Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_014775

Experiment: MDC_bicarb with butyrate and Adenine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MDC_bicarb with butyrate and Adenine
3,226,230	-				-1.8
3,226,230	-				-0.6
3,226,230	-				+1.3
3,226,241	+				-1.6
3,226,251	+				+0.1
3,226,270	-		TX73_014770	0.11	+0.6
3,226,274	+		TX73_014770	0.12	-0.4
3,226,274	+		TX73_014770	0.12	+1.8
3,226,282	+		TX73_014770	0.12	-2.6
3,226,282	-		TX73_014770	0.12	+0.8
3,226,283	-		TX73_014770	0.13	+0.7
3,226,290	+		TX73_014770	0.13	-1.3
3,226,290	-		TX73_014770	0.13	-0.3
3,226,300	+		TX73_014770	0.14	+1.8
3,226,304	-		TX73_014770	0.15	-0.2
3,226,306	+		TX73_014770	0.15	+0.7
3,226,309	-		TX73_014770	0.15	+0.6
3,226,329	+		TX73_014770	0.17	-2.1
3,226,347	-		TX73_014770	0.19	+0.9
3,226,356	+		TX73_014770	0.20	+0.6
3,226,397	-		TX73_014770	0.24	+0.7
3,226,414	-		TX73_014770	0.25	+1.3
3,226,434	+		TX73_014770	0.27	-0.5
3,226,442	-		TX73_014770	0.28	+0.4
3,226,459	-		TX73_014770	0.30	-0.0
3,226,519	+		TX73_014770	0.36	+0.2
3,226,525	+		TX73_014770	0.36	+1.7
3,226,533	-		TX73_014770	0.37	-0.4
3,226,544	+		TX73_014770	0.38	+3.1
3,226,544	+		TX73_014770	0.38	-2.0
3,226,552	-		TX73_014770	0.39	+0.7
3,226,552	-		TX73_014770	0.39	+0.9
3,226,552	-		TX73_014770	0.39	+0.6
3,226,558	-		TX73_014770	0.39	+0.6
3,226,569	-		TX73_014770	0.40	+1.4
3,226,594	-		TX73_014770	0.43	-0.0
3,226,613	-		TX73_014770	0.45	+0.8
3,226,616	+		TX73_014770	0.45	-0.8
3,226,622	-		TX73_014770	0.46	+0.5
3,226,625	-		TX73_014770	0.46	-0.6
3,226,635	-		TX73_014770	0.47	-1.2
3,226,639	-		TX73_014770	0.47	-2.3
3,226,649	+		TX73_014770	0.48	+0.4
3,226,654	+		TX73_014770	0.49	-0.5
3,226,659	+		TX73_014770	0.49	+0.2
3,226,662	-		TX73_014770	0.50	-0.2
3,226,664	+		TX73_014770	0.50	+2.2
3,226,665	+		TX73_014770	0.50	-0.5
3,226,665	+		TX73_014770	0.50	+0.6
3,226,668	-		TX73_014770	0.50	+0.0
3,226,673	-		TX73_014770	0.51	-4.0
3,226,679	-		TX73_014770	0.51	+1.4
3,226,688	+		TX73_014770	0.52	+0.6
3,226,688	+		TX73_014770	0.52	+0.4
3,226,688	+		TX73_014770	0.52	+1.2
3,226,694	+		TX73_014770	0.53	-0.4
3,226,696	-		TX73_014770	0.53	-2.7
3,226,696	-		TX73_014770	0.53	-0.7
3,226,696	-		TX73_014770	0.53	-4.1
3,226,696	-		TX73_014770	0.53	+1.2
3,226,696	-		TX73_014770	0.53	+0.6
3,226,711	-		TX73_014770	0.54	+0.7
3,226,735	+		TX73_014770	0.57	-0.0
3,226,735	+		TX73_014770	0.57	+0.8
3,226,736	-		TX73_014770	0.57	-0.3
3,226,768	-		TX73_014770	0.60	+1.1
3,226,773	+		TX73_014770	0.60	-0.5
3,226,782	+		TX73_014770	0.61	-0.7
3,226,807	-		TX73_014770	0.64	+0.7
3,226,814	+		TX73_014770	0.64	+0.9
3,226,814	+		TX73_014770	0.64	-0.8
3,226,821	+		TX73_014770	0.65	+1.8
3,226,834	+		TX73_014770	0.66	-1.0
3,226,834	+		TX73_014770	0.66	-0.4
3,226,834	+		TX73_014770	0.66	-0.5
3,226,834	+		TX73_014770	0.66	+0.8
3,226,834	+		TX73_014770	0.66	+1.0
3,226,834	-		TX73_014770	0.66	+0.2
3,226,842	-		TX73_014770	0.67	-0.3
3,226,855	+		TX73_014770	0.68	+1.5
3,226,860	+		TX73_014770	0.69	+1.1
3,226,883	-		TX73_014770	0.71	+0.8
3,226,899	+		TX73_014770	0.73	-1.3
3,226,899	+		TX73_014770	0.73	-0.7
3,226,901	+		TX73_014770	0.73	+0.9
3,226,901	+		TX73_014770	0.73	+0.6
3,226,907	-		TX73_014770	0.73	-0.1
3,226,909	+		TX73_014770	0.74	+1.0
3,226,911	+		TX73_014770	0.74	-0.1
3,226,911	+		TX73_014770	0.74	+1.6
3,226,911	+		TX73_014770	0.74	-0.3
3,226,917	-		TX73_014770	0.74	+0.9
3,226,919	-		TX73_014770	0.75	+0.4
3,226,919	-		TX73_014770	0.75	+0.8
3,226,931	+		TX73_014770	0.76	+1.6
3,226,944	-		TX73_014770	0.77	+0.9
3,226,949	-		TX73_014770	0.77	+0.1
3,226,949	-		TX73_014770	0.77	-0.1
3,226,953	+		TX73_014770	0.78	+0.7
3,226,969	-		TX73_014770	0.79	+1.0
3,226,979	-		TX73_014770	0.80	+1.0
3,226,989	+		TX73_014770	0.81	-0.6
3,226,989	+		TX73_014770	0.81	+1.2
3,226,989	-		TX73_014770	0.81	+0.1
3,226,993	+		TX73_014770	0.82	+0.3
3,226,996	-		TX73_014770	0.82	+0.4
3,227,039	-		TX73_014770	0.86	+0.3
3,227,048	+		TX73_014770	0.87	+1.7
3,227,056	-		TX73_014770	0.88	-0.1
3,227,066	-		TX73_014770	0.89	+1.2
3,227,081	-				+0.4
3,227,125	+				-1.4
3,227,133	-				+0.8
3,227,137	+				-0.6
3,227,137	+				-0.2
3,227,137	+				+1.0
3,227,137	+				+1.0
3,227,145	-				+0.3
3,227,145	-				-2.1
3,227,145	-				-0.2
3,227,145	-				-0.1
3,227,145	-				+1.4
3,227,149	+				+1.6
3,227,173	+				+0.7
3,227,178	+				+0.0
3,227,181	-				+0.4
3,227,181	-				-0.1
3,227,181	-				-0.5
3,227,201	-				+0.2
3,227,201	-				-0.5
3,227,204	+				+0.8
3,227,204	+				+0.7
3,227,212	-				+0.3
3,227,212	-				+1.1
3,227,212	-				+0.7
3,227,220	-				-0.4
3,227,247	-				+0.8
3,227,247	-				+0.4
3,227,270	-				+0.7
3,227,282	+				+0.6
3,227,282	-				-0.0
3,227,282	-				+0.6
3,227,283	+				+0.4
3,227,304	-				+0.8
3,227,335	-				-2.4
3,227,335	-				+2.3
3,227,357	-				-0.8
3,227,358	-				+0.5
3,227,379	+				-2.6
3,227,391	+		TX73_014775	0.10	+0.9
3,227,399	-		TX73_014775	0.11	-0.7
3,227,433	-		TX73_014775	0.13	-0.7
3,227,447	-		TX73_014775	0.13	+1.7
3,227,466	-		TX73_014775	0.15	+1.2
3,227,480	+		TX73_014775	0.16	-2.2
3,227,483	+		TX73_014775	0.16	-1.1
3,227,499	-		TX73_014775	0.17	-1.9
3,227,503	+		TX73_014775	0.17	-1.5
3,227,505	+		TX73_014775	0.17	+1.1
3,227,530	+		TX73_014775	0.19	-1.8
3,227,534	-		TX73_014775	0.19	+2.2
3,227,606	+		TX73_014775	0.23	+1.4
3,227,606	+		TX73_014775	0.23	+0.8
3,227,667	+		TX73_014775	0.27	+0.4
3,227,672	+		TX73_014775	0.27	-0.9
3,227,677	+		TX73_014775	0.28	+1.7
3,227,677	+		TX73_014775	0.28	-0.9
3,227,680	-		TX73_014775	0.28	-2.2
3,227,680	-		TX73_014775	0.28	-1.3
3,227,686	-		TX73_014775	0.28	+3.1
3,227,733	+		TX73_014775	0.31	+2.1
3,227,733	+		TX73_014775	0.31	-0.0
3,227,741	-		TX73_014775	0.32	+0.7
3,227,748	+		TX73_014775	0.32	-0.7
3,227,822	-		TX73_014775	0.37	+0.5
3,227,832	-		TX73_014775	0.37	-0.4
3,227,844	-		TX73_014775	0.38	+0.5
3,228,110	-		TX73_014775	0.54	+1.7
3,228,110	-		TX73_014775	0.54	+0.2
3,228,135	+		TX73_014775	0.56	+0.5
3,228,143	-		TX73_014775	0.56	+0.8
3,228,204	+		TX73_014775	0.60	+0.9
3,228,212	-		TX73_014775	0.61	-1.5
3,228,212	-		TX73_014775	0.61	+0.9
3,228,212	-		TX73_014775	0.61	-0.3
3,228,212	-		TX73_014775	0.61	+0.9
3,228,287	-		TX73_014775	0.65	+0.4
3,228,315	+		TX73_014775	0.67	-1.7
3,228,315	+		TX73_014775	0.67	+0.5
3,228,315	+		TX73_014775	0.67	+1.0
3,228,357	+		TX73_014775	0.70	-1.5
3,228,365	-		TX73_014775	0.70	-0.3
3,228,403	-		TX73_014775	0.72	+0.1
3,228,403	-		TX73_014775	0.72	+1.8
3,228,449	-		TX73_014775	0.75	+1.7
3,228,488	-		TX73_014775	0.78	+0.2
3,228,535	-		TX73_014775	0.81	-2.1
3,228,567	+		TX73_014775	0.83	-0.3
3,228,575	-		TX73_014775	0.83	+0.9
3,228,575	-		TX73_014775	0.83	-0.8
3,228,575	-		TX73_014775	0.83	-0.2
3,228,575	-		TX73_014775	0.83	+1.2
3,228,578	-		TX73_014775	0.83	-0.4
3,228,585	-		TX73_014775	0.84	+0.6
3,228,590	-		TX73_014775	0.84	-1.7
3,228,623	-		TX73_014775	0.86	+1.1
3,228,623	-		TX73_014775	0.86	+0.8
3,228,629	-		TX73_014775	0.86	-0.8
3,228,645	+		TX73_014775	0.87	+0.8
3,228,673	-		TX73_014775	0.89	+1.1
3,228,698	-				+0.8
3,228,706	-				-0.7
3,228,838	-				-0.0
3,228,850	+				+0.7
3,228,850	+				-0.3
3,228,888	-				+2.1
3,228,913	+				-0.2
3,228,913	+				+0.8
3,228,913	+				-0.7
3,228,913	+				+0.6
3,228,921	-				-0.1
3,228,921	-				-0.8