Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_024565

Experiment: MDC_bicarb with butyrate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MDC_bicarb with butyrate
5,335,334	-				+0.8
5,335,362	+				-0.1
5,335,421	+				+0.6
5,335,540	-				-0.4
5,335,556	+				-0.8
5,335,574	-				+0.0
5,335,574	-				+0.3
5,335,579	+				-0.1
5,335,581	+				+0.2
5,335,582	-				-0.6
5,335,595	+				-0.8
5,335,624	-				-0.3
5,335,641	+				-0.2
5,335,647	-		TX73_024560	0.11	-0.7
5,335,712	+		TX73_024560	0.26	-1.6
5,335,720	-		TX73_024560	0.28	+0.2
5,335,727	+		TX73_024560	0.30	+0.8
5,335,735	-		TX73_024560	0.31	-1.8
5,335,744	+		TX73_024560	0.34	-1.5
5,335,766	+		TX73_024560	0.39	-0.6
5,335,766	+		TX73_024560	0.39	+0.0
5,335,768	+		TX73_024560	0.39	+0.2
5,335,774	-		TX73_024560	0.41	+1.7
5,335,774	-		TX73_024560	0.41	-0.3
5,335,774	-		TX73_024560	0.41	-1.0
5,335,774	-		TX73_024560	0.41	+0.3
5,335,781	-		TX73_024560	0.42	-0.3
5,335,784	-		TX73_024560	0.43	-0.6
5,335,791	-		TX73_024560	0.44	-0.1
5,335,808	+		TX73_024560	0.48	+0.8
5,335,811	-		TX73_024560	0.49	-0.7
5,335,822	+		TX73_024560	0.52	+0.2
5,335,865	+		TX73_024560	0.62	-2.2
5,335,873	+		TX73_024560	0.63	-0.2
5,335,879	+		TX73_024560	0.65	-0.1
5,335,879	+		TX73_024560	0.65	+0.2
5,335,880	-		TX73_024560	0.65	-0.3
5,335,896	-		TX73_024560	0.69	-1.0
5,335,898	-		TX73_024560	0.69	+0.3
5,335,900	+		TX73_024560	0.70	+0.0
5,335,930	-		TX73_024560	0.77	+0.3
5,335,936	-		TX73_024560	0.78	-0.4
5,335,940	+		TX73_024560	0.79	+0.1
5,335,951	+		TX73_024560	0.81	+0.8
5,335,975	-		TX73_024560	0.87	-0.4
5,335,995	+				-1.2
5,336,009	+				-1.4
5,336,037	+				+0.6
5,336,055	-				+1.0
5,336,058	+				+0.1
5,336,060	+				+0.7
5,336,060	+				+0.2
5,336,060	+				+0.1
5,336,060	+				-0.2
5,336,068	-				+0.6
5,336,068	-				-0.7
5,336,068	-				+0.1
5,336,096	+				-0.5
5,336,104	-				+0.0
5,336,154	+				-0.7
5,336,159	+				-1.9
5,336,159	+				+0.6
5,336,178	-				+0.2
5,336,179	-				+0.2
5,336,183	-				-0.0
5,336,257	-				+0.1
5,336,278	-				-0.3
5,336,280	+				+0.3
5,336,316	+				+0.0
5,336,324	-				-0.4
5,336,329	-				+0.2
5,336,329	-				-2.6
5,336,349	+				+0.2
5,336,355	-				+0.7
5,336,392	+				-1.2
5,336,394	+				-0.8
5,336,399	-				-2.1
5,336,410	-				+0.8
5,336,417	+				+1.2
5,336,417	+				-2.0
5,336,417	+				+0.5
5,336,425	-				-1.4
5,336,425	-				-1.5
5,336,425	-				-0.6
5,336,491	+				-0.3
5,336,492	+				-0.6
5,336,499	+				-0.1
5,336,499	+				-0.5
5,336,499	+				-0.5
5,336,499	-				-2.1
5,336,506	+				-2.4
5,336,507	-				-0.5
5,336,514	-				-0.1
5,336,514	-				-0.9
5,336,526	+				-1.0
5,336,532	-				-2.2
5,336,536	+				-2.7
5,336,536	+				-1.6
5,336,543	+				-3.3
5,336,575	-		TX73_024565	0.10	-0.6
5,336,591	-		TX73_024565	0.11	-0.6
5,336,592	-		TX73_024565	0.11	-1.6
5,336,593	-		TX73_024565	0.11	+0.8
5,336,618	+		TX73_024565	0.12	-2.3
5,336,641	+		TX73_024565	0.13	+0.2
5,336,647	-		TX73_024565	0.13	-1.0
5,336,649	-		TX73_024565	0.13	-0.9
5,336,649	-		TX73_024565	0.13	-1.5
5,336,660	+		TX73_024565	0.14	-0.6
5,336,660	+		TX73_024565	0.14	-2.8
5,336,660	+		TX73_024565	0.14	-1.7
5,336,660	+		TX73_024565	0.14	-1.6
5,336,668	-		TX73_024565	0.14	-0.1
5,336,670	+		TX73_024565	0.14	+1.8
5,336,688	-		TX73_024565	0.15	-0.5
5,336,722	+		TX73_024565	0.16	-0.2
5,336,732	+		TX73_024565	0.16	-1.5
5,336,735	-		TX73_024565	0.17	+0.5
5,336,738	-		TX73_024565	0.17	-1.4
5,336,742	+		TX73_024565	0.17	-1.2
5,336,764	+		TX73_024565	0.18	-2.1
5,336,764	+		TX73_024565	0.18	-0.3
5,336,772	-		TX73_024565	0.18	-2.0
5,336,772	-		TX73_024565	0.18	-0.1
5,336,782	-		TX73_024565	0.18	-1.5
5,336,801	-		TX73_024565	0.19	-2.6
5,336,826	-		TX73_024565	0.20	-3.7
5,336,832	-		TX73_024565	0.20	-1.0
5,336,832	-		TX73_024565	0.20	-0.1
5,336,934	-		TX73_024565	0.24	-0.2
5,336,944	-		TX73_024565	0.25	-1.4
5,336,944	-		TX73_024565	0.25	+0.4
5,336,970	-		TX73_024565	0.26	-0.1
5,336,972	+		TX73_024565	0.26	-1.1
5,336,978	+		TX73_024565	0.26	-2.1
5,336,978	+		TX73_024565	0.26	+1.7
5,336,979	+		TX73_024565	0.26	-0.6
5,336,979	+		TX73_024565	0.26	-0.0
5,336,979	+		TX73_024565	0.26	-2.3
5,336,987	-		TX73_024565	0.26	-1.0
5,336,987	-		TX73_024565	0.26	-1.4
5,336,987	-		TX73_024565	0.26	-1.8
5,336,987	-		TX73_024565	0.26	-1.5
5,336,987	-		TX73_024565	0.26	-1.1
5,336,996	+		TX73_024565	0.27	-0.9
5,337,001	+		TX73_024565	0.27	-2.9
5,337,005	+		TX73_024565	0.27	-1.3
5,337,013	-		TX73_024565	0.27	+0.2
5,337,027	+		TX73_024565	0.28	-1.5
5,337,065	+		TX73_024565	0.30	-2.1
5,337,073	-		TX73_024565	0.30	-0.9
5,337,075	-		TX73_024565	0.30	-0.6
5,337,080	+		TX73_024565	0.30	-0.7
5,337,080	+		TX73_024565	0.30	-1.4
5,337,122	+		TX73_024565	0.32	-0.7
5,337,122	+		TX73_024565	0.32	+0.3
5,337,169	+		TX73_024565	0.34	-0.4
5,337,256	+		TX73_024565	0.37	-3.0
5,337,264	+		TX73_024565	0.37	-0.3
5,337,264	+		TX73_024565	0.37	-2.1
5,337,267	-		TX73_024565	0.37	-1.4
5,337,267	-		TX73_024565	0.37	-1.5
5,337,269	+		TX73_024565	0.38	-1.4
5,337,270	+		TX73_024565	0.38	+0.4
5,337,325	-		TX73_024565	0.40	-2.7
5,337,397	+		TX73_024565	0.43	-1.1
5,337,397	+		TX73_024565	0.43	-2.9
5,337,407	+		TX73_024565	0.43	-0.9
5,337,419	+		TX73_024565	0.43	-2.3
5,337,426	-		TX73_024565	0.44	-0.3
5,337,428	-		TX73_024565	0.44	-0.7
5,337,436	-		TX73_024565	0.44	-0.2
5,337,441	+		TX73_024565	0.44	-0.9
5,337,441	+		TX73_024565	0.44	-0.6
5,337,446	+		TX73_024565	0.44	-0.7
5,337,446	+		TX73_024565	0.44	-1.7
5,337,446	+		TX73_024565	0.44	-1.5
5,337,446	+		TX73_024565	0.44	-0.3
5,337,451	+		TX73_024565	0.45	+0.2
5,337,457	+		TX73_024565	0.45	-1.5
5,337,459	-		TX73_024565	0.45	-3.5
5,337,464	+		TX73_024565	0.45	-0.5
5,337,465	-		TX73_024565	0.45	+1.5
5,337,470	+		TX73_024565	0.45	-1.2
5,337,484	+		TX73_024565	0.46	-0.2
5,337,484	+		TX73_024565	0.46	-0.3
5,337,568	+		TX73_024565	0.49	-0.9
5,337,586	-		TX73_024565	0.50	+0.3
5,337,591	-		TX73_024565	0.50	-0.2
5,337,591	-		TX73_024565	0.50	-0.4
5,337,591	-		TX73_024565	0.50	-1.1
5,337,592	+		TX73_024565	0.50	-1.2
5,337,594	+		TX73_024565	0.50	-0.9
5,337,594	+		TX73_024565	0.50	-0.8
5,337,672	+		TX73_024565	0.53	-0.4
5,337,723	-		TX73_024565	0.55	-0.1
5,337,723	-		TX73_024565	0.55	-2.3
5,337,749	+		TX73_024565	0.56	-1.6
5,337,757	-		TX73_024565	0.57	+0.0
5,337,784	-		TX73_024565	0.58	+0.3
5,337,798	-		TX73_024565	0.58	+0.7
5,337,802	+		TX73_024565	0.58	-0.8
5,337,805	-		TX73_024565	0.59	-0.6
5,337,810	-		TX73_024565	0.59	-1.5
5,337,810	-		TX73_024565	0.59	-0.4
5,337,812	+		TX73_024565	0.59	-3.1
5,337,812	+		TX73_024565	0.59	-0.6
5,337,812	+		TX73_024565	0.59	-0.4
5,337,817	+		TX73_024565	0.59	-0.8
5,337,817	+		TX73_024565	0.59	-1.2
5,337,825	-		TX73_024565	0.59	-0.7
5,337,825	-		TX73_024565	0.59	-2.2
5,337,861	+		TX73_024565	0.61	+0.2
5,337,869	-		TX73_024565	0.61	-0.1
5,337,869	-		TX73_024565	0.61	+2.3
5,337,890	+		TX73_024565	0.62	-3.0
5,337,929	+		TX73_024565	0.63	-2.7
5,337,937	+		TX73_024565	0.64	-3.9
5,337,958	-		TX73_024565	0.65	-1.9
5,338,000	-		TX73_024565	0.66	-0.2
5,338,024	-		TX73_024565	0.67	-0.2
5,338,028	+		TX73_024565	0.67	-0.5
5,338,036	-		TX73_024565	0.68	-1.1
5,338,079	-		TX73_024565	0.69	-0.0
5,338,079	-		TX73_024565	0.69	-1.7
5,338,083	+		TX73_024565	0.69	-1.0
5,338,096	-		TX73_024565	0.70	-0.3
5,338,096	-		TX73_024565	0.70	+0.1
5,338,096	-		TX73_024565	0.70	-1.8
5,338,107	+		TX73_024565	0.70	-0.9
5,338,147	-		TX73_024565	0.72	-1.1
5,338,325	+		TX73_024565	0.79	-1.4
5,338,352	-		TX73_024565	0.80	-1.2
5,338,363	+		TX73_024565	0.80	-1.4
5,338,371	-		TX73_024565	0.81	-2.9
5,338,371	-		TX73_024565	0.81	-1.8
5,338,374	+		TX73_024565	0.81	-2.5
5,338,374	+		TX73_024565	0.81	+0.1
5,338,382	-		TX73_024565	0.81	-1.9
5,338,382	-		TX73_024565	0.81	+0.6
5,338,427	-		TX73_024565	0.83	-0.7
5,338,475	+		TX73_024565	0.85	-1.3
5,338,482	-		TX73_024565	0.85	-0.3
5,338,495	+		TX73_024565	0.86	-0.2
5,338,529	-		TX73_024565	0.87	-1.0
5,338,585	-		TX73_024565	0.89	-0.7
5,338,646	+				-1.4
5,338,654	-				-1.5
5,338,659	-				-3.4
5,338,724	-				-0.8
5,338,724	-				-2.2
5,338,736	+				-0.6
5,338,742	-				-1.6
5,338,760	+				-1.3
5,338,760	+				-1.6
5,338,760	+				-0.3
5,338,768	-				-1.1
5,338,769	+				-2.1
5,338,798	-				-0.2
5,338,800	+				-0.2
5,338,807	-				-0.1
5,338,807	-				-0.5
5,338,845	+				+0.4
5,338,854	+				+0.4
5,338,854	+				+0.3
5,338,868	+				+0.3
5,338,870	+				-1.5
5,338,885	+				-0.3
5,338,885	+				-0.1
5,338,885	+				+0.7
5,338,890	+				+0.3
5,338,893	-				-0.3
5,339,082	+				-1.5
5,339,092	+				-1.5
5,339,153	-				-0.3
5,339,170	-				+0.0
5,339,188	-				-0.8
5,339,399	-		TX73_024570	0.31	-0.0
5,339,410	+		TX73_024570	0.32	+0.6
5,339,415	+		TX73_024570	0.33	+0.5
5,339,415	+		TX73_024570	0.33	-1.4
5,339,433	+		TX73_024570	0.35	+0.1
5,339,448	-		TX73_024570	0.37	+0.3
5,339,482	-		TX73_024570	0.41	+0.2
5,339,492	-		TX73_024570	0.42	-0.5
5,339,495	+		TX73_024570	0.43	+0.9
5,339,518	-		TX73_024570	0.45	-1.4
5,339,528	-		TX73_024570	0.47	-1.8
5,339,545	+		TX73_024570	0.49	-0.4
5,339,551	+		TX73_024570	0.49	-0.3
5,339,559	-		TX73_024570	0.50	-0.0
5,339,562	+		TX73_024570	0.51	+0.7
5,339,586	-		TX73_024570	0.53	-0.1
5,339,599	-		TX73_024570	0.55	-0.4
5,339,670	+		TX73_024570	0.64	+0.3
5,339,731	+		TX73_024570	0.71	-0.1
5,339,748	+		TX73_024570	0.73	-0.8
5,339,776	-		TX73_024570	0.76	+0.2
5,339,783	+		TX73_024570	0.77	-0.7
5,339,796	-		TX73_024570	0.79	+0.1
5,339,808	-		TX73_024570	0.80	-0.9