Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02302

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4
2,420,638	+		MPMX20_02301	0.83	+0.3
2,420,638	+		MPMX20_02301	0.83	-0.7
2,420,638	+		MPMX20_02301	0.83	-0.0
2,420,645	-		MPMX20_02301	0.83	-0.1
2,420,646	-		MPMX20_02301	0.83	+0.4
2,420,682	+		MPMX20_02301	0.84	+1.3
2,420,682	+		MPMX20_02301	0.84	-0.2
2,420,682	+		MPMX20_02301	0.84	+0.4
2,420,682	+		MPMX20_02301	0.84	-1.6
2,420,682	+		MPMX20_02301	0.84	+1.3
2,420,690	-		MPMX20_02301	0.84	+1.2
2,420,690	-		MPMX20_02301	0.84	+0.7
2,420,690	-		MPMX20_02301	0.84	-1.2
2,420,690	-		MPMX20_02301	0.84	+0.0
2,420,690	-		MPMX20_02301	0.84	-0.3
2,420,695	-		MPMX20_02301	0.84	-0.2
2,420,771	+		MPMX20_02301	0.86	-0.1
2,420,771	+		MPMX20_02301	0.86	+1.1
2,420,779	-		MPMX20_02301	0.86	-0.4
2,420,779	-		MPMX20_02301	0.86	-1.0
2,420,797	-		MPMX20_02301	0.86	-1.0
2,420,797	-		MPMX20_02301	0.86	-0.3
2,420,808	-		MPMX20_02301	0.86	+0.6
2,420,808	-		MPMX20_02301	0.86	-0.1
2,420,808	-		MPMX20_02301	0.86	+0.3
2,420,810	+		MPMX20_02301	0.86	-0.1
2,420,818	-		MPMX20_02301	0.86	+0.4
2,420,819	-		MPMX20_02301	0.86	+0.1
2,420,855	+		MPMX20_02301	0.87	+1.5
2,420,855	+		MPMX20_02301	0.87	+0.2
2,420,893	+		MPMX20_02301	0.88	+0.2
2,420,933	+		MPMX20_02301	0.88	+0.1
2,421,004	-		MPMX20_02301	0.90	+0.1
2,421,006	+		MPMX20_02301	0.90	+0.3
2,421,006	+		MPMX20_02301	0.90	-0.2
2,421,006	+		MPMX20_02301	0.90	-0.8
2,421,014	-		MPMX20_02301	0.90	+0.2
2,421,027	+				-0.8
2,421,086	-				+0.1
2,421,140	+				-1.4
2,421,140	-				+0.8
2,421,147	+				+0.0
2,421,155	-				+0.7
2,421,158	-				+0.3
2,421,160	+				-0.2
2,421,218	+				-1.1
2,421,268	+				+0.8
2,421,280	+				+0.3
2,421,327	+				-0.6
2,421,335	-				+1.9
2,421,337	+				-0.8
2,421,343	+				+0.2
2,421,367	-				+0.7
2,421,394	+				+1.6
2,421,399	+				-0.9
2,421,402	-				+0.2
2,421,413	+				-0.8
2,421,414	+				-1.2
2,421,482	+				+0.8
2,421,485	-				+0.0
2,421,487	+				-0.8
2,421,533	+				+0.4
2,421,563	-				+1.6
2,421,625	-				+1.4
2,421,629	-				-0.6
2,421,629	-				-0.4
2,421,638	+				-0.8
2,421,639	+				+1.0
2,421,680	+				-0.1
2,421,694	+				+0.8
2,421,702	-				-2.0
2,421,702	-				-2.2
2,421,707	+				-0.5
2,421,728	+		MPMX20_02302	0.12	-0.0
2,421,764	-		MPMX20_02302	0.15	+0.2
2,421,766	-		MPMX20_02302	0.15	+0.0
2,421,766	-		MPMX20_02302	0.15	+1.0
2,421,823	+		MPMX20_02302	0.20	-1.2
2,421,823	+		MPMX20_02302	0.20	-0.8
2,421,823	+		MPMX20_02302	0.20	-1.8
2,421,823	+		MPMX20_02302	0.20	-0.3
2,421,823	+		MPMX20_02302	0.20	+0.5
2,421,823	+		MPMX20_02302	0.20	-1.1
2,421,823	+		MPMX20_02302	0.20	+0.2
2,421,831	-		MPMX20_02302	0.20	-0.1
2,421,841	-		MPMX20_02302	0.21	-1.5
2,421,850	-		MPMX20_02302	0.22	-0.0
2,421,866	-		MPMX20_02302	0.23	-1.5
2,421,878	-		MPMX20_02302	0.24	+0.1
2,421,900	+		MPMX20_02302	0.26	-0.5
2,421,908	-		MPMX20_02302	0.27	+0.8
2,421,949	+		MPMX20_02302	0.30	+0.0
2,421,959	+		MPMX20_02302	0.31	-2.5
2,421,983	+		MPMX20_02302	0.33	-1.3
2,422,003	-		MPMX20_02302	0.35	-1.2
2,422,016	+		MPMX20_02302	0.36	-1.0
2,422,016	+		MPMX20_02302	0.36	-0.0
2,422,024	-		MPMX20_02302	0.37	+0.6
2,422,024	-		MPMX20_02302	0.37	-0.3
2,422,031	-		MPMX20_02302	0.37	-1.0
2,422,031	-		MPMX20_02302	0.37	+0.3
2,422,052	+		MPMX20_02302	0.39	-0.2
2,422,052	+		MPMX20_02302	0.39	-0.3
2,422,059	-		MPMX20_02302	0.39	-0.4
2,422,060	-		MPMX20_02302	0.40	-0.1
2,422,060	-		MPMX20_02302	0.40	-0.3
2,422,060	-		MPMX20_02302	0.40	-1.8
2,422,060	-		MPMX20_02302	0.40	+0.1
2,422,060	-		MPMX20_02302	0.40	-0.5
2,422,060	-		MPMX20_02302	0.40	+0.0
2,422,066	+		MPMX20_02302	0.40	-1.4
2,422,066	+		MPMX20_02302	0.40	+0.3
2,422,101	+		MPMX20_02302	0.43	+0.1
2,422,115	-		MPMX20_02302	0.44	-0.3
2,422,121	+		MPMX20_02302	0.45	-0.4
2,422,150	+		MPMX20_02302	0.47	+0.3
2,422,158	-		MPMX20_02302	0.48	-0.6
2,422,158	-		MPMX20_02302	0.48	+0.5
2,422,158	-		MPMX20_02302	0.48	-0.4
2,422,158	-		MPMX20_02302	0.48	-0.9
2,422,163	-		MPMX20_02302	0.48	-1.0
2,422,187	-		MPMX20_02302	0.50	-0.8
2,422,208	-		MPMX20_02302	0.52	+0.2
2,422,212	+		MPMX20_02302	0.52	-0.7
2,422,220	-		MPMX20_02302	0.53	-0.9
2,422,222	+		MPMX20_02302	0.53	+0.6
2,422,231	+		MPMX20_02302	0.54	+0.9
2,422,233	+		MPMX20_02302	0.54	+0.4
2,422,233	+		MPMX20_02302	0.54	-1.2
2,422,233	+		MPMX20_02302	0.54	+0.6
2,422,233	+		MPMX20_02302	0.54	-0.5
2,422,233	+		MPMX20_02302	0.54	-0.7
2,422,238	+		MPMX20_02302	0.55	+0.5
2,422,238	+		MPMX20_02302	0.55	-1.5
2,422,246	-		MPMX20_02302	0.55	+0.2
2,422,246	-		MPMX20_02302	0.55	+0.2
2,422,246	-		MPMX20_02302	0.55	+0.1
2,422,296	+		MPMX20_02302	0.59	-0.2
2,422,296	-		MPMX20_02302	0.59	-0.5
2,422,352	+		MPMX20_02302	0.64	+0.3
2,422,354	+		MPMX20_02302	0.64	+0.0
2,422,354	+		MPMX20_02302	0.64	+0.6
2,422,354	+		MPMX20_02302	0.64	+0.6
2,422,362	-		MPMX20_02302	0.65	-2.1
2,422,362	-		MPMX20_02302	0.65	+1.0
2,422,362	-		MPMX20_02302	0.65	-1.3
2,422,362	-		MPMX20_02302	0.65	-1.0
2,422,364	+		MPMX20_02302	0.65	-0.8
2,422,364	+		MPMX20_02302	0.65	+0.8
2,422,364	+		MPMX20_02302	0.65	-0.2
2,422,364	+		MPMX20_02302	0.65	+0.2
2,422,364	+		MPMX20_02302	0.65	+1.0
2,422,364	+		MPMX20_02302	0.65	+0.1
2,422,372	+		MPMX20_02302	0.66	+0.6
2,422,372	+		MPMX20_02302	0.66	+0.6
2,422,372	+		MPMX20_02302	0.66	-0.3
2,422,372	+		MPMX20_02302	0.66	+0.0
2,422,372	+		MPMX20_02302	0.66	-0.0
2,422,372	+		MPMX20_02302	0.66	+0.2
2,422,372	+		MPMX20_02302	0.66	+0.2
2,422,372	+		MPMX20_02302	0.66	+0.5
2,422,372	-		MPMX20_02302	0.66	-0.7
2,422,372	-		MPMX20_02302	0.66	-1.7
2,422,372	-		MPMX20_02302	0.66	+0.1
2,422,372	-		MPMX20_02302	0.66	+0.6
2,422,379	+		MPMX20_02302	0.66	+0.2
2,422,380	-		MPMX20_02302	0.67	-0.5
2,422,380	-		MPMX20_02302	0.67	-1.5
2,422,380	-		MPMX20_02302	0.67	+1.1
2,422,380	-		MPMX20_02302	0.67	+0.4
2,422,380	-		MPMX20_02302	0.67	-0.5
2,422,380	-		MPMX20_02302	0.67	-0.1
2,422,380	-		MPMX20_02302	0.67	+0.5
2,422,386	+		MPMX20_02302	0.67	-1.0
2,422,387	+		MPMX20_02302	0.67	+0.3
2,422,387	+		MPMX20_02302	0.67	+0.0
2,422,394	-		MPMX20_02302	0.68	+0.0
2,422,397	-		MPMX20_02302	0.68	-1.0
2,422,399	-		MPMX20_02302	0.68	+0.6
2,422,424	+		MPMX20_02302	0.70	+0.8
2,422,424	+		MPMX20_02302	0.70	-0.6
2,422,424	+		MPMX20_02302	0.70	-0.7
2,422,424	+		MPMX20_02302	0.70	-1.4
2,422,424	+		MPMX20_02302	0.70	+0.0
2,422,424	+		MPMX20_02302	0.70	-0.5
2,422,424	+		MPMX20_02302	0.70	-0.5
2,422,424	+		MPMX20_02302	0.70	+0.0
2,422,424	+		MPMX20_02302	0.70	-1.2
2,422,424	+		MPMX20_02302	0.70	+0.1
2,422,424	+		MPMX20_02302	0.70	+0.6
2,422,424	+		MPMX20_02302	0.70	-0.5
2,422,424	+		MPMX20_02302	0.70	-0.1
2,422,424	+		MPMX20_02302	0.70	+0.6
2,422,424	+		MPMX20_02302	0.70	+0.2
2,422,424	+		MPMX20_02302	0.70	-1.2
2,422,424	+		MPMX20_02302	0.70	-0.2
2,422,424	+		MPMX20_02302	0.70	+0.5
2,422,424	+		MPMX20_02302	0.70	-1.0
2,422,424	+		MPMX20_02302	0.70	-0.1
2,422,424	+		MPMX20_02302	0.70	+0.6
2,422,424	+		MPMX20_02302	0.70	-0.5
2,422,465	+		MPMX20_02302	0.74	-0.2
2,422,465	-		MPMX20_02302	0.74	+0.5
2,422,471	+		MPMX20_02302	0.74	-0.2
2,422,471	+		MPMX20_02302	0.74	-0.2
2,422,473	+		MPMX20_02302	0.74	-2.6
2,422,473	-		MPMX20_02302	0.74	-0.4
2,422,475	+		MPMX20_02302	0.75	-0.1
2,422,481	+		MPMX20_02302	0.75	-1.4
2,422,481	+		MPMX20_02302	0.75	-1.0
2,422,481	+		MPMX20_02302	0.75	+0.6
2,422,481	+		MPMX20_02302	0.75	-1.5
2,422,481	+		MPMX20_02302	0.75	-2.0
2,422,489	-		MPMX20_02302	0.76	-1.7
2,422,491	+		MPMX20_02302	0.76	-0.6
2,422,491	+		MPMX20_02302	0.76	-1.4
2,422,491	+		MPMX20_02302	0.76	-1.2
2,422,491	+		MPMX20_02302	0.76	+0.6
2,422,491	+		MPMX20_02302	0.76	-1.2
2,422,491	+		MPMX20_02302	0.76	-2.2
2,422,491	+		MPMX20_02302	0.76	-0.5
2,422,498	+		MPMX20_02302	0.77	+0.9
2,422,498	+		MPMX20_02302	0.77	+0.8
2,422,498	+		MPMX20_02302	0.77	-1.8
2,422,498	+		MPMX20_02302	0.77	-0.2
2,422,513	+		MPMX20_02302	0.78	-1.0
2,422,513	+		MPMX20_02302	0.78	-1.2
2,422,513	+		MPMX20_02302	0.78	-0.5
2,422,513	+		MPMX20_02302	0.78	+0.2
2,422,541	+		MPMX20_02302	0.80	-1.1
2,422,541	+		MPMX20_02302	0.80	-0.6
2,422,541	+		MPMX20_02302	0.80	+0.8
2,422,616	+		MPMX20_02302	0.86	-1.8
2,422,616	+		MPMX20_02302	0.86	-1.0
2,422,616	+		MPMX20_02302	0.86	-0.5
2,422,616	+		MPMX20_02302	0.86	-0.7
2,422,616	+		MPMX20_02302	0.86	-0.8
2,422,622	+		MPMX20_02302	0.87	-1.4
2,422,624	-		MPMX20_02302	0.87	+0.0
2,422,631	-		MPMX20_02302	0.88	-2.7
2,422,632	+		MPMX20_02302	0.88	-3.2
2,422,633	+		MPMX20_02302	0.88	-0.8
2,422,633	+		MPMX20_02302	0.88	-1.8
2,422,633	+		MPMX20_02302	0.88	+0.0
2,422,633	+		MPMX20_02302	0.88	-3.1
2,422,633	+		MPMX20_02302	0.88	-1.6
2,422,633	+		MPMX20_02302	0.88	-0.5
2,422,633	+		MPMX20_02302	0.88	-0.1
2,422,633	+		MPMX20_02302	0.88	-0.1
2,422,633	+		MPMX20_02302	0.88	-1.8
2,422,641	-		MPMX20_02302	0.89	-1.5
2,422,641	-		MPMX20_02302	0.89	-1.5
2,422,641	-		MPMX20_02302	0.89	-1.6
2,422,646	+		MPMX20_02302	0.89	-1.2
2,422,646	+		MPMX20_02302	0.89	-1.0
2,422,677	+				-1.0
2,422,681	+				-0.8
2,422,681	+				+0.5
2,422,681	+				-0.6
2,422,681	+				-0.1
2,422,696	+				-2.1
2,422,715	+				-0.8
2,422,715	+				-0.3
2,422,718	-				-0.4
2,422,753	+				-1.3
2,422,753	+				+0.6
2,422,753	+				-1.5
2,422,753	+				+0.0
2,422,819	-				-1.8
2,422,903	-				-3.3
2,422,913	-				-1.0
2,422,921	-				-1.4
2,422,921	-				-2.2
2,422,928	-				+0.3
2,422,938	-				-0.9
2,422,938	-				-2.0
2,422,943	-				+0.9
2,422,945	-				-0.7
2,422,945	-				-0.8
2,422,946	-				+0.6
2,422,946	-				-0.1
2,422,946	-				-1.6
2,422,948	-				-0.6
2,422,948	-				-1.1
2,422,953	-				-4.2
2,422,958	-				+0.2
2,422,958	-				-1.5
2,422,958	-				-0.9
2,422,958	-				+0.0
2,422,965	-				-0.2
2,422,965	-				+0.3
2,422,965	-				-0.5
2,422,965	-				-0.5
2,422,965	-				-2.2
2,422,965	-				-1.5
2,422,965	-				+0.3
2,422,965	-				-0.1
2,422,965	-				+1.0
2,422,965	-				-2.4
2,422,965	-				+0.2
2,422,965	-				-1.4
2,422,965	-				-0.7
2,422,965	-				-2.0
2,422,965	-				-0.3
2,422,965	-				-0.4
2,422,965	-				-1.0
2,422,965	-				-1.5
2,422,965	-				-2.5
2,422,967	-				-1.1
2,422,967	-				-2.1
2,422,967	-				-1.0
2,422,967	-				-1.2
2,422,967	-				+0.1
2,422,967	-				-0.3
2,422,967	-				-0.5
2,422,967	-				-1.4
2,422,967	-				-1.0
2,422,967	-				-2.7
2,422,967	-				-0.4
2,422,967	-				-0.9
2,422,986	-				-0.0
2,422,986	-				-0.7
2,423,008	-				+0.5
2,423,008	-				-0.7
2,423,008	-				-0.5
2,423,008	-				-0.3
2,423,008	-				-2.0
2,423,008	-				+1.2
2,423,008	-				-2.8
2,423,008	-				-1.5
2,423,008	-				-0.1
2,423,008	-				-0.6
2,423,008	-				-0.4
2,423,008	-				-0.5
2,423,008	-				+0.3
2,423,008	-				-0.4
2,423,008	-				-0.1
2,423,008	-				-0.2
2,423,008	-				-0.9
2,423,008	-				-2.8
2,423,008	-				-0.5
2,423,008	-				+0.5
2,423,008	-				-2.5
2,423,008	-				-0.1
2,423,008	-				-1.7
2,423,008	-				-1.0
2,423,008	-				+0.4
2,423,008	-				-1.3
2,423,008	-				-2.3
2,423,008	-				-1.2
2,423,008	-				-1.3
2,423,008	-				+0.8
2,423,008	-				-1.0
2,423,008	-				+0.0
2,423,008	-				+1.6
2,423,008	-				-0.4
2,423,008	-				-1.4
2,423,008	-				-1.2
2,423,008	-				+1.6
2,423,008	-				-1.5
2,423,008	-				-1.2
2,423,008	-				+0.3
2,423,008	-				+0.6
2,423,008	-				-1.1
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2,423,008	-				-1.8
2,423,008	-				-2.5
2,423,008	-				-1.5
2,423,008	-				-1.0
2,423,008	-				-0.7
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2,423,008	-				-1.0
2,423,008	-				-0.1
2,423,008	-				-2.2
2,423,008	-				-0.5
2,423,008	-				-1.7
2,423,008	-				+1.4
2,423,008	-				-2.2
2,423,008	-				-0.4
2,423,008	-				+1.3
2,423,008	-				-0.3
2,423,008	-				+0.0
2,423,008	-				-2.0
2,423,008	-				-0.4
2,423,008	-				-0.6
2,423,008	-				-1.8
2,423,009	-				-3.6
2,423,014	-				-0.7
2,423,014	-				-0.9
2,423,021	-				-1.5
2,423,031	-				-2.1
2,423,070	-				-3.0
2,423,084	+				-0.7
2,423,087	-				-1.2
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2,423,108	+				-0.2
2,423,108	+				-0.4
2,423,116	-				-1.5
2,423,116	-				-2.0
2,423,116	-				-1.8
2,423,133	-				+0.0
2,423,142	-				-1.4