Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01304

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4
1,364,341	-		MPMX20_01302	0.84	+0.7
1,364,358	-		MPMX20_01302	0.85	-0.5
1,364,358	-		MPMX20_01302	0.85	-2.1
1,364,409	-				-0.4
1,364,414	+				-1.3
1,364,414	+				+0.0
1,364,429	+				+1.7
1,364,435	+				-0.2
1,364,484	+				-0.2
1,364,487	-				+0.6
1,364,488	-				-0.5
1,364,499	-				+0.6
1,364,617	-				+2.3
1,364,617	-				+1.9
1,364,632	-				+2.0
1,364,860	+		MPMX20_01303	0.34	+1.6
1,364,879	+		MPMX20_01303	0.36	+1.6
1,364,881	+		MPMX20_01303	0.37	+2.1
1,364,881	+		MPMX20_01303	0.37	+0.7
1,364,887	-		MPMX20_01303	0.37	+1.6
1,365,029	+		MPMX20_01303	0.57	+0.7
1,365,044	+		MPMX20_01303	0.59	+2.1
1,365,196	-		MPMX20_01303	0.80	+1.6
1,365,205	+		MPMX20_01303	0.81	+1.6
1,365,382	+				+1.9
1,365,537	+		MPMX20_01304	0.29	+1.6
1,365,587	-		MPMX20_01304	0.36	+1.6
1,365,627	+		MPMX20_01304	0.42	+2.5
1,365,627	+		MPMX20_01304	0.42	+1.1
1,365,635	-		MPMX20_01304	0.44	+1.1
1,365,635	-		MPMX20_01304	0.44	+0.7
1,365,635	-		MPMX20_01304	0.44	+2.0
1,365,635	-		MPMX20_01304	0.44	+2.0
1,365,698	-		MPMX20_01304	0.53	+1.5
1,365,720	-		MPMX20_01304	0.56	-0.3
1,365,795	-		MPMX20_01304	0.67	+2.6
1,365,800	-		MPMX20_01304	0.68	+1.5
1,365,809	+		MPMX20_01304	0.69	+0.7
1,365,836	+		MPMX20_01304	0.73	+2.1
1,365,914	+		MPMX20_01304	0.85	+2.6
1,366,071	-				+2.1
1,366,103	-		MPMX20_01305	0.12	+1.9
1,366,265	+		MPMX20_01305	0.34	+2.5
1,366,275	+		MPMX20_01305	0.35	+1.4
1,366,300	-		MPMX20_01305	0.38	+1.1
1,366,323	-		MPMX20_01305	0.42	+2.2
1,366,388	+		MPMX20_01305	0.50	+1.9
1,366,388	+		MPMX20_01305	0.50	+2.5
1,366,396	-		MPMX20_01305	0.51	+2.0
1,366,398	+		MPMX20_01305	0.52	+2.3
1,366,406	-		MPMX20_01305	0.53	+1.2
1,366,406	-		MPMX20_01305	0.53	+2.1
1,366,406	-		MPMX20_01305	0.53	+0.9
1,366,410	+		MPMX20_01305	0.53	+1.5
1,366,485	+		MPMX20_01305	0.63	+0.9
1,366,590	-		MPMX20_01305	0.78	+2.1
1,366,590	-		MPMX20_01305	0.78	+2.5
1,366,609	-		MPMX20_01305	0.80	+1.7
1,366,647	-		MPMX20_01305	0.85	+1.8
1,366,651	-		MPMX20_01305	0.86	+2.1
1,366,665	+		MPMX20_01305	0.88	+1.7
1,366,673	-		MPMX20_01305	0.89	+1.5
1,366,673	-		MPMX20_01305	0.89	+1.7
1,366,738	+				+1.6
1,366,834	-				-0.4
1,366,846	+				+1.3
1,366,846	+				+1.5
1,366,889	-				-0.8
1,366,936	+				+3.4
1,366,956	-				+1.2