Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01014

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4
1,066,448	-				-0.7
1,066,500	+				-0.1
1,066,500	+				-0.4
1,066,500	+				+0.2
1,066,508	-				+1.0
1,066,508	-				+0.7
1,066,508	-				-0.9
1,066,508	-				-0.1
1,066,508	-				-0.3
1,066,520	+				-3.1
1,066,520	-				-0.2
1,066,537	+				+0.4
1,066,553	+				-0.6
1,066,553	+				-0.2
1,066,553	+				+0.6
1,066,554	-				-2.1
1,066,561	-				-1.9
1,066,561	-				-1.8
1,066,561	-				-0.5
1,066,561	-				+0.1
1,066,561	-				-1.1
1,066,561	-				-2.4
1,066,561	-				-1.2
1,066,561	-				-0.4
1,066,561	-				-1.3
1,066,563	+				-0.5
1,066,563	+				-0.8
1,066,563	+				-2.2
1,066,563	+				-1.5
1,066,571	+				-1.2
1,066,571	-				+0.3
1,066,571	-				+0.4
1,066,571	-				+0.1
1,066,571	-				-0.1
1,066,585	-				+1.2
1,066,587	+				-0.3
1,066,606	-				-1.6
1,066,628	+				+1.3
1,066,634	+				+0.1
1,066,636	-				-0.4
1,066,664	+				-1.3
1,066,709	+				-0.5
1,066,709	+				+0.2
1,066,709	+				-1.1
1,066,710	+				-0.0
1,066,710	+				-1.2
1,066,710	+				+1.7
1,066,710	+				-0.5
1,066,717	-				-0.6
1,066,717	-				-1.3
1,066,717	-				-1.5
1,066,717	-				-2.0
1,066,717	-				-0.3
1,066,717	-				-0.3
1,066,717	-				-0.4
1,066,781	+				-0.6
1,066,877	-				-1.2
1,066,885	+		MPMX20_01014	0.10	-1.3
1,066,885	+		MPMX20_01014	0.10	-2.2
1,066,885	+		MPMX20_01014	0.10	-0.1
1,066,885	+		MPMX20_01014	0.10	-0.9
1,066,885	+		MPMX20_01014	0.10	-1.1
1,066,885	+		MPMX20_01014	0.10	-1.5
1,066,885	+		MPMX20_01014	0.10	-0.2
1,066,893	-		MPMX20_01014	0.11	-1.7
1,066,893	-		MPMX20_01014	0.11	-1.3
1,066,893	-		MPMX20_01014	0.11	-1.3
1,066,893	-		MPMX20_01014	0.11	-1.5
1,066,893	-		MPMX20_01014	0.11	-1.0
1,066,893	-		MPMX20_01014	0.11	-0.6
1,066,893	-		MPMX20_01014	0.11	-0.3
1,066,893	-		MPMX20_01014	0.11	-2.9
1,066,893	-		MPMX20_01014	0.11	-1.3
1,066,893	-		MPMX20_01014	0.11	-0.8
1,066,942	+		MPMX20_01014	0.14	-0.7
1,066,942	+		MPMX20_01014	0.14	-1.8
1,066,942	+		MPMX20_01014	0.14	-0.3
1,066,950	-		MPMX20_01014	0.14	-0.9
1,066,950	-		MPMX20_01014	0.14	-1.0
1,066,950	-		MPMX20_01014	0.14	-2.0
1,066,950	-		MPMX20_01014	0.14	-1.4
1,066,986	+		MPMX20_01014	0.17	-1.9
1,066,986	+		MPMX20_01014	0.17	-0.9
1,066,994	-		MPMX20_01014	0.18	-1.5
1,066,994	-		MPMX20_01014	0.18	-1.9
1,067,032	+		MPMX20_01014	0.20	-1.4
1,067,035	-		MPMX20_01014	0.20	-2.8
1,067,064	-		MPMX20_01014	0.22	-0.9
1,067,093	+		MPMX20_01014	0.24	-1.1
1,067,101	+		MPMX20_01014	0.25	+0.0
1,067,101	-		MPMX20_01014	0.25	-0.3
1,067,114	+		MPMX20_01014	0.26	-1.3
1,067,114	+		MPMX20_01014	0.26	-2.2
1,067,129	-		MPMX20_01014	0.27	-0.5
1,067,131	+		MPMX20_01014	0.27	-1.3
1,067,173	+		MPMX20_01014	0.30	-0.9
1,067,173	+		MPMX20_01014	0.30	+0.2
1,067,320	+		MPMX20_01014	0.40	-2.5
1,067,331	-		MPMX20_01014	0.41	-1.3
1,067,360	-		MPMX20_01014	0.43	-0.9
1,067,380	-		MPMX20_01014	0.44	+1.7
1,067,426	-		MPMX20_01014	0.47	-0.3
1,067,534	-		MPMX20_01014	0.55	+1.0
1,067,570	+		MPMX20_01014	0.57	-0.8
1,067,570	+		MPMX20_01014	0.57	-1.7
1,067,578	-		MPMX20_01014	0.58	-0.9
1,067,604	+		MPMX20_01014	0.60	-2.5
1,067,610	+		MPMX20_01014	0.60	-1.0
1,067,623	+		MPMX20_01014	0.61	-1.4
1,068,073	+				+0.7
1,068,081	-				-1.2
1,068,106	-				-0.5
1,068,117	+				-1.8
1,068,117	+				-1.0
1,068,117	+				-1.5
1,068,150	+				-3.2
1,068,181	-				-0.9
1,068,239	-				+2.4
1,068,454	+		MPMX20_01015	0.37	-0.5
1,068,533	-		MPMX20_01015	0.50	+0.6
1,068,614	+		MPMX20_01015	0.64	-0.5
1,068,677	-		MPMX20_01015	0.75	-0.3
1,068,783	-				+0.8
1,068,810	-				+0.2
1,068,820	-				+0.3
1,068,833	-				+0.0
1,068,837	+				+0.4
1,068,837	+				-0.7
1,068,850	-				+2.7
1,068,922	+		MPMX20_01016	0.14	-1.3
1,069,018	+		MPMX20_01016	0.25	-0.1
1,069,074	-		MPMX20_01016	0.31	+0.1