Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01074

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4
1,130,770	-				-0.0
1,130,792	+				-1.5
1,130,810	-				-1.8
1,130,921	+		MPMX20_01073	0.35	-0.5
1,130,931	+		MPMX20_01073	0.38	-2.5
1,130,931	+		MPMX20_01073	0.38	-1.6
1,130,981	+		MPMX20_01073	0.53	-0.6
1,131,126	-				-2.5
1,131,151	-				+1.1
1,131,153	-				-2.0
1,131,198	+				-2.2
1,131,281	-		MPMX20_01074	0.24	-1.0
1,131,341	+		MPMX20_01074	0.33	-1.2
1,131,347	+		MPMX20_01074	0.34	-0.8
1,131,347	+		MPMX20_01074	0.34	-1.8
1,131,357	+		MPMX20_01074	0.36	-1.5
1,131,383	+		MPMX20_01074	0.40	-1.1
1,131,401	-		MPMX20_01074	0.43	-1.2
1,131,451	+		MPMX20_01074	0.52	-3.4
1,131,487	+		MPMX20_01074	0.58	-1.8
1,131,487	+		MPMX20_01074	0.58	-1.2
1,131,487	+		MPMX20_01074	0.58	-1.5
1,131,517	+		MPMX20_01074	0.63	-0.6
1,131,517	+		MPMX20_01074	0.63	-1.1
1,131,517	+		MPMX20_01074	0.63	-1.5
1,131,517	+		MPMX20_01074	0.63	-1.5
1,131,525	-		MPMX20_01074	0.64	-0.3
1,131,631	+		MPMX20_01074	0.81	-3.2
1,131,694	+				-1.7
1,131,704	+				-2.5
1,131,704	+				-1.8
1,131,853	+				-1.5
1,131,996	+				-0.5
1,132,006	+				+0.2
1,132,032	+				+1.8
1,132,040	-				-0.1
1,132,045	-		MPMX20_01075	0.10	-0.6
1,132,103	+		MPMX20_01075	0.13	-1.3
1,132,103	+		MPMX20_01075	0.13	-0.9
1,132,111	-		MPMX20_01075	0.14	-0.8
1,132,181	-		MPMX20_01075	0.17	-1.1
1,132,182	+		MPMX20_01075	0.17	+0.7
1,132,224	+		MPMX20_01075	0.20	-0.4
1,132,237	-		MPMX20_01075	0.20	+0.3
1,132,241	+		MPMX20_01075	0.21	+1.2
1,132,260	+		MPMX20_01075	0.22	-0.9
1,132,331	+		MPMX20_01075	0.25	+1.5
1,132,341	+		MPMX20_01075	0.26	+0.2
1,132,383	+		MPMX20_01075	0.28	+0.3
1,132,383	+		MPMX20_01075	0.28	-0.7
1,132,383	+		MPMX20_01075	0.28	-0.8
1,132,391	-		MPMX20_01075	0.29	+1.5
1,132,391	-		MPMX20_01075	0.29	+1.0
1,132,452	+		MPMX20_01075	0.32	+0.2
1,132,561	+		MPMX20_01075	0.38	-0.5
1,132,583	+		MPMX20_01075	0.39	+0.3
1,132,618	+		MPMX20_01075	0.41	-0.7
1,132,638	+		MPMX20_01075	0.42	+0.7
1,132,638	+		MPMX20_01075	0.42	+0.3
1,132,638	+		MPMX20_01075	0.42	+0.4
1,132,669	+		MPMX20_01075	0.43	+0.5
1,132,678	-		MPMX20_01075	0.44	+1.8
1,132,740	+		MPMX20_01075	0.47	+0.3
1,132,740	+		MPMX20_01075	0.47	+0.2
1,132,740	+		MPMX20_01075	0.47	-0.8