Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02246

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4
2,357,773	-		MPMX20_02244	0.74	-0.7
2,357,888	+		MPMX20_02244	0.79	+0.7
2,357,896	-		MPMX20_02244	0.80	-0.5
2,357,904	+		MPMX20_02244	0.80	+1.4
2,357,904	+		MPMX20_02244	0.80	-0.3
2,357,940	-		MPMX20_02244	0.82	-2.3
2,357,973	-		MPMX20_02244	0.84	-2.8
2,357,973	-		MPMX20_02244	0.84	-2.0
2,357,973	-		MPMX20_02244	0.84	-1.3
2,357,973	-		MPMX20_02244	0.84	-0.9
2,357,973	-		MPMX20_02244	0.84	-1.7
2,358,003	-		MPMX20_02244	0.85	-1.8
2,358,030	+		MPMX20_02244	0.87	+3.0
2,358,038	-		MPMX20_02244	0.87	-1.1
2,358,038	-		MPMX20_02244	0.87	-3.4
2,358,040	+		MPMX20_02244	0.87	-0.1
2,358,048	-		MPMX20_02244	0.88	+0.1
2,358,052	+		MPMX20_02244	0.88	+0.6
2,358,052	+		MPMX20_02244	0.88	+0.5
2,358,052	+		MPMX20_02244	0.88	-0.1
2,358,060	-		MPMX20_02244	0.88	-2.6
2,358,060	-		MPMX20_02244	0.88	-1.8
2,358,072	-		MPMX20_02244	0.89	-3.0
2,358,074	+		MPMX20_02244	0.89	+1.9
2,358,074	+		MPMX20_02244	0.89	-0.7
2,358,101	+				-0.8
2,358,101	+				+0.7
2,358,101	+				-0.9
2,358,101	+				-0.1
2,358,127	-				-1.5
2,358,135	+				+0.3
2,358,143	-				-3.0
2,358,143	-				-1.8
2,358,143	-				-2.8
2,358,177	-				-2.0
2,358,221	+				-0.2
2,358,221	+				-0.1
2,358,221	+				-0.3
2,358,221	+				+0.4
2,358,226	+				-0.6
2,358,226	+				+0.1
2,358,226	+				-0.7
2,358,226	+				-1.2
2,358,226	+				-0.1
2,358,228	+				+2.4
2,358,228	+				-0.3
2,358,228	+				+0.0
2,358,228	+				+2.0
2,358,229	-				-0.8
2,358,229	-				-0.5
2,358,229	-				-1.5
2,358,229	-				-1.5
2,358,229	-				+0.2
2,358,234	+				-0.9
2,358,234	+				+0.4
2,358,234	+				-0.3
2,358,234	+				+0.0
2,358,234	+				+0.2
2,358,234	-				-0.9
2,358,234	-				-1.5
2,358,236	-				-2.4
2,358,236	-				-0.1
2,358,241	-				-1.5
2,358,246	-				-1.0
2,358,265	+				+0.1
2,358,275	+				+0.4
2,358,275	+				+0.2
2,358,275	+				+0.3
2,358,275	+				+0.0
2,358,283	-				-1.1
2,358,283	-				-1.7
2,358,283	-				-2.1
2,358,303	+				+0.9
2,358,330	+		MPMX20_02245	0.15	+1.1
2,358,330	+		MPMX20_02245	0.15	+0.1
2,358,332	+		MPMX20_02245	0.16	-0.6
2,358,332	+		MPMX20_02245	0.16	-0.0
2,358,332	+		MPMX20_02245	0.16	-0.8
2,358,332	+		MPMX20_02245	0.16	+0.2
2,358,332	+		MPMX20_02245	0.16	+0.2
2,358,332	+		MPMX20_02245	0.16	-1.8
2,358,332	+		MPMX20_02245	0.16	-0.2
2,358,338	-		MPMX20_02245	0.19	-1.1
2,358,340	-		MPMX20_02245	0.19	-2.2
2,358,340	-		MPMX20_02245	0.19	-3.6
2,358,340	-		MPMX20_02245	0.19	-2.6
2,358,352	+		MPMX20_02245	0.24	-0.7
2,358,353	+		MPMX20_02245	0.25	+0.7
2,358,360	+		MPMX20_02245	0.27	-1.7
2,358,360	+		MPMX20_02245	0.27	-1.8
2,358,360	+		MPMX20_02245	0.27	+0.7
2,358,360	+		MPMX20_02245	0.27	-0.9
2,358,360	+		MPMX20_02245	0.27	-1.2
2,358,360	+		MPMX20_02245	0.27	-1.9
2,358,360	+		MPMX20_02245	0.27	-1.6
2,358,360	+		MPMX20_02245	0.27	-0.7
2,358,360	+		MPMX20_02245	0.27	-0.9
2,358,360	+		MPMX20_02245	0.27	-2.6
2,358,360	+		MPMX20_02245	0.27	-1.7
2,358,360	+		MPMX20_02245	0.27	-0.6
2,358,362	+		MPMX20_02245	0.28	-1.4
2,358,368	-		MPMX20_02245	0.31	-2.2
2,358,368	-		MPMX20_02245	0.31	-3.6
2,358,368	-		MPMX20_02245	0.31	-0.9
2,358,368	-		MPMX20_02245	0.31	-2.4
2,358,368	-		MPMX20_02245	0.31	-3.0
2,358,368	-		MPMX20_02245	0.31	+0.7
2,358,368	-		MPMX20_02245	0.31	-0.2
2,358,368	-		MPMX20_02245	0.31	-2.4
2,358,370	-		MPMX20_02245	0.31	-1.6
2,358,370	-		MPMX20_02245	0.31	-1.5
2,358,375	+		MPMX20_02245	0.33	-1.4
2,358,380	+		MPMX20_02245	0.35	-0.0
2,358,380	+		MPMX20_02245	0.35	-0.1
2,358,383	-		MPMX20_02245	0.37	-2.7
2,358,383	-		MPMX20_02245	0.37	-0.9
2,358,383	-		MPMX20_02245	0.37	-0.5
2,358,395	+		MPMX20_02245	0.41	-1.0
2,358,405	+		MPMX20_02245	0.45	-0.8
2,358,405	+		MPMX20_02245	0.45	+0.1
2,358,405	+		MPMX20_02245	0.45	-1.1
2,358,405	+		MPMX20_02245	0.45	-2.3
2,358,438	+		MPMX20_02245	0.58	+0.2
2,358,440	-		MPMX20_02245	0.59	-2.1
2,358,440	-		MPMX20_02245	0.59	-1.5
2,358,444	+		MPMX20_02245	0.61	+0.5
2,358,444	+		MPMX20_02245	0.61	-1.7
2,358,444	+		MPMX20_02245	0.61	-1.8
2,358,444	+		MPMX20_02245	0.61	-1.0
2,358,444	+		MPMX20_02245	0.61	+0.3
2,358,444	+		MPMX20_02245	0.61	-1.7
2,358,444	+		MPMX20_02245	0.61	-0.5
2,358,444	+		MPMX20_02245	0.61	-0.1
2,358,444	-		MPMX20_02245	0.61	-1.5
2,358,446	+		MPMX20_02245	0.62	-1.1
2,358,452	-		MPMX20_02245	0.64	-2.5
2,358,452	-		MPMX20_02245	0.64	-1.1
2,358,452	-		MPMX20_02245	0.64	-3.1
2,358,453	-		MPMX20_02245	0.64	-2.8
2,358,457	+		MPMX20_02245	0.66	-1.4
2,358,457	+		MPMX20_02245	0.66	-3.4
2,358,457	+		MPMX20_02245	0.66	-1.3
2,358,457	+		MPMX20_02245	0.66	-0.6
2,358,457	+		MPMX20_02245	0.66	+0.7
2,358,457	+		MPMX20_02245	0.66	-2.6
2,358,457	+		MPMX20_02245	0.66	-0.5
2,358,462	+		MPMX20_02245	0.68	-0.2
2,358,465	-		MPMX20_02245	0.69	-1.5
2,358,465	-		MPMX20_02245	0.69	-2.6
2,358,477	-		MPMX20_02245	0.74	-2.2
2,358,488	+		MPMX20_02245	0.78	-3.1
2,358,495	+		MPMX20_02245	0.81	+0.2
2,358,498	-		MPMX20_02245	0.82	-3.0
2,358,500	+		MPMX20_02245	0.83	-0.3
2,358,500	+		MPMX20_02245	0.83	-3.1
2,358,500	+		MPMX20_02245	0.83	-0.5
2,358,500	+		MPMX20_02245	0.83	-0.9
2,358,500	+		MPMX20_02245	0.83	-1.7
2,358,500	+		MPMX20_02245	0.83	-2.2
2,358,508	-		MPMX20_02245	0.86	-2.0
2,358,539	-				-3.5
2,358,547	+				-1.5
2,358,555	-				-1.7
2,358,611	+				+0.7
2,358,611	+				-1.7
2,358,625	+				-0.7
2,358,626	+				-0.2
2,358,640	-				-2.3
2,358,640	-				-3.7
2,358,640	-				-2.5
2,358,700	-				-2.6
2,358,713	+				-3.0
2,358,737	-				-2.7
2,358,738	-				-2.0
2,358,747	+				-1.9
2,358,748	+				-3.2
2,358,780	+				-0.5
2,358,780	+				-1.9
2,358,780	+				-3.2
2,358,788	-				-0.3
2,358,788	-				-1.2
2,358,788	-				-0.0
2,358,790	+				-2.5
2,358,790	+				-0.6
2,358,790	+				-0.1
2,358,790	+				-0.2
2,358,790	+				-0.4
2,358,790	+				-1.8
2,358,790	+				-0.1
2,358,790	+				+1.7
2,358,790	+				-0.9
2,358,798	-				-3.7
2,358,801	+		MPMX20_02246	0.10	-2.9
2,358,801	+		MPMX20_02246	0.10	-2.2
2,358,801	-		MPMX20_02246	0.10	-3.3
2,358,803	+		MPMX20_02246	0.11	-1.2
2,358,818	+		MPMX20_02246	0.15	-0.5
2,358,818	+		MPMX20_02246	0.15	-1.1
2,358,849	+		MPMX20_02246	0.23	-0.7
2,358,857	-		MPMX20_02246	0.26	-2.4
2,358,869	-		MPMX20_02246	0.29	-2.5
2,358,884	+		MPMX20_02246	0.33	-0.4
2,358,905	+		MPMX20_02246	0.39	-0.3
2,358,905	+		MPMX20_02246	0.39	-0.1
2,358,905	+		MPMX20_02246	0.39	-1.6
2,358,905	+		MPMX20_02246	0.39	-3.7
2,358,911	+		MPMX20_02246	0.40	-1.2
2,358,913	-		MPMX20_02246	0.41	-0.3
2,358,913	-		MPMX20_02246	0.41	-1.5
2,358,919	-		MPMX20_02246	0.43	-1.2
2,358,919	-		MPMX20_02246	0.43	-2.3
2,358,919	-		MPMX20_02246	0.43	-1.4
2,358,919	-		MPMX20_02246	0.43	-1.5
2,358,919	-		MPMX20_02246	0.43	-1.3
2,358,919	-		MPMX20_02246	0.43	-1.2
2,358,919	-		MPMX20_02246	0.43	-0.1
2,358,935	+		MPMX20_02246	0.47	-3.4
2,358,947	+		MPMX20_02246	0.50	-1.8
2,358,947	+		MPMX20_02246	0.50	-1.4
2,358,947	+		MPMX20_02246	0.50	-2.3
2,358,947	+		MPMX20_02246	0.50	+0.3
2,358,947	+		MPMX20_02246	0.50	-1.4
2,358,955	-		MPMX20_02246	0.53	-0.1
2,358,955	-		MPMX20_02246	0.53	-3.6
2,358,961	-		MPMX20_02246	0.54	+0.4
2,358,965	-		MPMX20_02246	0.55	+1.7
2,358,965	-		MPMX20_02246	0.55	+0.7
2,358,967	+		MPMX20_02246	0.56	-2.2
2,358,968	-		MPMX20_02246	0.56	-1.7
2,358,973	+		MPMX20_02246	0.58	-0.6
2,358,973	+		MPMX20_02246	0.58	+0.7
2,358,981	+		MPMX20_02246	0.60	-2.3
2,359,025	-		MPMX20_02246	0.72	-1.8
2,359,035	+		MPMX20_02246	0.75	+1.1
2,359,051	+		MPMX20_02246	0.79	-0.6
2,359,057	-		MPMX20_02246	0.81	-0.7
2,359,062	+		MPMX20_02246	0.82	-2.1
2,359,070	-		MPMX20_02246	0.84	-1.7
2,359,074	+		MPMX20_02246	0.85	-0.9
2,359,074	+		MPMX20_02246	0.85	-1.3
2,359,082	-		MPMX20_02246	0.88	-0.8
2,359,085	+		MPMX20_02246	0.88	-0.8
2,359,085	+		MPMX20_02246	0.88	-1.4
2,359,085	+		MPMX20_02246	0.88	-1.6
2,359,087	-		MPMX20_02246	0.89	-0.5
2,359,093	-				-0.2
2,359,093	-				-2.1
2,359,093	-				-0.7
2,359,120	+				-3.3
2,359,128	-				-2.3
2,359,134	+				-2.9
2,359,134	+				+0.7
2,359,142	-				-2.2
2,359,142	-				-3.2
2,359,142	-				-0.4
2,359,164	+				-1.2
2,359,187	+				+0.7
2,359,187	+				-1.1
2,359,187	+				+0.0
2,359,187	+				-0.5
2,359,187	+				-0.1
2,359,187	+				+0.2
2,359,187	+				-2.2
2,359,187	+				+0.6
2,359,187	+				-0.6
2,359,187	+				-0.2
2,359,187	+				+0.2
2,359,187	+				-0.0
2,359,187	+				-1.3
2,359,187	+				-1.0
2,359,187	+				-0.5
2,359,187	+				-0.5
2,359,187	+				+0.3
2,359,187	+				-1.5
2,359,187	+				+0.7
2,359,187	+				+0.8
2,359,187	+				+1.6
2,359,187	+				+0.8
2,359,187	+				-0.4
2,359,187	+				-0.0
2,359,187	+				+0.3
2,359,187	+				+0.3
2,359,187	+				-0.9
2,359,187	+				-0.4
2,359,187	+				+0.1
2,359,195	+				-1.3
2,359,195	+				+0.9
2,359,195	-				+0.1
2,359,195	-				+1.3
2,359,195	-				+0.0
2,359,195	-				+0.6
2,359,195	-				-2.9
2,359,195	-				-1.3
2,359,195	-				-0.8
2,359,195	-				+0.7
2,359,195	-				-1.6
2,359,195	-				-1.3
2,359,195	-				-0.8
2,359,195	-				-1.8
2,359,195	-				-0.4
2,359,195	-				+0.7
2,359,195	-				-1.8
2,359,195	-				+0.3
2,359,195	-				+0.3
2,359,195	-				+0.6
2,359,195	-				-1.0
2,359,195	-				+0.5
2,359,195	-				-0.2
2,359,195	-				-0.5
2,359,195	-				-0.6
2,359,195	-				-1.8
2,359,195	-				+0.1
2,359,195	-				-1.3
2,359,195	-				+0.4
2,359,195	-				-2.0
2,359,195	-				-0.1
2,359,195	-				+0.1
2,359,195	-				-0.8
2,359,195	-				+0.4
2,359,195	-				-0.9
2,359,195	-				-0.6
2,359,195	-				-0.8
2,359,195	-				-0.8
2,359,195	-				-1.0
2,359,195	-				-0.3
2,359,195	-				-0.8
2,359,195	-				+0.1
2,359,195	-				+0.1
2,359,195	-				-0.7
2,359,195	-				-1.5
2,359,198	-				+0.3
2,359,203	-				-2.3
2,359,205	+				-1.7
2,359,299	-				-0.2
2,359,306	-				+0.7
2,359,328	-				-0.4
2,359,328	-				+0.9
2,359,339	-				+0.7
2,359,364	+				-2.3
2,359,364	+				-0.3
2,359,372	-				+0.1
2,359,372	-				+0.4
2,359,372	-				-0.5
2,359,372	-				+0.3
2,359,372	-				-0.2
2,359,372	-				-1.3
2,359,372	-				-1.2
2,359,372	-				+0.7
2,359,372	-				-2.3
2,359,372	-				-0.3
2,359,372	-				-0.2
2,359,379	+				-2.7
2,359,387	-		MPMX20_02247	0.10	+0.6
2,359,387	-		MPMX20_02247	0.10	+0.8
2,359,389	+		MPMX20_02247	0.10	-1.2
2,359,389	+		MPMX20_02247	0.10	-3.5
2,359,410	-		MPMX20_02247	0.12	-0.8
2,359,410	-		MPMX20_02247	0.12	+1.1
2,359,414	-		MPMX20_02247	0.13	-1.2
2,359,521	+		MPMX20_02247	0.23	+0.9
2,359,548	+		MPMX20_02247	0.26	+1.2
2,359,556	-		MPMX20_02247	0.27	+0.3
2,359,613	+		MPMX20_02247	0.32	+0.0
2,359,700	-		MPMX20_02247	0.41	+0.8
2,359,700	-		MPMX20_02247	0.41	+1.1
2,359,739	-		MPMX20_02247	0.45	+0.5
2,359,751	-		MPMX20_02247	0.46	-0.3
2,359,801	+		MPMX20_02247	0.51	-0.7
2,359,821	+		MPMX20_02247	0.53	-0.1
2,359,928	-		MPMX20_02247	0.63	-1.0
2,359,966	+		MPMX20_02247	0.67	-0.0
2,360,052	+		MPMX20_02247	0.76	+1.1
2,360,052	+		MPMX20_02247	0.76	-0.4
2,360,053	+		MPMX20_02247	0.76	-0.9
2,360,108	-		MPMX20_02247	0.81	-1.2
2,360,110	+		MPMX20_02247	0.81	+0.2
2,360,118	-		MPMX20_02247	0.82	+0.3