Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_021700

Experiment: PM with argon and butyrate 10 mM and Sodium bicarbonate 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PM with argon and butyrate 10 mM and Sodium bicarbonate 10 mM
4,728,604	-		TX73_021695	0.69	-0.6
4,728,625	-		TX73_021695	0.70	-0.5
4,728,628	+		TX73_021695	0.70	+0.8
4,728,628	+		TX73_021695	0.70	+0.8
4,728,628	+		TX73_021695	0.70	+0.1
4,728,631	-		TX73_021695	0.70	-0.2
4,728,636	-		TX73_021695	0.70	-0.5
4,728,646	-		TX73_021695	0.71	-0.8
4,728,646	-		TX73_021695	0.71	+0.3
4,728,688	+		TX73_021695	0.73	+0.9
4,728,690	+		TX73_021695	0.73	-0.1
4,728,690	+		TX73_021695	0.73	+1.0
4,728,690	+		TX73_021695	0.73	+0.0
4,728,690	+		TX73_021695	0.73	+0.7
4,728,690	+		TX73_021695	0.73	-0.1
4,728,696	-		TX73_021695	0.74	+0.3
4,728,696	-		TX73_021695	0.74	-0.4
4,728,732	+		TX73_021695	0.75	+0.5
4,728,793	-		TX73_021695	0.79	-0.4
4,728,830	-		TX73_021695	0.81	+0.6
4,728,830	-		TX73_021695	0.81	-0.8
4,728,833	+		TX73_021695	0.81	+0.1
4,728,835	-		TX73_021695	0.81	+0.8
4,728,838	+		TX73_021695	0.81	+0.9
4,728,876	+		TX73_021695	0.83	-0.3
4,728,876	+		TX73_021695	0.83	+1.0
4,728,902	+		TX73_021695	0.84	+0.9
4,728,922	-		TX73_021695	0.85	+0.6
4,728,924	+		TX73_021695	0.85	-0.6
4,728,984	+		TX73_021695	0.89	+1.5
4,729,009	-		TX73_021695	0.90	-0.6
4,729,023	+				+0.4
4,729,031	-				-0.9
4,729,077	-				+0.5
4,729,082	-				+0.3
4,729,093	+				-0.5
4,729,093	+				+1.0
4,729,118	+				-0.1
4,729,118	+				+0.5
4,729,126	-				-1.1
4,729,131	-				-0.0
4,729,133	+				+0.7
4,729,133	+				+0.9
4,729,133	+				-0.0
4,729,133	+				-0.8
4,729,133	+				+0.3
4,729,135	+				+0.2
4,729,141	-				-1.2
4,729,141	-				+0.1
4,729,141	-				-0.2
4,729,141	-				+0.2
4,729,146	-				+0.1
4,729,155	+				-0.1
4,729,156	-				-0.4
4,729,192	+				+0.5
4,729,236	-				-0.2
4,729,246	+				-0.3
4,729,275	-				+1.6
4,729,287	-				-0.6
4,729,287	-				-0.1
4,729,307	-				-0.1
4,729,307	-				-0.6
4,729,307	-				+0.3
4,729,313	+				+0.3
4,729,318	+				-0.9
4,729,331	-				+0.8
4,729,342	-				-0.0
4,729,346	-				+0.2
4,729,356	+				-0.6
4,729,356	+				-0.9
4,729,356	+				-1.9
4,729,366	-				-0.1
4,729,368	+				-1.0
4,729,420	-				-0.3
4,729,429	+				+0.1
4,729,429	+				-0.1
4,729,429	+				+0.7
4,729,429	+				-0.1
4,729,429	+				+0.1
4,729,437	-				+1.0
4,729,437	-				-0.6
4,729,437	-				-0.6
4,729,437	-				-0.1
4,729,447	-				+0.4
4,729,451	+				+1.1
4,729,454	-				-0.2
4,729,471	+				+0.0
4,729,471	+				+0.6
4,729,471	+				+0.8
4,729,471	+				+0.0
4,729,471	+				-0.6
4,729,471	+				-0.6
4,729,471	+				+0.4
4,729,471	+				-0.8
4,729,471	+				+0.2
4,729,471	+				+0.0
4,729,471	+				+0.4
4,729,471	+				-0.8
4,729,471	+				-0.0
4,729,471	+				-1.2
4,729,471	+				+0.1
4,729,471	+				+1.0
4,729,471	+				+0.2
4,729,479	-				-0.4
4,729,479	-				-1.5
4,729,479	-				+0.6
4,729,479	-				-0.8
4,729,479	-				-0.2
4,729,479	-				+0.6
4,729,479	-				-0.5
4,729,479	-				+0.1
4,729,479	-				+0.5
4,729,479	-				-0.2
4,729,479	-				+1.5
4,729,479	-				-0.7
4,729,479	-				-0.1
4,729,479	-				+0.0
4,729,479	-				+0.7
4,729,479	-				+0.2
4,729,479	-				+0.3
4,729,479	-				+0.3
4,729,479	-				-0.0
4,729,498	+				-0.1
4,729,498	+				+0.1
4,729,498	+				+0.3
4,729,498	+				-0.4
4,729,498	+				+0.1
4,729,498	+				+0.5
4,729,506	-				-0.0
4,729,506	-				-0.4
4,729,506	-				+0.1
4,729,506	-				-0.1
4,729,506	-				-0.5
4,729,512	-				+0.4
4,729,530	+				+1.0
4,729,559	-				-1.0
4,729,561	-				-1.1
4,729,595	+				+0.1
4,729,601	-				-0.9
4,729,603	-				+0.5
4,729,615	+				+0.1
4,729,622	+				+0.4
4,729,629	-				-1.4
4,729,635	+		TX73_021700	0.11	-0.6
4,729,672	-		TX73_021700	0.16	-0.2
4,729,675	+		TX73_021700	0.17	-0.6
4,729,683	-		TX73_021700	0.18	+0.3
4,729,698	-		TX73_021700	0.20	+0.3
4,729,700	-		TX73_021700	0.21	+0.7
4,729,700	-		TX73_021700	0.21	-0.2
4,729,705	+		TX73_021700	0.22	-1.1
4,729,710	+		TX73_021700	0.22	-0.2
4,729,710	+		TX73_021700	0.22	-0.4
4,729,710	+		TX73_021700	0.22	+0.9
4,729,713	-		TX73_021700	0.23	-0.0
4,729,713	-		TX73_021700	0.23	+0.2
4,729,718	-		TX73_021700	0.24	+1.0
4,729,745	-		TX73_021700	0.28	-0.4
4,729,754	+		TX73_021700	0.29	+0.2
4,729,754	+		TX73_021700	0.29	-0.2
4,729,759	+		TX73_021700	0.30	-0.0
4,729,762	+		TX73_021700	0.31	+0.4
4,729,762	-		TX73_021700	0.31	+0.4
4,729,762	-		TX73_021700	0.31	-0.1
4,729,764	+		TX73_021700	0.31	-1.1
4,729,769	+		TX73_021700	0.32	+1.4
4,729,788	+		TX73_021700	0.35	-0.0
4,729,789	-		TX73_021700	0.35	+0.3
4,729,822	+		TX73_021700	0.40	+1.2
4,729,889	+		TX73_021700	0.50	+0.1
4,729,897	-		TX73_021700	0.52	+0.3
4,729,916	-		TX73_021700	0.55	+0.6
4,729,918	+		TX73_021700	0.55	-0.1
4,729,918	+		TX73_021700	0.55	-0.5
4,729,919	+		TX73_021700	0.55	-0.0
4,729,924	+		TX73_021700	0.56	-0.2
4,729,926	-		TX73_021700	0.56	-0.5
4,729,926	-		TX73_021700	0.56	+0.3
4,729,927	-		TX73_021700	0.56	-0.4
4,729,948	-		TX73_021700	0.60	-0.3
4,729,948	-		TX73_021700	0.60	+0.2
4,729,973	-		TX73_021700	0.64	+0.6
4,729,984	+		TX73_021700	0.65	+1.6
4,729,990	+		TX73_021700	0.66	-0.4
4,729,999	-		TX73_021700	0.68	-0.2
4,730,050	-		TX73_021700	0.76	-0.2
4,730,059	+		TX73_021700	0.77	+0.6
4,730,067	-		TX73_021700	0.78	-3.3
4,730,067	-		TX73_021700	0.78	-1.4
4,730,090	-		TX73_021700	0.82	-0.5
4,730,112	-		TX73_021700	0.86	+0.9
4,730,126	-		TX73_021700	0.88	+0.1
4,730,163	+				+0.6
4,730,174	+				+1.8
4,730,182	-				+0.1
4,730,274	+				+0.1
4,730,282	-				+0.7
4,730,282	-				-1.4
4,730,282	-				-0.9
4,730,282	-				-0.5
4,730,302	-				+0.7
4,730,303	-				-0.1
4,730,316	-				+0.4
4,730,330	+				-0.3
4,730,330	+				+1.2
4,730,330	+				+1.2
4,730,335	+				-0.3
4,730,338	-				-0.5
4,730,338	-				+1.2
4,730,350	+				-0.4
4,730,358	-				-1.4
4,730,358	-				+0.2
4,730,370	-				+0.1
4,730,383	-				+1.2
4,730,386	+				+1.1
4,730,418	+				-0.3
4,730,426	-				+0.6
4,730,455	+		TX73_021705	0.10	-0.1
4,730,458	-		TX73_021705	0.11	+0.5
4,730,466	-		TX73_021705	0.11	-1.3
4,730,477	-		TX73_021705	0.12	-1.6
4,730,530	-		TX73_021705	0.16	-2.0
4,730,619	+		TX73_021705	0.22	-0.1
4,730,627	-		TX73_021705	0.22	-1.8
4,730,646	-		TX73_021705	0.23	-0.5
4,730,667	-		TX73_021705	0.25	-0.8
4,730,764	+		TX73_021705	0.31	+0.8
4,730,769	+		TX73_021705	0.32	+2.5
4,730,782	-		TX73_021705	0.32	+0.6
4,730,784	-		TX73_021705	0.33	+1.2
4,730,784	-		TX73_021705	0.33	-1.1
4,730,850	-		TX73_021705	0.37	-0.4
4,730,872	-		TX73_021705	0.39	+1.2
4,730,879	+		TX73_021705	0.39	+0.8
4,730,889	+		TX73_021705	0.40	+1.8
4,730,904	-		TX73_021705	0.41	+1.8
4,730,904	-		TX73_021705	0.41	+1.5
4,730,956	-		TX73_021705	0.44	+1.2
4,730,962	+		TX73_021705	0.45	+0.9
4,731,036	+		TX73_021705	0.50	+1.0
4,731,063	+		TX73_021705	0.51	+0.0
4,731,067	+		TX73_021705	0.52	+0.6
4,731,071	-		TX73_021705	0.52	+0.6
4,731,071	-		TX73_021705	0.52	-0.8
4,731,082	+		TX73_021705	0.53	+2.2
4,731,090	-		TX73_021705	0.53	-0.0
4,731,090	-		TX73_021705	0.53	+2.0
4,731,104	-		TX73_021705	0.54	+1.2
4,731,124	+		TX73_021705	0.55	+0.6
4,731,131	-		TX73_021705	0.56	+0.6
4,731,152	-		TX73_021705	0.57	+0.6
4,731,155	+		TX73_021705	0.58	+2.2
4,731,185	-		TX73_021705	0.60	+0.2
4,731,185	-		TX73_021705	0.60	-1.6