Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_011430

Experiment: MDC_bicarb with butyrate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MDC_bicarb with butyrate
2,498,277	-		TX73_011425	0.71	+0.2
2,498,284	+		TX73_011425	0.71	-0.7
2,498,334	+		TX73_011425	0.72	-0.4
2,498,344	+		TX73_011425	0.73	-0.6
2,498,354	-		TX73_011425	0.73	+1.0
2,498,359	-		TX73_011425	0.73	+0.1
2,498,372	+		TX73_011425	0.73	-0.0
2,498,397	+		TX73_011425	0.74	-0.6
2,498,405	-		TX73_011425	0.74	-0.1
2,498,442	+		TX73_011425	0.76	+0.6
2,498,450	+		TX73_011425	0.76	-0.8
2,498,458	-		TX73_011425	0.76	-0.1
2,498,474	-		TX73_011425	0.77	-0.3
2,498,499	-		TX73_011425	0.77	-1.6
2,498,528	+		TX73_011425	0.78	-0.3
2,498,545	-		TX73_011425	0.79	-0.6
2,498,545	-		TX73_011425	0.79	-0.2
2,498,550	-		TX73_011425	0.79	-0.5
2,498,563	-		TX73_011425	0.79	+0.4
2,498,580	-		TX73_011425	0.80	-0.5
2,498,618	-		TX73_011425	0.81	-0.2
2,498,662	+		TX73_011425	0.82	-1.1
2,498,674	+		TX73_011425	0.83	+0.0
2,498,682	-		TX73_011425	0.83	+1.4
2,498,682	-		TX73_011425	0.83	-0.3
2,498,696	-		TX73_011425	0.83	-1.6
2,498,743	+		TX73_011425	0.85	-0.8
2,498,747	+		TX73_011425	0.85	+0.2
2,498,751	-		TX73_011425	0.85	-0.4
2,498,760	-		TX73_011425	0.85	+0.4
2,498,774	+		TX73_011425	0.86	-0.5
2,498,822	+		TX73_011425	0.87	-0.4
2,498,822	+		TX73_011425	0.87	-0.8
2,498,830	-		TX73_011425	0.87	-1.7
2,498,846	+		TX73_011425	0.88	-0.1
2,498,846	+		TX73_011425	0.88	+0.5
2,498,846	+		TX73_011425	0.88	+0.4
2,498,854	-		TX73_011425	0.88	+0.2
2,498,854	-		TX73_011425	0.88	-0.3
2,498,854	-		TX73_011425	0.88	-0.1
2,498,865	+		TX73_011425	0.88	-0.2
2,498,869	+		TX73_011425	0.88	+0.3
2,498,870	+		TX73_011425	0.88	-0.2
2,498,877	-		TX73_011425	0.89	-0.6
2,498,878	-		TX73_011425	0.89	-0.4
2,498,878	-		TX73_011425	0.89	+0.4
2,498,882	-		TX73_011425	0.89	-0.3
2,498,884	+		TX73_011425	0.89	+0.1
2,498,891	-		TX73_011425	0.89	-0.7
2,498,891	-		TX73_011425	0.89	+0.1
2,498,914	-		TX73_011425	0.90	-0.4
2,498,914	-		TX73_011425	0.90	+0.4
2,498,925	-				-0.4
2,498,927	+				+0.3
2,498,955	+				+0.6
2,498,956	+				+0.0
2,498,963	-				-0.3
2,498,963	-				-0.5
2,499,062	+				-0.0
2,499,070	-				-0.9
2,499,070	-				-0.2
2,499,070	-				-0.3
2,499,095	+				-0.3
2,499,103	-				+0.3
2,499,103	-				-0.2
2,499,103	-				-0.6
2,499,110	+				-0.5
2,499,111	+				-0.3
2,499,113	-				-0.9
2,499,145	+				-0.6
2,499,148	-				-0.9
2,499,148	-				+1.8
2,499,158	-				-0.8
2,499,158	-				-2.5
2,499,158	-				-0.5
2,499,158	-				+0.6
2,499,158	-				+0.4
2,499,174	+				+0.5
2,499,189	-				-0.6
2,499,189	-				+0.2
2,499,201	-				-0.9
2,499,208	-				-0.6
2,499,218	-				+0.5
2,499,265	+				-0.4
2,499,270	+				-1.1
2,499,273	-				+0.1
2,499,304	-				-0.5
2,499,304	-				-0.4
2,499,324	-				-0.3
2,499,324	-				+0.2
2,499,324	-				-0.8
2,499,326	+				-0.1
2,499,326	+				+0.2
2,499,329	-				+0.8
2,499,334	-				-0.7
2,499,334	-				-0.3
2,499,334	-				-0.1
2,499,334	-				-0.7
2,499,347	-				+0.2
2,499,356	+				-0.5
2,499,360	-				-0.8
2,499,377	+				-0.9
2,499,392	-				+0.5
2,499,420	+				+0.2
2,499,421	-				+0.1
2,499,476	-				-0.7
2,499,528	+				-0.7
2,499,536	-				+0.1
2,499,536	-				-0.7
2,499,536	-				-0.1
2,499,541	-				-0.8
2,499,551	+				+0.4
2,499,565	+				-0.7
2,499,571	-				-0.1
2,499,578	+				-0.5
2,499,586	-				-0.4
2,499,595	+				-0.0
2,499,596	+				-0.2
2,499,596	+				-1.0
2,499,645	+		TX73_011430	0.11	-0.2
2,499,652	-		TX73_011430	0.11	-1.2
2,499,657	-		TX73_011430	0.11	+0.3
2,499,672	+		TX73_011430	0.12	+0.1
2,499,689	-		TX73_011430	0.12	+0.7
2,499,730	+		TX73_011430	0.13	+0.3
2,499,740	+		TX73_011430	0.14	+0.3
2,499,759	+		TX73_011430	0.14	+0.8
2,499,759	+		TX73_011430	0.14	+0.1
2,499,760	+		TX73_011430	0.14	-0.3
2,499,769	-		TX73_011430	0.14	-0.5
2,499,781	+		TX73_011430	0.15	-0.7
2,499,781	+		TX73_011430	0.15	-0.8
2,499,781	+		TX73_011430	0.15	+0.1
2,499,781	+		TX73_011430	0.15	-0.2
2,499,781	+		TX73_011430	0.15	+0.3
2,499,781	+		TX73_011430	0.15	-0.7
2,499,788	+		TX73_011430	0.15	-0.5
2,499,789	-		TX73_011430	0.15	-0.1
2,499,789	-		TX73_011430	0.15	-1.1
2,499,789	-		TX73_011430	0.15	+0.1
2,499,794	-		TX73_011430	0.15	+0.1
2,499,801	+		TX73_011430	0.15	-0.1
2,499,826	+		TX73_011430	0.16	+0.1
2,499,844	-		TX73_011430	0.17	-1.4
2,499,844	-		TX73_011430	0.17	+0.2
2,499,860	-		TX73_011430	0.17	+0.3
2,499,867	-		TX73_011430	0.17	+0.5
2,499,902	+		TX73_011430	0.18	-0.6
2,499,902	+		TX73_011430	0.18	-0.1
2,499,902	+		TX73_011430	0.18	+0.5
2,499,910	-		TX73_011430	0.19	+0.4
2,499,992	+		TX73_011430	0.21	-0.2
2,500,023	+		TX73_011430	0.22	-0.9
2,500,084	-		TX73_011430	0.24	-0.2
2,500,108	+		TX73_011430	0.24	-0.3
2,500,116	-		TX73_011430	0.25	-0.4
2,500,116	-		TX73_011430	0.25	-1.1
2,500,116	-		TX73_011430	0.25	+0.4
2,500,124	-		TX73_011430	0.25	-1.2
2,500,204	-		TX73_011430	0.27	+0.2
2,500,206	-		TX73_011430	0.27	+0.2
2,500,206	-		TX73_011430	0.27	-0.2
2,500,224	+		TX73_011430	0.28	-1.7
2,500,225	-		TX73_011430	0.28	-0.7
2,500,267	+		TX73_011430	0.29	-0.3
2,500,286	-		TX73_011430	0.30	+0.1
2,500,286	-		TX73_011430	0.30	+0.1
2,500,295	+		TX73_011430	0.30	-0.4
2,500,300	+		TX73_011430	0.30	-0.1
2,500,335	-		TX73_011430	0.31	+0.5
2,500,341	+		TX73_011430	0.31	+0.2
2,500,343	+		TX73_011430	0.31	+0.4
2,500,351	-		TX73_011430	0.32	-0.3
2,500,353	-		TX73_011430	0.32	+0.1
2,500,354	-		TX73_011430	0.32	+0.3
2,500,361	+		TX73_011430	0.32	+0.2
2,500,361	+		TX73_011430	0.32	-0.4
2,500,367	+		TX73_011430	0.32	-0.8
2,500,369	-		TX73_011430	0.32	-0.5
2,500,373	+		TX73_011430	0.32	-0.5
2,500,373	+		TX73_011430	0.32	+0.1
2,500,373	-		TX73_011430	0.32	+0.2
2,500,381	-		TX73_011430	0.32	-0.5
2,500,392	-		TX73_011430	0.33	-0.9
2,500,392	-		TX73_011430	0.33	+0.2
2,500,394	+		TX73_011430	0.33	-0.3
2,500,394	+		TX73_011430	0.33	-0.5
2,500,399	+		TX73_011430	0.33	+0.2
2,500,399	+		TX73_011430	0.33	-0.3
2,500,399	+		TX73_011430	0.33	+0.0
2,500,402	-		TX73_011430	0.33	+0.2
2,500,407	-		TX73_011430	0.33	-0.3
2,500,409	+		TX73_011430	0.33	-0.3
2,500,416	-		TX73_011430	0.33	-0.4
2,500,417	-		TX73_011430	0.34	-1.9
2,500,417	-		TX73_011430	0.34	+0.1
2,500,429	-		TX73_011430	0.34	-0.3
2,500,429	-		TX73_011430	0.34	+0.1
2,500,466	-		TX73_011430	0.35	-0.6
2,500,484	+		TX73_011430	0.35	+0.5
2,500,484	+		TX73_011430	0.35	+0.2
2,500,485	-		TX73_011430	0.36	-0.7
2,500,490	+		TX73_011430	0.36	-0.8
2,500,490	+		TX73_011430	0.36	+0.2
2,500,492	+		TX73_011430	0.36	+0.3
2,500,501	+		TX73_011430	0.36	-1.2
2,500,517	-		TX73_011430	0.36	+0.4
2,500,517	-		TX73_011430	0.36	-0.6
2,500,537	+		TX73_011430	0.37	-0.6
2,500,541	+		TX73_011430	0.37	-0.7
2,500,541	+		TX73_011430	0.37	+0.2
2,500,546	+		TX73_011430	0.37	+0.2
2,500,587	+		TX73_011430	0.39	-0.1
2,500,587	+		TX73_011430	0.39	-1.0
2,500,592	+		TX73_011430	0.39	+0.1
2,500,625	-		TX73_011430	0.40	+0.1
2,500,693	-		TX73_011430	0.42	+0.2
2,500,696	+		TX73_011430	0.42	-0.1
2,500,735	-		TX73_011430	0.43	+0.1
2,500,746	+		TX73_011430	0.43	-0.1
2,500,746	+		TX73_011430	0.43	-0.4
2,500,754	-		TX73_011430	0.43	-1.4
2,500,754	-		TX73_011430	0.43	-0.1
2,500,759	-		TX73_011430	0.44	+0.7
2,500,777	+		TX73_011430	0.44	-0.5
2,500,780	+		TX73_011430	0.44	-0.4
2,500,782	+		TX73_011430	0.44	+0.0
2,500,796	-		TX73_011430	0.45	-0.5
2,500,803	+		TX73_011430	0.45	+0.1
2,500,810	-		TX73_011430	0.45	+0.0
2,500,821	+		TX73_011430	0.45	-0.1
2,500,832	+		TX73_011430	0.46	-0.0
2,500,864	+		TX73_011430	0.47	+1.1
2,500,870	+		TX73_011430	0.47	-0.9
2,500,870	+		TX73_011430	0.47	-1.3
2,500,938	-		TX73_011430	0.49	+0.4
2,500,940	+		TX73_011430	0.49	-2.1
2,500,957	-		TX73_011430	0.49	-0.7
2,500,967	-		TX73_011430	0.50	-0.9
2,500,984	-		TX73_011430	0.50	-0.3
2,501,049	-		TX73_011430	0.52	-0.5
2,501,059	+		TX73_011430	0.52	+0.1
2,501,082	-		TX73_011430	0.53	-0.8
2,501,083	+		TX73_011430	0.53	+0.5
2,501,084	+		TX73_011430	0.53	-1.3
2,501,090	-		TX73_011430	0.53	-0.8
2,501,092	-		TX73_011430	0.53	+0.1
2,501,092	-		TX73_011430	0.53	-0.2
2,501,092	-		TX73_011430	0.53	+0.7
2,501,092	-		TX73_011430	0.53	-0.3
2,501,092	-		TX73_011430	0.53	-0.4
2,501,119	+		TX73_011430	0.54	-0.6
2,501,119	+		TX73_011430	0.54	-0.8
2,501,139	+		TX73_011430	0.55	+0.6
2,501,164	-		TX73_011430	0.55	-0.5
2,501,185	+		TX73_011430	0.56	+0.3
2,501,211	+		TX73_011430	0.57	+1.0
2,501,219	-		TX73_011430	0.57	-0.0
2,501,231	-		TX73_011430	0.57	-0.8
2,501,233	+		TX73_011430	0.57	-0.1
2,501,233	+		TX73_011430	0.57	+0.2
2,501,233	+		TX73_011430	0.57	+0.0
2,501,233	+		TX73_011430	0.57	+0.0
2,501,241	-		TX73_011430	0.58	+0.2
2,501,241	-		TX73_011430	0.58	+0.4
2,501,241	-		TX73_011430	0.58	-0.4
2,501,241	-		TX73_011430	0.58	-0.2
2,501,273	+		TX73_011430	0.59	+1.5
2,501,280	+		TX73_011430	0.59	-0.1
2,501,290	-		TX73_011430	0.59	-0.8
2,501,303	-		TX73_011430	0.60	+0.5
2,501,340	-		TX73_011430	0.61	+0.0
2,501,413	+		TX73_011430	0.63	-0.1
2,501,419	-		TX73_011430	0.63	-1.0
2,501,458	-		TX73_011430	0.64	-0.8
2,501,459	+		TX73_011430	0.64	-0.5
2,501,484	+		TX73_011430	0.65	-0.8
2,501,512	+		TX73_011430	0.66	-0.9
2,501,592	-		TX73_011430	0.68	-0.4
2,501,592	-		TX73_011430	0.68	+0.4
2,501,612	+		TX73_011430	0.69	+0.3
2,501,620	-		TX73_011430	0.69	-0.1
2,501,636	-		TX73_011430	0.69	+2.1
2,501,638	+		TX73_011430	0.69	-0.1
2,501,638	+		TX73_011430	0.69	+0.2
2,501,648	+		TX73_011430	0.70	+0.2
2,501,648	+		TX73_011430	0.70	-0.1
2,501,648	+		TX73_011430	0.70	-0.5
2,501,652	+		TX73_011430	0.70	+0.2
2,501,656	-		TX73_011430	0.70	-0.4
2,501,656	-		TX73_011430	0.70	-1.0
2,501,658	-		TX73_011430	0.70	-0.1
2,501,668	+		TX73_011430	0.70	+0.1
2,501,684	-		TX73_011430	0.71	-0.1
2,501,684	-		TX73_011430	0.71	+0.1
2,501,684	-		TX73_011430	0.71	-0.0
2,501,703	+		TX73_011430	0.71	-1.4
2,501,703	+		TX73_011430	0.71	-1.1
2,501,707	+		TX73_011430	0.71	-0.0
2,501,711	-		TX73_011430	0.72	-0.3
2,501,711	-		TX73_011430	0.72	-0.2
2,501,737	-		TX73_011430	0.72	-0.8
2,501,752	+		TX73_011430	0.73	+0.2
2,501,752	+		TX73_011430	0.73	-0.3
2,501,765	+		TX73_011430	0.73	-0.6
2,501,771	+		TX73_011430	0.73	-0.8
2,501,806	-		TX73_011430	0.74	-0.5
2,501,806	-		TX73_011430	0.74	-0.3
2,501,849	+		TX73_011430	0.76	+0.2
2,501,856	+		TX73_011430	0.76	-0.4
2,501,856	+		TX73_011430	0.76	+0.1
2,501,861	+		TX73_011430	0.76	-0.3
2,501,861	+		TX73_011430	0.76	-1.0
2,501,923	+		TX73_011430	0.78	-0.3
2,501,929	-		TX73_011430	0.78	-0.1
2,501,964	-		TX73_011430	0.79	+0.2
2,501,998	+		TX73_011430	0.80	-0.1
2,502,001	-		TX73_011430	0.80	-0.2
2,502,006	-		TX73_011430	0.80	+0.3
2,502,043	+		TX73_011430	0.81	-0.3
2,502,048	+		TX73_011430	0.81	+0.4
2,502,056	-		TX73_011430	0.82	-0.3
2,502,088	-		TX73_011430	0.83	-0.1
2,502,145	-		TX73_011430	0.84	-1.0
2,502,171	-		TX73_011430	0.85	-0.6
2,502,179	+		TX73_011430	0.85	-0.5
2,502,187	-		TX73_011430	0.86	+2.8
2,502,187	-		TX73_011430	0.86	+0.1
2,502,187	-		TX73_011430	0.86	-0.9
2,502,187	-		TX73_011430	0.86	-0.7
2,502,187	-		TX73_011430	0.86	-0.5
2,502,202	+		TX73_011430	0.86	-0.1
2,502,223	+		TX73_011430	0.87	-0.3
2,502,231	-		TX73_011430	0.87	-0.4
2,502,263	+		TX73_011430	0.88	-0.2
2,502,290	+		TX73_011430	0.89	-0.8
2,502,298	-		TX73_011430	0.89	-0.7
2,502,313	+		TX73_011430	0.89	+0.2
2,502,314	-		TX73_011430	0.89	+0.2
2,502,324	-		TX73_011430	0.90	-0.1
2,502,384	-				-0.3
2,502,423	+				+0.1
2,502,431	-				-0.8
2,502,431	-				+0.0
2,502,442	-				+0.0
2,502,462	-				+0.4
2,502,466	+				-0.9
2,502,485	+				+0.7
2,502,492	+				-0.1
2,502,492	+				-0.7
2,502,585	-				-0.1
2,502,603	+				-0.6
2,502,666	-				-0.6
2,502,681	-				+0.8
2,502,681	-				-1.8
2,502,681	-				-0.3
2,502,686	-				-0.4
2,502,688	+				+1.3
2,502,688	+				-0.4
2,502,688	+				-0.9
2,502,696	-				-2.3
2,502,696	-				-0.0
2,502,696	-				+0.1
2,502,696	-				+0.1
2,502,696	-				-0.2
2,502,696	-				-0.2
2,502,696	-				-0.3
2,502,701	-				-0.3
2,502,742	-				-0.1
2,502,755	+				+0.6
2,502,767	+				-0.1
2,502,780	+				+0.1
2,502,780	+				+0.1
2,502,816	+				+0.2
2,502,832	+				-1.5
2,502,840	-				-1.1
2,502,840	-				-0.3
2,502,840	-				-1.3
2,502,887	+				-0.5
2,502,940	+				-0.9
2,502,943	-				-0.4
2,502,943	-				+0.0
2,502,943	-				+0.1
2,502,971	+		TX73_011435	0.11	-0.4
2,502,994	-		TX73_011435	0.12	-0.8
2,502,994	-		TX73_011435	0.12	-0.6
2,503,150	+		TX73_011435	0.18	-1.3
2,503,169	+		TX73_011435	0.18	-0.9
2,503,177	-		TX73_011435	0.19	+0.4
2,503,241	-		TX73_011435	0.21	-0.5
2,503,257	-		TX73_011435	0.22	+0.3
2,503,257	-		TX73_011435	0.22	+0.5
2,503,278	-		TX73_011435	0.23	-0.3
2,503,303	-		TX73_011435	0.23	-0.5
2,503,308	-		TX73_011435	0.24	-0.3
2,503,308	-		TX73_011435	0.24	-0.6
2,503,345	+		TX73_011435	0.25	-0.4
2,503,353	+		TX73_011435	0.25	-0.0
2,503,383	+		TX73_011435	0.26	-0.6
2,503,391	-		TX73_011435	0.27	-0.1
2,503,391	-		TX73_011435	0.27	-0.9
2,503,460	-		TX73_011435	0.29	-0.5
2,503,495	-		TX73_011435	0.31	-0.1
2,503,508	+		TX73_011435	0.31	+0.1
2,503,508	+		TX73_011435	0.31	-0.7
2,503,508	+		TX73_011435	0.31	-0.0
2,503,508	+		TX73_011435	0.31	-0.3
2,503,508	+		TX73_011435	0.31	-0.6
2,503,508	+		TX73_011435	0.31	-1.5
2,503,508	+		TX73_011435	0.31	-0.4
2,503,509	+		TX73_011435	0.31	-0.0
2,503,514	-		TX73_011435	0.31	-0.8
2,503,516	-		TX73_011435	0.31	-1.0
2,503,516	-		TX73_011435	0.31	+0.3
2,503,516	-		TX73_011435	0.31	+0.3
2,503,531	-		TX73_011435	0.32	+0.0
2,503,541	+		TX73_011435	0.32	+0.5
2,503,549	-		TX73_011435	0.33	+0.0
2,503,549	-		TX73_011435	0.33	+0.1
2,503,549	-		TX73_011435	0.33	-0.1
2,503,573	-		TX73_011435	0.34	+0.2
2,503,607	-		TX73_011435	0.35	-0.6
2,503,611	+		TX73_011435	0.35	-0.4
2,503,616	-		TX73_011435	0.35	-0.2
2,503,619	-		TX73_011435	0.35	-0.2
2,503,620	+		TX73_011435	0.35	-0.1
2,503,643	-		TX73_011435	0.36	-0.1
2,503,652	+		TX73_011435	0.37	-2.0
2,503,652	+		TX73_011435	0.37	-0.1
2,503,660	-		TX73_011435	0.37	+0.1
2,503,660	-		TX73_011435	0.37	-0.9
2,503,677	+		TX73_011435	0.38	-0.6