Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01408

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4
1,470,722	+		MPMX20_01407	0.68	+0.1
1,470,870	-		MPMX20_01407	0.89	+0.7
1,470,959	+				+0.4
1,470,983	-				-1.1
1,471,123	-				-0.5
1,471,287	+				+1.3
1,471,319	-				-0.0
1,471,361	-				+0.9
1,471,462	-				-0.2
1,471,520	-				-0.2
1,471,703	+				-1.2
1,471,845	-				-1.7
1,471,892	-				-1.0
1,471,893	-				-1.7
1,471,917	+		MPMX20_01408	0.11	-1.9
1,471,917	+		MPMX20_01408	0.11	-2.7
1,471,917	+		MPMX20_01408	0.11	-2.8
1,471,917	+		MPMX20_01408	0.11	-0.4
1,471,925	-		MPMX20_01408	0.11	-1.2
1,471,925	-		MPMX20_01408	0.11	-1.7
1,471,925	-		MPMX20_01408	0.11	-4.2
1,471,990	-		MPMX20_01408	0.14	-1.9
1,472,013	-		MPMX20_01408	0.15	-1.3
1,472,215	+		MPMX20_01408	0.25	-2.8
1,472,223	-		MPMX20_01408	0.26	+0.1
1,472,233	-		MPMX20_01408	0.26	-4.0
1,472,370	-		MPMX20_01408	0.33	-3.2
1,472,426	-		MPMX20_01408	0.36	-2.3
1,472,426	-		MPMX20_01408	0.36	-1.9
1,472,426	-		MPMX20_01408	0.36	-3.6
1,472,447	+		MPMX20_01408	0.37	-3.0
1,472,447	+		MPMX20_01408	0.37	+1.7
1,472,487	+		MPMX20_01408	0.39	-1.8
1,472,495	-		MPMX20_01408	0.39	-1.5
1,472,510	+		MPMX20_01408	0.40	-2.8
1,472,518	-		MPMX20_01408	0.40	-3.4
1,472,563	-		MPMX20_01408	0.43	-0.7
1,472,645	+		MPMX20_01408	0.47	-1.3
1,472,761	+		MPMX20_01408	0.53	-1.3
1,472,817	+		MPMX20_01408	0.55	-2.1
1,472,992	-		MPMX20_01408	0.64	-3.0
1,472,994	+		MPMX20_01408	0.64	-1.0
1,473,095	+		MPMX20_01408	0.69	-1.5
1,473,095	+		MPMX20_01408	0.69	-1.8
1,473,095	+		MPMX20_01408	0.69	-3.3
1,473,152	+		MPMX20_01408	0.72	+0.3
1,473,206	+		MPMX20_01408	0.75	-2.6
1,473,206	+		MPMX20_01408	0.75	-2.3
1,473,209	-		MPMX20_01408	0.75	-0.8
1,473,214	-		MPMX20_01408	0.75	-1.0
1,473,226	+		MPMX20_01408	0.76	+0.8
1,473,226	+		MPMX20_01408	0.76	-2.5
1,473,226	+		MPMX20_01408	0.76	-3.5
1,473,226	+		MPMX20_01408	0.76	-2.3
1,473,234	-		MPMX20_01408	0.76	-1.2
1,473,236	+		MPMX20_01408	0.76	-1.5
1,473,307	+		MPMX20_01408	0.80	-2.4
1,473,449	+		MPMX20_01408	0.87	-4.0
1,473,452	-		MPMX20_01408	0.87	-3.1
1,473,499	+		MPMX20_01408	0.89	-1.7
1,473,507	-		MPMX20_01408	0.90	-1.0
1,473,507	-		MPMX20_01408	0.90	-0.5
1,473,507	-		MPMX20_01408	0.90	-1.9
1,473,507	-		MPMX20_01408	0.90	-2.0
1,473,507	-		MPMX20_01408	0.90	-3.4
1,473,507	-		MPMX20_01408	0.90	-0.7
1,473,642	-				-0.9
1,473,707	-				+0.2
1,473,771	-				-1.1
1,473,781	+				+0.7
1,473,836	-				+0.1
1,473,845	+				+0.3
1,473,848	+				-0.5
1,473,848	+				+0.3
1,473,899	-		MPMX20_01409	0.10	+0.3
1,474,088	-		MPMX20_01409	0.31	+1.1
1,474,178	+		MPMX20_01409	0.41	-0.1
1,474,205	+		MPMX20_01409	0.44	+0.3
1,474,213	-		MPMX20_01409	0.45	-1.3
1,474,271	-		MPMX20_01409	0.51	-0.7
1,474,271	-		MPMX20_01409	0.51	+0.3
1,474,350	-		MPMX20_01409	0.60	+0.6
1,474,610	+		MPMX20_01409	0.89	-0.1
1,474,610	+		MPMX20_01409	0.89	-1.0
1,474,610	+		MPMX20_01409	0.89	-0.0
1,474,618	-		MPMX20_01409	0.90	-0.4
1,474,618	-		MPMX20_01409	0.90	+0.1
1,474,629	-				+2.7
1,474,647	+				-0.9
1,474,647	+				-0.3
1,474,647	+				+1.2
1,474,647	+				-0.7
1,474,647	+				-0.2
1,474,655	-				+1.3
1,474,655	-				+0.2
1,474,655	-				+0.1
1,474,655	-				+0.6
1,474,655	-				+0.5
1,474,699	-				-1.0