Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01387

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4
1,448,570	-		MPMX20_01386	0.23	-1.5
1,448,592	-		MPMX20_01386	0.25	-2.7
1,448,635	+		MPMX20_01386	0.30	-2.4
1,448,638	-		MPMX20_01386	0.30	-1.4
1,448,662	+		MPMX20_01386	0.32	-0.7
1,448,662	+		MPMX20_01386	0.32	-2.4
1,448,664	+		MPMX20_01386	0.33	+0.6
1,448,664	+		MPMX20_01386	0.33	-3.3
1,448,665	-		MPMX20_01386	0.33	-4.5
1,448,670	-		MPMX20_01386	0.33	-1.2
1,448,670	-		MPMX20_01386	0.33	-2.1
1,448,670	-		MPMX20_01386	0.33	-2.4
1,448,746	+		MPMX20_01386	0.41	-2.7
1,448,765	+		MPMX20_01386	0.42	-1.4
1,448,790	+		MPMX20_01386	0.45	-2.4
1,448,810	-		MPMX20_01386	0.47	-1.9
1,448,812	+		MPMX20_01386	0.47	-1.4
1,448,832	+		MPMX20_01386	0.49	-2.1
1,448,868	+		MPMX20_01386	0.53	-0.5
1,448,933	-		MPMX20_01386	0.59	-2.7
1,449,089	+		MPMX20_01386	0.74	+0.4
1,449,191	+		MPMX20_01386	0.84	-0.2
1,449,243	+		MPMX20_01386	0.89	-0.9
1,449,305	-				+0.1
1,449,388	+				-0.3
1,449,534	+				-0.1
1,449,542	-				+2.0
1,449,681	+				+0.7
1,449,689	-				-0.2
1,449,700	+		MPMX20_01387	0.10	-0.2
1,449,726	+		MPMX20_01387	0.12	+1.4
1,449,733	-		MPMX20_01387	0.12	+0.7
1,449,734	-		MPMX20_01387	0.12	-0.4
1,449,734	-		MPMX20_01387	0.12	-0.7
1,449,734	-		MPMX20_01387	0.12	-0.5
1,449,735	+		MPMX20_01387	0.12	+0.6
1,449,762	+		MPMX20_01387	0.14	+0.3
1,449,777	-		MPMX20_01387	0.15	+0.6
1,449,794	+		MPMX20_01387	0.16	+0.6
1,449,804	+		MPMX20_01387	0.17	+0.8
1,449,886	+		MPMX20_01387	0.23	-0.3
1,449,894	-		MPMX20_01387	0.23	+1.7
1,449,894	-		MPMX20_01387	0.23	-0.4
1,449,947	+		MPMX20_01387	0.27	+0.5
1,449,952	+		MPMX20_01387	0.27	-0.3
1,449,955	-		MPMX20_01387	0.27	+1.1
1,449,960	-		MPMX20_01387	0.28	-0.1
1,449,962	+		MPMX20_01387	0.28	-0.0
1,449,962	+		MPMX20_01387	0.28	-0.4
1,449,962	+		MPMX20_01387	0.28	-0.2
1,449,975	-		MPMX20_01387	0.29	+0.3
1,449,975	-		MPMX20_01387	0.29	+0.1
1,450,067	+		MPMX20_01387	0.35	+0.5
1,450,075	-		MPMX20_01387	0.36	+1.0
1,450,087	+		MPMX20_01387	0.36	+0.0
1,450,201	-		MPMX20_01387	0.44	-0.2
1,450,238	+		MPMX20_01387	0.47	-0.4
1,450,301	+		MPMX20_01387	0.51	-0.4
1,450,301	+		MPMX20_01387	0.51	+0.3
1,450,316	+		MPMX20_01387	0.52	+1.1
1,450,395	-		MPMX20_01387	0.57	-1.2
1,450,463	+		MPMX20_01387	0.62	-0.9
1,450,465	+		MPMX20_01387	0.62	-0.2
1,450,471	-		MPMX20_01387	0.62	-0.4
1,450,471	-		MPMX20_01387	0.62	-0.9
1,450,471	-		MPMX20_01387	0.62	+0.9
1,450,473	-		MPMX20_01387	0.63	-0.0
1,450,479	-		MPMX20_01387	0.63	-0.7
1,450,496	+		MPMX20_01387	0.64	-0.6
1,450,500	+		MPMX20_01387	0.64	-0.1
1,450,504	-		MPMX20_01387	0.65	+1.6
1,450,515	+		MPMX20_01387	0.65	+0.0
1,450,541	-		MPMX20_01387	0.67	-0.8
1,450,554	+		MPMX20_01387	0.68	-0.8
1,450,559	+		MPMX20_01387	0.68	-0.6
1,450,559	+		MPMX20_01387	0.68	+0.0
1,450,579	+		MPMX20_01387	0.70	-0.7
1,450,585	-		MPMX20_01387	0.70	-0.1
1,450,736	-		MPMX20_01387	0.80	+0.4
1,450,752	+		MPMX20_01387	0.81	-0.5
1,450,775	+		MPMX20_01387	0.83	+0.2
1,450,775	+		MPMX20_01387	0.83	-1.5
1,450,810	+		MPMX20_01387	0.85	-0.4
1,450,852	+		MPMX20_01387	0.88	-1.2
1,450,852	+		MPMX20_01387	0.88	-0.7
1,450,852	+		MPMX20_01387	0.88	+0.5
1,450,852	+		MPMX20_01387	0.88	-0.6
1,450,852	+		MPMX20_01387	0.88	+0.5
1,450,852	+		MPMX20_01387	0.88	+1.1
1,450,852	+		MPMX20_01387	0.88	+0.5
1,450,852	+		MPMX20_01387	0.88	+0.2
1,450,860	-		MPMX20_01387	0.89	-0.1
1,450,860	-		MPMX20_01387	0.89	-0.3
1,450,860	-		MPMX20_01387	0.89	-0.1
1,450,860	-		MPMX20_01387	0.89	+0.1
1,450,860	-		MPMX20_01387	0.89	+0.5
1,450,870	+		MPMX20_01387	0.89	-1.1
1,450,895	-				+1.2
1,450,895	-				+0.3
1,450,932	+				-0.3
1,450,932	+				+0.3
1,450,940	-				+1.1
1,450,940	-				-1.9
1,450,970	+				-0.2
1,450,978	-				+0.6
1,451,068	-				-0.9
1,451,090	+				-0.9
1,451,093	+				+0.4
1,451,181	-		MPMX20_01388	0.11	+0.0
1,451,184	+		MPMX20_01388	0.12	-1.3
1,451,186	-		MPMX20_01388	0.12	-1.0
1,451,196	+		MPMX20_01388	0.13	+0.6
1,451,196	+		MPMX20_01388	0.13	-0.7
1,451,204	-		MPMX20_01388	0.14	+0.6
1,451,204	-		MPMX20_01388	0.14	-1.3
1,451,204	-		MPMX20_01388	0.14	+0.8
1,451,204	-		MPMX20_01388	0.14	+1.0
1,451,204	-		MPMX20_01388	0.14	-1.7
1,451,218	+		MPMX20_01388	0.16	-0.7
1,451,223	+		MPMX20_01388	0.17	+0.4
1,451,235	+		MPMX20_01388	0.18	+1.1
1,451,243	-		MPMX20_01388	0.19	-0.2
1,451,243	-		MPMX20_01388	0.19	+0.4
1,451,243	-		MPMX20_01388	0.19	+0.2
1,451,243	-		MPMX20_01388	0.19	-0.5
1,451,315	+		MPMX20_01388	0.28	+1.4
1,451,357	+		MPMX20_01388	0.34	+0.3
1,451,459	-		MPMX20_01388	0.47	-1.6
1,451,620	-		MPMX20_01388	0.67	+0.7
1,451,639	-		MPMX20_01388	0.69	-0.8
1,451,649	+		MPMX20_01388	0.71	+0.6
1,451,703	+		MPMX20_01388	0.77	+0.2
1,451,703	+		MPMX20_01388	0.77	+0.1
1,451,761	+		MPMX20_01388	0.85	-0.2
1,451,761	+		MPMX20_01388	0.85	-0.3
1,451,839	-				-0.7
1,451,850	+				-1.1
1,451,850	+				+0.4
1,451,850	+				+0.1
1,451,877	+				+0.3
1,451,877	+				+0.8
1,451,877	+				-0.1
1,451,877	+				-0.4
1,451,885	-				-1.0
1,451,885	-				-0.2
1,451,885	-				-0.2
1,451,885	-				-0.1
1,451,885	-				+0.1
1,451,885	-				+0.1
1,451,885	-				+1.6
1,451,885	-				+0.4
1,451,885	-				-0.9
1,451,918	+				-0.2
1,451,933	+				+0.2
1,451,976	+				+0.2
1,451,976	+				-1.3
1,451,984	-				+0.2
1,451,984	-				-0.9