Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02290

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4
2,400,763	-		MPMX20_02290	0.19	+1.3
2,400,932	-		MPMX20_02290	0.29	-0.9
2,401,012	-		MPMX20_02290	0.35	-2.8
2,401,043	-		MPMX20_02290	0.37	-1.4
2,401,043	-		MPMX20_02290	0.37	+0.1
2,401,043	-		MPMX20_02290	0.37	-1.4
2,401,062	-		MPMX20_02290	0.38	-1.6
2,401,062	-		MPMX20_02290	0.38	-2.3
2,401,086	-		MPMX20_02290	0.39	-0.8
2,401,095	-		MPMX20_02290	0.40	-0.4
2,401,101	-		MPMX20_02290	0.40	-1.4
2,401,115	-		MPMX20_02290	0.41	-3.0
2,401,132	-		MPMX20_02290	0.42	-0.9
2,401,135	-		MPMX20_02290	0.42	-0.4
2,401,137	-		MPMX20_02290	0.43	-0.2
2,401,141	-		MPMX20_02290	0.43	-1.7
2,401,141	-		MPMX20_02290	0.43	-2.8
2,401,145	-		MPMX20_02290	0.43	+0.6
2,401,145	-		MPMX20_02290	0.43	-0.7
2,401,146	+		MPMX20_02290	0.43	+0.1
2,401,146	-		MPMX20_02290	0.43	-2.6
2,401,164	-		MPMX20_02290	0.44	-2.8
2,401,225	-		MPMX20_02290	0.48	-3.3
2,401,231	-		MPMX20_02290	0.49	-0.9
2,401,232	-		MPMX20_02290	0.49	-0.5
2,401,232	-		MPMX20_02290	0.49	-0.1
2,401,232	-		MPMX20_02290	0.49	-1.2
2,401,255	-		MPMX20_02290	0.50	-0.8
2,401,263	-		MPMX20_02290	0.51	-1.9
2,401,320	-		MPMX20_02290	0.54	-0.8
2,401,341	-		MPMX20_02290	0.56	-0.4
2,401,376	-		MPMX20_02290	0.58	-1.1
2,401,376	-		MPMX20_02290	0.58	-0.7
2,401,376	-		MPMX20_02290	0.58	-0.9
2,401,376	-		MPMX20_02290	0.58	+1.1
2,401,385	-		MPMX20_02290	0.59	-1.5
2,401,395	-		MPMX20_02290	0.59	+0.6
2,401,395	-		MPMX20_02290	0.59	-1.8
2,401,395	-		MPMX20_02290	0.59	-0.6
2,401,395	-		MPMX20_02290	0.59	-1.3
2,401,395	-		MPMX20_02290	0.59	-2.8
2,401,406	-		MPMX20_02290	0.60	-0.9
2,401,408	-		MPMX20_02290	0.60	-0.2
2,401,414	-		MPMX20_02290	0.60	-0.4
2,401,424	-		MPMX20_02290	0.61	-0.9
2,401,424	-		MPMX20_02290	0.61	-0.6
2,401,450	-		MPMX20_02290	0.63	+1.3
2,401,450	-		MPMX20_02290	0.63	-1.4
2,401,450	-		MPMX20_02290	0.63	-0.5
2,401,450	-		MPMX20_02290	0.63	+0.3
2,401,450	-		MPMX20_02290	0.63	+0.3
2,401,450	-		MPMX20_02290	0.63	-1.2
2,401,450	-		MPMX20_02290	0.63	+0.2
2,401,450	-		MPMX20_02290	0.63	-0.1
2,401,450	-		MPMX20_02290	0.63	-0.6
2,401,451	-		MPMX20_02290	0.63	+0.1
2,401,451	-		MPMX20_02290	0.63	-2.2
2,401,451	-		MPMX20_02290	0.63	-1.4
2,401,473	+		MPMX20_02290	0.64	-1.4
2,401,481	-		MPMX20_02290	0.65	-0.5
2,401,481	-		MPMX20_02290	0.65	-2.2
2,401,481	-		MPMX20_02290	0.65	-1.1
2,401,481	-		MPMX20_02290	0.65	+1.1
2,401,481	-		MPMX20_02290	0.65	-0.6
2,401,481	-		MPMX20_02290	0.65	-2.6
2,401,481	-		MPMX20_02290	0.65	-1.2
2,401,481	-		MPMX20_02290	0.65	+1.2
2,401,481	-		MPMX20_02290	0.65	-1.4
2,401,481	-		MPMX20_02290	0.65	-1.7
2,401,481	-		MPMX20_02290	0.65	+1.3
2,401,481	-		MPMX20_02290	0.65	-0.2
2,401,481	-		MPMX20_02290	0.65	+0.6
2,401,481	-		MPMX20_02290	0.65	-0.6
2,401,481	-		MPMX20_02290	0.65	-0.6
2,401,481	-		MPMX20_02290	0.65	-0.7
2,401,481	-		MPMX20_02290	0.65	-1.4
2,401,481	-		MPMX20_02290	0.65	-0.0
2,401,481	-		MPMX20_02290	0.65	+0.6
2,401,481	-		MPMX20_02290	0.65	-1.5
2,401,481	-		MPMX20_02290	0.65	-0.8
2,401,481	-		MPMX20_02290	0.65	-0.6
2,401,481	-		MPMX20_02290	0.65	-1.4
2,401,481	-		MPMX20_02290	0.65	-0.0
2,401,481	-		MPMX20_02290	0.65	-0.1
2,401,481	-		MPMX20_02290	0.65	+0.3
2,401,481	-		MPMX20_02290	0.65	-0.4
2,401,481	-		MPMX20_02290	0.65	+0.3
2,401,481	-		MPMX20_02290	0.65	-0.9
2,401,481	-		MPMX20_02290	0.65	+0.4
2,401,481	-		MPMX20_02290	0.65	-0.9
2,401,481	-		MPMX20_02290	0.65	-0.8
2,401,500	+		MPMX20_02290	0.66	-0.7
2,401,520	+		MPMX20_02290	0.67	-0.9
2,401,536	-		MPMX20_02290	0.68	-1.0
2,401,536	-		MPMX20_02290	0.68	-0.3
2,401,541	-		MPMX20_02290	0.69	+0.5
2,401,569	+		MPMX20_02290	0.70	-1.7
2,401,577	-		MPMX20_02290	0.71	+0.1
2,401,577	-		MPMX20_02290	0.71	-1.5
2,401,585	+		MPMX20_02290	0.72	+0.8
2,401,593	-		MPMX20_02290	0.72	-0.7
2,401,593	-		MPMX20_02290	0.72	+0.1
2,401,632	-		MPMX20_02290	0.75	-0.5
2,401,818	+		MPMX20_02290	0.87	+1.2
2,401,860	-		MPMX20_02290	0.89	-0.4
2,401,860	-		MPMX20_02290	0.89	-1.3
2,401,862	+		MPMX20_02290	0.89	-0.2
2,401,862	+		MPMX20_02290	0.89	+0.1
2,401,862	+		MPMX20_02290	0.89	-0.2
2,401,862	+		MPMX20_02290	0.89	-1.1
2,401,862	+		MPMX20_02290	0.89	-0.1
2,401,862	+		MPMX20_02290	0.89	-0.6
2,401,862	+		MPMX20_02290	0.89	-1.2
2,401,862	+		MPMX20_02290	0.89	+1.1
2,401,862	+		MPMX20_02290	0.89	+0.2
2,401,862	+		MPMX20_02290	0.89	+0.3
2,401,862	+		MPMX20_02290	0.89	+0.1
2,401,862	+		MPMX20_02290	0.89	+1.4
2,401,862	+		MPMX20_02290	0.89	-1.1
2,401,862	+		MPMX20_02290	0.89	-2.1
2,401,862	+		MPMX20_02290	0.89	+0.2
2,401,862	+		MPMX20_02290	0.89	+0.3
2,401,862	+		MPMX20_02290	0.89	-1.4
2,401,862	+		MPMX20_02290	0.89	-0.9
2,401,862	+		MPMX20_02290	0.89	-0.7
2,401,862	+		MPMX20_02290	0.89	-0.2
2,401,862	+		MPMX20_02290	0.89	+0.3
2,401,870	-		MPMX20_02290	0.90	-1.4
2,401,870	-		MPMX20_02290	0.90	-0.4
2,401,870	-		MPMX20_02290	0.90	+0.1
2,401,870	-		MPMX20_02290	0.90	-1.1
2,401,870	-		MPMX20_02290	0.90	-0.1
2,401,870	-		MPMX20_02290	0.90	-0.4
2,401,914	+				-1.8
2,401,914	+				-1.4
2,401,914	+				-0.5
2,401,922	-				-0.1
2,401,922	-				-1.8
2,402,014	-				-1.3
2,402,043	+				+0.6
2,402,051	-				-1.8
2,402,065	+				-0.0
2,402,075	+				-0.2
2,402,085	+				-0.1
2,402,085	+				-0.5
2,402,109	+				-0.1
2,402,109	+				-0.9
2,402,109	+				-0.1
2,402,109	+				+0.4
2,402,109	+				+0.4
2,402,109	+				-0.1
2,402,117	-				-0.4
2,402,117	-				-0.9
2,402,117	-				+2.2
2,402,117	-				+0.5
2,402,123	-				-0.0
2,402,123	-				+0.2
2,402,150	-				-2.2
2,402,150	-				-0.5
2,402,221	-				-0.1
2,402,231	-				-1.4
2,402,244	-				+2.2
2,402,278	+		MPMX20_02291	0.11	-1.0
2,402,361	+		MPMX20_02291	0.14	-1.3
2,402,379	+		MPMX20_02291	0.15	-1.4
2,402,379	+		MPMX20_02291	0.15	+1.4
2,402,382	-		MPMX20_02291	0.15	-0.5
2,402,387	-		MPMX20_02291	0.15	-0.7
2,402,396	+		MPMX20_02291	0.16	-1.2
2,402,399	+		MPMX20_02291	0.16	-0.4
2,402,405	+		MPMX20_02291	0.16	+0.5
2,402,405	+		MPMX20_02291	0.16	+0.6
2,402,425	+		MPMX20_02291	0.17	-0.6
2,402,430	+		MPMX20_02291	0.17	-0.3
2,402,430	+		MPMX20_02291	0.17	+0.5
2,402,430	+		MPMX20_02291	0.17	-1.8
2,402,438	-		MPMX20_02291	0.18	-0.4
2,402,438	-		MPMX20_02291	0.18	+0.1
2,402,438	-		MPMX20_02291	0.18	-0.4
2,402,446	+		MPMX20_02291	0.18	-0.9
2,402,454	-		MPMX20_02291	0.18	-1.7
2,402,457	+		MPMX20_02291	0.18	-0.7
2,402,465	-		MPMX20_02291	0.19	-1.2
2,402,465	-		MPMX20_02291	0.19	-1.3
2,402,486	+		MPMX20_02291	0.20	+0.5
2,402,486	+		MPMX20_02291	0.20	-1.3
2,402,494	-		MPMX20_02291	0.20	-0.9
2,402,494	-		MPMX20_02291	0.20	+0.1
2,402,517	+		MPMX20_02291	0.21	+0.6
2,402,519	+		MPMX20_02291	0.21	-2.6
2,402,524	+		MPMX20_02291	0.21	-1.2
2,402,570	+		MPMX20_02291	0.23	-2.5
2,402,608	-		MPMX20_02291	0.25	-0.7
2,402,622	-		MPMX20_02291	0.25	+0.9
2,402,628	+		MPMX20_02291	0.26	-0.4
2,402,628	+		MPMX20_02291	0.26	+0.0
2,402,628	+		MPMX20_02291	0.26	-0.7
2,402,628	+		MPMX20_02291	0.26	-2.3
2,402,628	+		MPMX20_02291	0.26	-0.4
2,402,636	-		MPMX20_02291	0.26	-2.5
2,402,636	-		MPMX20_02291	0.26	-1.5
2,402,636	-		MPMX20_02291	0.26	-0.9
2,402,655	-		MPMX20_02291	0.27	-2.3
2,402,693	+		MPMX20_02291	0.28	+0.2
2,402,714	-		MPMX20_02291	0.29	-0.4
2,402,715	-		MPMX20_02291	0.29	-1.7
2,402,789	+		MPMX20_02291	0.32	-1.8
2,402,803	+		MPMX20_02291	0.33	-1.9
2,402,806	-		MPMX20_02291	0.33	-0.8
2,402,816	-		MPMX20_02291	0.34	-0.6
2,402,836	-		MPMX20_02291	0.34	-0.9
2,402,836	-		MPMX20_02291	0.34	-0.1
2,402,855	-		MPMX20_02291	0.35	-0.4
2,402,906	+		MPMX20_02291	0.37	-0.4
2,402,906	+		MPMX20_02291	0.37	-1.8
2,402,906	+		MPMX20_02291	0.37	-1.8
2,402,914	-		MPMX20_02291	0.38	-3.2
2,402,914	-		MPMX20_02291	0.38	-3.2
2,402,914	-		MPMX20_02291	0.38	-3.8
2,402,914	-		MPMX20_02291	0.38	-2.1
2,402,914	-		MPMX20_02291	0.38	-2.3
2,402,916	-		MPMX20_02291	0.38	-2.1
2,402,924	+		MPMX20_02291	0.38	+1.1
2,402,927	+		MPMX20_02291	0.38	-1.0
2,402,927	+		MPMX20_02291	0.38	-0.8
2,402,927	+		MPMX20_02291	0.38	-1.7
2,402,927	+		MPMX20_02291	0.38	-0.2
2,402,927	+		MPMX20_02291	0.38	-1.4
2,402,927	+		MPMX20_02291	0.38	-0.3
2,402,935	-		MPMX20_02291	0.39	-1.4
2,402,935	-		MPMX20_02291	0.39	-0.7
2,402,935	-		MPMX20_02291	0.39	-1.6
2,402,935	-		MPMX20_02291	0.39	-1.2
2,402,935	-		MPMX20_02291	0.39	-1.0
2,402,935	-		MPMX20_02291	0.39	-1.9
2,402,935	-		MPMX20_02291	0.39	-2.0
2,402,935	-		MPMX20_02291	0.39	+0.1
2,402,950	+		MPMX20_02291	0.39	-0.4
2,402,950	-		MPMX20_02291	0.39	-0.9
2,402,972	-		MPMX20_02291	0.40	-0.9