Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01170

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4
1,231,366	-				+0.7
1,231,366	-				+0.5
1,231,369	+				+0.1
1,231,398	-				+0.7
1,231,403	-				-0.7
1,231,412	+				-0.2
1,231,417	+				-0.9
1,231,420	-				+0.1
1,231,425	+				-1.5
1,231,425	-				-0.1
1,231,451	+				+0.4
1,231,455	-				-0.4
1,231,460	+				+0.2
1,231,465	+				+0.3
1,231,465	+				-0.8
1,231,473	-				-0.5
1,231,511	+				+1.1
1,231,543	-				+0.0
1,231,543	-				+0.7
1,231,543	-				+0.9
1,231,544	-				-0.7
1,231,590	-				-0.2
1,231,604	+				+1.5
1,231,622	-		MPMX20_01169	0.12	+0.7
1,231,671	+		MPMX20_01169	0.24	-0.0
1,231,677	-		MPMX20_01169	0.25	-1.6
1,231,693	+		MPMX20_01169	0.29	-0.9
1,231,697	+		MPMX20_01169	0.29	-0.0
1,231,700	-		MPMX20_01169	0.30	+1.7
1,231,741	+		MPMX20_01169	0.39	+0.8
1,231,748	-		MPMX20_01169	0.41	-0.9
1,231,748	-		MPMX20_01169	0.41	+1.9
1,231,772	+		MPMX20_01169	0.47	+0.2
1,231,780	+		MPMX20_01169	0.48	-0.7
1,231,810	+		MPMX20_01169	0.55	-0.5
1,231,839	+		MPMX20_01169	0.62	+0.7
1,231,847	-		MPMX20_01169	0.64	+0.8
1,231,850	-		MPMX20_01169	0.64	-0.3
1,231,862	+		MPMX20_01169	0.67	-0.2
1,231,918	-		MPMX20_01169	0.80	-0.7
1,231,942	+		MPMX20_01169	0.85	+0.8
1,231,942	+		MPMX20_01169	0.85	+0.4
1,231,942	+		MPMX20_01169	0.85	-0.7
1,231,942	+		MPMX20_01169	0.85	-0.7
1,231,950	-		MPMX20_01169	0.87	+0.5
1,231,950	-		MPMX20_01169	0.87	+0.0
1,232,002	-				-1.2
1,232,004	+				+0.1
1,232,004	+				-0.7
1,232,004	+				-0.8
1,232,012	-				+0.6
1,232,012	-				-0.3
1,232,027	+				-0.1
1,232,084	+				+0.2
1,232,104	+				+0.9
1,232,104	+				+0.3
1,232,104	+				-1.0
1,232,104	+				-1.3
1,232,104	+				+0.5
1,232,112	-				-0.5
1,232,114	+				-0.7
1,232,114	+				+0.2
1,232,114	+				-0.3
1,232,114	+				-0.5
1,232,117	-				-0.5
1,232,117	-				+0.3
1,232,122	-				+0.9
1,232,122	-				-1.1
1,232,122	-				+0.3
1,232,122	-				-1.1
1,232,122	-				-1.3
1,232,122	-				+1.7
1,232,134	+				-0.1
1,232,134	+				+0.2
1,232,147	+				-2.0
1,232,168	+				+0.2
1,232,181	+				+0.3
1,232,181	+				-2.0
1,232,186	-				-1.1
1,232,189	-				-0.3
1,232,189	-				+0.1
1,232,189	-				+1.0
1,232,191	+				-0.6
1,232,214	+				-0.5
1,232,215	+				-0.7
1,232,222	-				-0.5
1,232,223	-				-0.2
1,232,223	-				-0.3
1,232,229	+				+0.2
1,232,239	+				-2.2
1,232,245	+				+0.2
1,232,250	+				-2.1
1,232,250	+				+0.2
1,232,253	-				-0.9
1,232,253	-				-1.5
1,232,258	-				-3.3
1,232,258	-				-0.1
1,232,268	+				-1.0
1,232,268	+				+1.7
1,232,275	+				-0.7
1,232,275	+				+0.3
1,232,275	+				+1.1
1,232,283	+				+0.0
1,232,299	-				+0.7
1,232,302	+				-1.1
1,232,302	+				-1.3
1,232,314	+				+0.1
1,232,326	+				-1.5
1,232,336	+				-1.0
1,232,336	+				-0.1
1,232,336	+				+0.7
1,232,393	-				-1.8
1,232,402	+		MPMX20_01170	0.12	+0.8
1,232,402	+		MPMX20_01170	0.12	-3.0
1,232,402	+		MPMX20_01170	0.12	-1.1
1,232,402	+		MPMX20_01170	0.12	+0.4
1,232,407	+		MPMX20_01170	0.13	-0.9
1,232,407	+		MPMX20_01170	0.13	-1.7
1,232,410	-		MPMX20_01170	0.14	-2.1
1,232,410	-		MPMX20_01170	0.14	-0.1
1,232,410	-		MPMX20_01170	0.14	-1.7
1,232,410	-		MPMX20_01170	0.14	-0.6
1,232,410	-		MPMX20_01170	0.14	-1.3
1,232,410	-		MPMX20_01170	0.14	-1.1
1,232,410	-		MPMX20_01170	0.14	-1.4
1,232,414	+		MPMX20_01170	0.15	-0.6
1,232,414	+		MPMX20_01170	0.15	-0.4
1,232,414	+		MPMX20_01170	0.15	-0.7
1,232,415	-		MPMX20_01170	0.15	-0.8
1,232,415	-		MPMX20_01170	0.15	-1.9
1,232,415	-		MPMX20_01170	0.15	-3.0
1,232,420	+		MPMX20_01170	0.17	-1.3
1,232,422	+		MPMX20_01170	0.17	-2.4
1,232,422	+		MPMX20_01170	0.17	+0.7
1,232,423	-		MPMX20_01170	0.17	-1.5
1,232,430	-		MPMX20_01170	0.19	+2.2
1,232,446	+		MPMX20_01170	0.23	-0.3
1,232,454	-		MPMX20_01170	0.25	-0.7
1,232,454	-		MPMX20_01170	0.25	-1.6
1,232,454	-		MPMX20_01170	0.25	-1.9
1,232,462	+		MPMX20_01170	0.27	+0.7
1,232,565	+		MPMX20_01170	0.53	-1.1
1,232,565	+		MPMX20_01170	0.53	+0.4
1,232,565	+		MPMX20_01170	0.53	-1.9
1,232,565	+		MPMX20_01170	0.53	-1.3
1,232,565	+		MPMX20_01170	0.53	-0.7
1,232,573	-		MPMX20_01170	0.55	-0.7
1,232,592	+		MPMX20_01170	0.60	+1.7
1,232,598	+		MPMX20_01170	0.62	-2.7
1,232,598	+		MPMX20_01170	0.62	-2.3
1,232,598	+		MPMX20_01170	0.62	-1.5
1,232,599	+		MPMX20_01170	0.62	-0.4
1,232,606	+		MPMX20_01170	0.64	+1.3
1,232,607	-		MPMX20_01170	0.64	-2.2
1,232,607	-		MPMX20_01170	0.64	+0.1
1,232,611	+		MPMX20_01170	0.65	-0.5
1,232,611	+		MPMX20_01170	0.65	-1.8
1,232,611	+		MPMX20_01170	0.65	-1.5
1,232,611	+		MPMX20_01170	0.65	-2.5
1,232,611	+		MPMX20_01170	0.65	+0.5
1,232,614	-		MPMX20_01170	0.66	-0.8
1,232,615	-		MPMX20_01170	0.66	-1.7
1,232,616	+		MPMX20_01170	0.66	-1.4
1,232,621	+		MPMX20_01170	0.67	-2.0
1,232,621	+		MPMX20_01170	0.67	-0.5
1,232,621	+		MPMX20_01170	0.67	-0.7
1,232,621	+		MPMX20_01170	0.67	-0.6
1,232,623	-		MPMX20_01170	0.68	-0.3
1,232,629	-		MPMX20_01170	0.69	-1.9
1,232,629	-		MPMX20_01170	0.69	-1.7
1,232,629	-		MPMX20_01170	0.69	-3.0
1,232,632	+		MPMX20_01170	0.70	-0.9
1,232,643	+		MPMX20_01170	0.73	-1.5
1,232,643	+		MPMX20_01170	0.73	-0.5
1,232,643	+		MPMX20_01170	0.73	+0.0
1,232,643	+		MPMX20_01170	0.73	-1.5
1,232,649	-		MPMX20_01170	0.74	-0.3
1,232,653	+		MPMX20_01170	0.76	-3.1
1,232,653	+		MPMX20_01170	0.76	-1.1
1,232,653	+		MPMX20_01170	0.76	-1.3
1,232,653	+		MPMX20_01170	0.76	-2.2
1,232,653	+		MPMX20_01170	0.76	+0.4
1,232,653	+		MPMX20_01170	0.76	-0.8
1,232,653	+		MPMX20_01170	0.76	-0.3
1,232,653	+		MPMX20_01170	0.76	+0.1
1,232,653	+		MPMX20_01170	0.76	-2.6
1,232,653	+		MPMX20_01170	0.76	-3.4
1,232,653	+		MPMX20_01170	0.76	-1.3
1,232,653	+		MPMX20_01170	0.76	-1.3
1,232,653	+		MPMX20_01170	0.76	-1.3
1,232,653	+		MPMX20_01170	0.76	-0.9
1,232,653	+		MPMX20_01170	0.76	-0.1
1,232,653	+		MPMX20_01170	0.76	-0.1
1,232,653	+		MPMX20_01170	0.76	-0.7
1,232,653	+		MPMX20_01170	0.76	-2.0
1,232,653	+		MPMX20_01170	0.76	-0.1
1,232,653	+		MPMX20_01170	0.76	+0.1
1,232,653	+		MPMX20_01170	0.76	-1.8
1,232,653	+		MPMX20_01170	0.76	-0.5
1,232,653	+		MPMX20_01170	0.76	-0.5
1,232,653	+		MPMX20_01170	0.76	-0.4
1,232,653	+		MPMX20_01170	0.76	-2.7
1,232,653	+		MPMX20_01170	0.76	-2.5
1,232,653	+		MPMX20_01170	0.76	-2.2
1,232,653	+		MPMX20_01170	0.76	-0.0
1,232,653	+		MPMX20_01170	0.76	-1.7
1,232,654	+		MPMX20_01170	0.76	+0.5
1,232,658	+		MPMX20_01170	0.77	+0.3
1,232,668	+		MPMX20_01170	0.79	-0.5
1,232,818	-				-2.0
1,232,818	-				-0.7
1,232,818	-				-2.1
1,232,818	-				-1.9
1,232,819	-				-0.3
1,232,819	-				-1.3
1,232,839	-				-0.3
1,232,847	-				-3.3
1,232,863	-				-0.3
1,232,863	-				-2.0
1,232,863	-				-1.3
1,232,863	-				-1.9
1,232,863	-				-2.7
1,232,863	-				-2.6
1,232,863	-				-3.2
1,232,863	-				-1.9
1,232,863	-				-1.0
1,232,863	-				-1.5
1,232,863	-				-1.8
1,232,863	-				-1.1
1,232,863	-				-1.1
1,232,863	-				+0.1
1,232,863	-				-1.3
1,232,863	-				-0.6
1,232,863	-				-0.1
1,232,863	-				-1.7
1,232,863	-				-0.5
1,232,863	-				-1.3
1,232,863	-				-2.7
1,232,863	-				-0.7
1,232,863	-				-2.7
1,232,863	-				+0.3
1,232,863	-				-0.9
1,232,863	-				-0.3
1,232,863	-				-1.7
1,232,863	-				-1.6
1,232,863	-				+0.3
1,232,863	-				-1.1
1,232,863	-				-0.8
1,232,872	+				-2.3
1,232,872	+				+0.9
1,232,872	+				-1.5
1,232,872	+				-0.8
1,232,874	-				-0.5
1,232,880	-				-2.0
1,232,880	-				-2.1
1,232,880	-				-2.1
1,232,880	-				-1.6
1,232,880	-				-3.0
1,232,880	-				-0.9
1,232,880	-				-0.9
1,232,880	-				-0.3
1,232,880	-				-1.1
1,232,880	-				-1.5
1,232,880	-				-0.7
1,232,880	-				-0.8
1,232,880	-				-2.5
1,232,880	-				-0.3
1,232,880	-				-2.2
1,232,880	-				+1.1
1,232,880	-				-1.1
1,232,880	-				-2.6
1,232,880	-				-2.7
1,232,900	-				-1.1
1,232,904	+				-1.1
1,232,909	+				-0.3
1,232,912	+				-1.3
1,232,918	+				-1.1
1,232,919	+				-1.1
1,232,919	+				-0.1
1,232,919	+				-0.1
1,232,923	+				-0.3
1,232,979	-				-1.5
1,232,985	+				-1.1
1,232,985	+				-2.9
1,232,985	+				-1.7
1,232,985	+				-1.4
1,232,993	-				-1.8
1,232,993	-				-2.1
1,232,993	-				-2.3
1,232,993	-				-1.9
1,232,993	-				-0.9
1,232,993	-				-2.2
1,232,993	-				-1.1
1,232,993	-				-2.3
1,232,993	-				-2.7
1,232,993	-				-1.3
1,232,993	-				-1.1
1,232,993	-				-2.8
1,232,993	-				-2.5
1,232,993	-				+0.1
1,232,993	-				+4.7
1,232,993	-				-2.6
1,232,993	-				-3.0
1,232,993	-				-1.7
1,232,993	-				-0.7
1,232,993	-				-1.5
1,232,993	-				-2.6
1,232,993	-				+0.8
1,232,993	-				-1.8
1,232,993	-				-1.8
1,233,000	-				-2.0
1,233,003	-				-1.5
1,233,003	-				-2.1
1,233,003	-				-1.1
1,233,003	-				-2.5
1,233,003	-				-1.7
1,233,003	-				+1.1
1,233,003	-				-0.5
1,233,003	-				-1.5
1,233,021	-		MPMX20_01171	0.11	-1.4
1,233,022	-		MPMX20_01171	0.11	-0.3
1,233,022	-		MPMX20_01171	0.11	-1.7
1,233,022	-		MPMX20_01171	0.11	-1.5
1,233,031	+		MPMX20_01171	0.13	+1.7
1,233,034	-		MPMX20_01171	0.13	-1.9
1,233,039	+		MPMX20_01171	0.13	-2.7
1,233,040	-		MPMX20_01171	0.14	-1.4
1,233,041	-		MPMX20_01171	0.14	-2.6
1,233,041	-		MPMX20_01171	0.14	-0.3
1,233,041	-		MPMX20_01171	0.14	-0.1
1,233,041	-		MPMX20_01171	0.14	-0.7
1,233,043	-		MPMX20_01171	0.14	-0.5
1,233,049	+		MPMX20_01171	0.15	-0.7
1,233,054	+		MPMX20_01171	0.15	-2.4
1,233,057	+		MPMX20_01171	0.15	-1.3
1,233,057	+		MPMX20_01171	0.15	-2.1
1,233,057	+		MPMX20_01171	0.15	-1.1
1,233,057	+		MPMX20_01171	0.15	-1.8
1,233,057	+		MPMX20_01171	0.15	-1.1
1,233,057	-		MPMX20_01171	0.15	-2.8
1,233,059	+		MPMX20_01171	0.16	-0.7
1,233,059	+		MPMX20_01171	0.16	-1.8
1,233,059	+		MPMX20_01171	0.16	-0.3
1,233,062	-		MPMX20_01171	0.16	-1.1
1,233,063	+		MPMX20_01171	0.16	-3.8
1,233,064	+		MPMX20_01171	0.16	-1.5
1,233,064	+		MPMX20_01171	0.16	-1.4
1,233,065	-		MPMX20_01171	0.16	-2.0
1,233,065	-		MPMX20_01171	0.16	+0.7
1,233,065	-		MPMX20_01171	0.16	-0.3
1,233,065	-		MPMX20_01171	0.16	-1.8
1,233,065	-		MPMX20_01171	0.16	-1.0
1,233,065	-		MPMX20_01171	0.16	-0.9
1,233,065	-		MPMX20_01171	0.16	-0.3
1,233,065	-		MPMX20_01171	0.16	-2.9
1,233,065	-		MPMX20_01171	0.16	-2.5
1,233,065	-		MPMX20_01171	0.16	-1.1
1,233,065	-		MPMX20_01171	0.16	-1.9
1,233,065	-		MPMX20_01171	0.16	-0.9
1,233,065	-		MPMX20_01171	0.16	-1.8
1,233,065	-		MPMX20_01171	0.16	-1.0
1,233,067	-		MPMX20_01171	0.17	+0.1
1,233,067	-		MPMX20_01171	0.17	-2.9
1,233,067	-		MPMX20_01171	0.17	-1.7
1,233,067	-		MPMX20_01171	0.17	-2.5
1,233,067	-		MPMX20_01171	0.17	-3.5
1,233,076	-		MPMX20_01171	0.18	+0.1
1,233,078	-		MPMX20_01171	0.18	+0.1
1,233,086	-		MPMX20_01171	0.19	-1.5
1,233,086	-		MPMX20_01171	0.19	-0.7
1,233,098	+		MPMX20_01171	0.20	-3.1
1,233,106	-		MPMX20_01171	0.21	-0.9
1,233,106	-		MPMX20_01171	0.21	+0.1
1,233,116	+		MPMX20_01171	0.22	+0.1
1,233,144	+		MPMX20_01171	0.25	-0.7
1,233,144	+		MPMX20_01171	0.25	-0.6
1,233,144	+		MPMX20_01171	0.25	-2.9
1,233,144	+		MPMX20_01171	0.25	-0.3
1,233,150	+		MPMX20_01171	0.26	-2.4
1,233,229	-		MPMX20_01171	0.35	-1.2
1,233,247	+		MPMX20_01171	0.37	-0.9
1,233,247	+		MPMX20_01171	0.37	-1.5
1,233,257	+		MPMX20_01171	0.38	-1.5
1,233,265	-		MPMX20_01171	0.39	-1.9
1,233,322	-		MPMX20_01171	0.46	-0.8
1,233,336	-		MPMX20_01171	0.47	+0.1
1,233,355	-		MPMX20_01171	0.49	-0.3
1,233,358	-		MPMX20_01171	0.50	-2.3
1,233,397	-		MPMX20_01171	0.54	-0.6
1,233,400	-		MPMX20_01171	0.54	-1.0
1,233,400	-		MPMX20_01171	0.54	-0.9
1,233,412	-		MPMX20_01171	0.56	-2.0
1,233,420	+		MPMX20_01171	0.57	-3.1
1,233,420	+		MPMX20_01171	0.57	-2.2
1,233,467	-		MPMX20_01171	0.62	-2.5
1,233,475	-		MPMX20_01171	0.63	-1.8
1,233,495	-		MPMX20_01171	0.65	-1.2
1,233,495	-		MPMX20_01171	0.65	-1.5
1,233,495	-		MPMX20_01171	0.65	-0.8
1,233,495	-		MPMX20_01171	0.65	-1.8
1,233,500	-		MPMX20_01171	0.66	-1.7
1,233,510	-		MPMX20_01171	0.67	-0.3
1,233,520	-		MPMX20_01171	0.68	-1.3
1,233,520	-		MPMX20_01171	0.68	-2.3
1,233,520	-		MPMX20_01171	0.68	-1.8
1,233,522	+		MPMX20_01171	0.68	-0.1
1,233,522	+		MPMX20_01171	0.68	-1.1
1,233,539	+		MPMX20_01171	0.70	-0.3
1,233,544	+		MPMX20_01171	0.71	-0.7
1,233,544	+		MPMX20_01171	0.71	-0.7
1,233,544	+		MPMX20_01171	0.71	-0.8
1,233,547	-		MPMX20_01171	0.71	-1.8
1,233,555	+		MPMX20_01171	0.72	-0.9
1,233,561	+		MPMX20_01171	0.73	-0.9
1,233,614	+		MPMX20_01171	0.79	-2.9
1,233,614	+		MPMX20_01171	0.79	-1.9
1,233,614	+		MPMX20_01171	0.79	+0.1
1,233,622	-		MPMX20_01171	0.80	-1.8
1,233,622	-		MPMX20_01171	0.80	-1.1
1,233,622	-		MPMX20_01171	0.80	+0.1
1,233,622	-		MPMX20_01171	0.80	-1.5
1,233,654	+		MPMX20_01171	0.83	-0.9
1,233,670	-		MPMX20_01171	0.85	-1.1
1,233,670	-		MPMX20_01171	0.85	-1.1
1,233,682	-		MPMX20_01171	0.87	-0.9
1,233,708	+		MPMX20_01171	0.90	+0.1
1,233,708	+		MPMX20_01171	0.90	-0.5
1,233,708	+		MPMX20_01171	0.90	-0.7
1,233,708	+		MPMX20_01171	0.90	-1.3
1,233,708	+		MPMX20_01171	0.90	-1.8
1,233,708	+		MPMX20_01171	0.90	-0.9
1,233,711	+		MPMX20_01171	0.90	-2.1
1,233,713	+				-3.7
1,233,713	+				-1.2
1,233,713	+				-0.9
1,233,713	+				-1.3
1,233,713	+				-4.0
1,233,713	+				-0.9
1,233,744	-				+0.1