02304	0.14	-0.0
2,424,434	-		MPMX20_02304	0.14	-0.2
2,424,440	-		MPMX20_02304	0.14	+0.0
2,424,440	-		MPMX20_02304	0.14	-0.2
2,424,440	-		MPMX20_02304	0.14	-1.8
2,424,440	-		MPMX20_02304	0.14	+1.0
2,424,440	-		MPMX20_02304	0.14	-0.7
2,424,440	-		MPMX20_02304	0.14	+0.6
2,424,440	-		MPMX20_02304	0.14	+0.4
2,424,440	-		MPMX20_02304	0.14	-1.4
2,424,440	-		MPMX20_02304	0.14	-0.7
2,424,443	-		MPMX20_02304	0.14	-1.4
2,424,443	-		MPMX20_02304	0.14	-0.3
2,424,443	-		MPMX20_02304	0.14	-1.7
2,424,443	-		MPMX20_02304	0.14	-1.7
2,424,443	-		MPMX20_02304	0.14	-1.1
2,424,443	-		MPMX20_02304	0.14	-2.8
2,424,443	-		MPMX20_02304	0.14	-2.6
2,424,443	-		MPMX20_02304	0.14	-2.2
2,424,448	-		MPMX20_02304	0.15	-1.1
2,424,453	-		MPMX20_02304	0.15	-1.4
2,424,453	-		MPMX20_02304	0.15	-0.5
2,424,453	-		MPMX20_02304	0.15	-1.8
2,424,453	-		MPMX20_02304	0.15	-0.8
2,424,453	-		MPMX20_02304	0.15	-2.4
2,424,458	-		MPMX20_02304	0.16	-0.4
2,424,458	-		MPMX20_02304	0.16	-0.4
2,424,463	-		MPMX20_02304	0.16	-0.4
2,424,463	-		MPMX20_02304	0.16	-1.0
2,424,463	-		MPMX20_02304	0.16	-1.0
2,424,497	-		MPMX20_02304	0.20	-1.4
2,424,504	-		MPMX20_02304	0.20	+0.0
2,424,509	-		MPMX20_02304	0.21	-1.4
2,424,509	-		MPMX20_02304	0.21	-1.0
2,424,521	-		MPMX20_02304	0.22	-2.0
2,424,521	-		MPMX20_02304	0.22	-0.5
2,424,521	-		MPMX20_02304	0.22	-1.8
2,424,521	-		MPMX20_02304	0.22	-1.0
2,424,521	-		MPMX20_02304	0.22	+0.4
2,424,521	-		MPMX20_02304	0.22	-1.1
2,424,521	-		MPMX20_02304	0.22	+0.0
2,424,521	-		MPMX20_02304	0.22	-0.4
2,424,521	-		MPMX20_02304	0.22	-0.7
2,424,521	-		MPMX20_02304	0.22	-2.2
2,424,521	-		MPMX20_02304	0.22	-1.4
2,424,521	-		MPMX20_02304	0.22	+0.2
2,424,521	-		MPMX20_02304	0.22	-0.4
2,424,521	-		MPMX20_02304	0.22	+1.0
2,424,521	-		MPMX20_02304	0.22	-1.2
2,424,521	-		MPMX20_02304	0.22	-1.1
2,424,521	-		MPMX20_02304	0.22	-2.3
2,424,521	-		MPMX20_02304	0.22	-2.3
2,424,521	-		MPMX20_02304	0.22	-0.5
2,424,521	-		MPMX20_02304	0.22	-0.6
2,424,521	-		MPMX20_02304	0.22	-3.9
2,424,521	-		MPMX20_02304	0.22	-0.9
2,424,521	-		MPMX20_02304	0.22	+0.0
2,424,521	-		MPMX20_02304	0.22	-1.5
2,424,521	-		MPMX20_02304	0.22	-1.8
2,424,521	-		MPMX20_02304	0.22	-1.1
2,424,521	-		MPMX20_02304	0.22	-1.4
2,424,521	-		MPMX20_02304	0.22	-1.7
2,424,521	-		MPMX20_02304	0.22	-0.7
2,424,521	-		MPMX20_02304	0.22	-0.7
2,424,521	-		MPMX20_02304	0.22	-0.2
2,424,521	-		MPMX20_02304	0.22	-1.8
2,424,521	-		MPMX20_02304	0.22	-1.1
2,424,521	-		MPMX20_02304	0.22	-1.5
2,424,521	-		MPMX20_02304	0.22	-0.2
2,424,521	-		MPMX20_02304	0.22	-2.6
2,424,521	-		MPMX20_02304	0.22	+0.0
2,424,521	-		MPMX20_02304	0.22	-0.8
2,424,521	-		MPMX20_02304	0.22	-1.8
2,424,521	-		MPMX20_02304	0.22	-0.4
2,424,521	-		MPMX20_02304	0.22	-0.7
2,424,521	-		MPMX20_02304	0.22	-0.4
2,424,521	-		MPMX20_02304	0.22	-0.4
2,424,521	-		MPMX20_02304	0.22	+0.3
2,424,521	-		MPMX20_02304	0.22	+1.6
2,424,521	-		MPMX20_02304	0.22	-1.2
2,424,521	-		MPMX20_02304	0.22	-0.7
2,424,529	-		MPMX20_02304	0.23	-1.7
2,424,529	-		MPMX20_02304	0.23	-2.1
2,424,529	-		MPMX20_02304	0.23	-0.7
2,424,529	-		MPMX20_02304	0.23	-1.2
2,424,529	-		MPMX20_02304	0.23	-2.4
2,424,529	-		MPMX20_02304	0.23	+0.9
2,424,529	-		MPMX20_02304	0.23	-1.0
2,424,529	-		MPMX20_02304	0.23	-1.4
2,424,529	-		MPMX20_02304	0.23	+1.6
2,424,529	-		MPMX20_02304	0.23	-1.0
2,424,529	-		MPMX20_02304	0.23	-3.4
2,424,529	-		MPMX20_02304	0.23	+1.6
2,424,529	-		MPMX20_02304	0.23	-1.8
2,424,529	-		MPMX20_02304	0.23	-0.5
2,424,529	-		MPMX20_02304	0.23	+0.6
2,424,529	-		MPMX20_02304	0.23	+0.0
2,424,529	-		MPMX20_02304	0.23	-0.7
2,424,529	-		MPMX20_02304	0.23	-2.4
2,424,529	-		MPMX20_02304	0.23	-1.5
2,424,529	-		MPMX20_02304	0.23	-2.0
2,424,529	-		MPMX20_02304	0.23	-1.4
2,424,529	-		MPMX20_02304	0.23	-1.1
2,424,529	-		MPMX20_02304	0.23	-0.4
2,424,529	-		MPMX20_02304	0.23	-1.4
2,424,529	-		MPMX20_02304	0.23	+0.0
2,424,529	-		MPMX20_02304	0.23	+0.3
2,424,529	-		MPMX20_02304	0.23	-3.2
2,424,529	-		MPMX20_02304	0.23	-2.4
2,424,529	-		MPMX20_02304	0.23	+1.0
2,424,529	-		MPMX20_02304	0.23	-1.1
2,424,529	-		MPMX20_02304	0.23	-1.2
2,424,548	-		MPMX20_02304	0.24	-1.7
2,424,553	-		MPMX20_02304	0.25	-1.6
2,424,553	-		MPMX20_02304	0.25	-2.3
2,424,563	-		MPMX20_02304	0.26	-1.2
2,424,563	-		MPMX20_02304	0.26	+0.0
2,424,563	-		MPMX20_02304	0.26	-0.0
2,424,563	-		MPMX20_02304	0.26	-0.8
2,424,563	-		MPMX20_02304	0.26	-0.9
2,424,589	-		MPMX20_02304	0.28	-2.0
2,424,589	-		MPMX20_02304	0.28	-1.7
2,424,589	-		MPMX20_02304	0.28	-1.1
2,424,589	-		MPMX20_02304	0.28	+0.7
2,424,589	-		MPMX20_02304	0.28	+0.8
2,424,599	-		MPMX20_02304	0.29	-1.7
2,424,686	-		MPMX20_02304	0.38	-2.3
2,424,715	-		MPMX20_02304	0.41	-0.7
2,424,743	-		MPMX20_02304	0.43	-0.7
2,424,794	-		MPMX20_02304	0.48	-0.4
2,424,809	-		MPMX20_02304	0.50	-2.0
2,424,809	-		MPMX20_02304	0.50	-1.6
2,424,815	-		MPMX20_02304	0.50	-0.3
2,424,815	-		MPMX20_02304	0.50	-1.3
2,424,831	-		MPMX20_02304	0.52	-2.0
2,424,831	-		MPMX20_02304	0.52	-0.4
2,424,831	-		MPMX20_02304	0.52	-0.5
2,424,831	-		MPMX20_02304	0.52	-0.4
2,424,850	-		MPMX20_02304	0.54	-2.0
2,424,850	-		MPMX20_02304	0.54	-1.4
2,424,850	-		MPMX20_02304	0.54	-1.2
2,424,879	-		MPMX20_02304	0.56	+1.1
2,424,893	-		MPMX20_02304	0.58	-1.0
2,425,064	+		MPMX20_02304	0.74	-1.0
2,425,117	-		MPMX20_02304	0.79	+1.0
2,425,166	-		MPMX20_02304	0.84	-0.2
2,425,191	-		MPMX20_02304	0.86	-0.8
2,425,191	-		MPMX20_02304	0.86	-0.7
2,425,196	-		MPMX20_02304	0.87	+0.6
2,425,198	-		MPMX20_02304	0.87	-1.5
2,425,208	+		MPMX20_02304	0.88	-2.8
2,425,254	+				+0.3
2,425,267	+				-0.4
2,425,267	+				+0.0
2,425,267	+				-1.0
2,425,267	+				+0.3
2,425,277	+				-2.4
2,425,277	+				-0.4
2,425,277	+				+0.4
2,425,277	+				+0.1
2,425,277	+				-0.5
2,425,277	+				-2.4
2,425,277	+				-1.4
2,425,277	+				+0.0
2,425,277	+				-2.3
2,425,277	+				+0.3
2,425,280	+				-2.6
2,425,287	+				-0.4
2,425,287	+				+0.0
2,425,287	+				-1.3
2,425,287	+				-0.4
2,425,287	+				-1.0
2,425,287	+				-1.8
2,425,287	+				-2.1
2,425,287	+				+1.4
2,425,287	+				+0.6
2,425,287	+				-2.5
2,425,287	+				+0.6
2,425,287	+				-0.7
2,425,287	+				+0.0
2,425,287	+				-0.2
2,425,287	+				-1.5
2,425,287	+				-2.8
2,425,287	+				-2.0
2,425,287	+				-1.8
2,425,287	+				+1.6
2,425,287	+				+0.0
2,425,292	+				-2.3
2,425,321	+				-0.4
2,425,321	+				-1.5
2,425,321	+				+0.0
2,425,321	+				-2.0
2,425,335	+				-1.2
2,425,335	+				-2.3
2,425,335	+				-0.2
2,425,339	+				-1.9
2,425,451	-				-2.1
2,425,603	-				-2.1
2,425,649	-		MPMX20_02305	0.16	-0.2
2,425,721	-		MPMX20_02305	0.44	-1.2
2,425,724	-		MPMX20_02305	0.45	+0.5
2,425,724	-		MPMX20_02305	0.45	-1.0
2,425,729	-		MPMX20_02305	0.47	-2.2
2,425,860	+				-1.5
2,425,906	+				+1.2
2,425,910	+				+0.6
2,425,927	+				-0.2