Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_015700

Experiment: PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
3,431,994	-		TX73_015690	0.79	-1.9
3,432,063	+		TX73_015690	0.90	-0.5
3,432,066	-				+0.4
3,432,088	+				-1.2
3,432,096	-				+0.4
3,432,096	-				-0.1
3,432,111	-				-0.1
3,432,130	-				+0.6
3,432,139	+				-0.5
3,432,140	-				+0.5
3,432,154	-				-1.2
3,432,156	+				-0.0
3,432,160	-				+0.3
3,432,160	-				+0.2
3,432,160	-				+0.3
3,432,172	+				-1.6
3,432,172	+				-1.6
3,432,172	+				+0.2
3,432,175	-				-1.0
3,432,180	-				-1.1
3,432,304	+				+0.1
3,432,304	+				+1.8
3,432,304	+				-1.1
3,432,304	+				+0.8
3,432,312	-				+0.5
3,432,312	-				-0.3
3,432,337	+				-0.1
3,432,345	-				+0.2
3,432,368	-				-0.4
3,432,369	+				+0.1
3,432,377	-				+0.7
3,432,382	+				+0.8
3,432,400	-				-0.7
3,432,446	-		TX73_015695	0.16	-0.5
3,432,450	+		TX73_015695	0.17	-0.4
3,432,457	-		TX73_015695	0.19	+0.7
3,432,457	-		TX73_015695	0.19	+0.7
3,432,483	+		TX73_015695	0.25	-0.1
3,432,544	+		TX73_015695	0.41	+0.2
3,432,557	-		TX73_015695	0.44	-0.3
3,432,562	-		TX73_015695	0.45	-0.6
3,432,583	+		TX73_015695	0.50	+0.5
3,432,584	+		TX73_015695	0.51	+0.4
3,432,600	+		TX73_015695	0.55	+0.2
3,432,608	+		TX73_015695	0.57	+0.2
3,432,608	+		TX73_015695	0.57	-0.8
3,432,619	+		TX73_015695	0.59	+0.6
3,432,656	+		TX73_015695	0.69	+0.2
3,432,656	+		TX73_015695	0.69	+0.8
3,432,656	+		TX73_015695	0.69	+0.5
3,432,656	-		TX73_015695	0.69	-0.1
3,432,658	+		TX73_015695	0.69	-0.1
3,432,664	-		TX73_015695	0.71	-0.1
3,432,709	-		TX73_015695	0.82	-0.5
3,432,718	+		TX73_015695	0.84	+0.2
3,432,750	+				-0.1
3,432,768	+				-1.0
3,432,796	-				+1.8
3,432,826	+				-0.3
3,432,848	-				-0.2
3,432,850	+				+0.8
3,432,890	-				-0.8
3,432,892	+				-0.1
3,432,901	-				+0.1
3,432,919	+				+0.8
3,432,925	+				-0.5
3,432,925	+				-0.4
3,432,932	-				-1.8
3,432,936	+				-0.2
3,432,941	+				+0.8
3,432,956	+				+0.4
3,432,961	+				+0.7
3,432,964	-				+0.3
3,432,964	-				+0.3
3,432,964	-				+0.5
3,432,964	-				+0.9
3,432,964	-				-0.2
3,432,997	+				+0.3
3,433,014	-				+0.3
3,433,015	-				+0.3
3,433,046	+				+0.1
3,433,066	+		TX73_015700	0.11	-0.7
3,433,079	+		TX73_015700	0.12	-0.1
3,433,079	+		TX73_015700	0.12	+0.6
3,433,099	-		TX73_015700	0.13	+0.2
3,433,132	+		TX73_015700	0.16	+0.2
3,433,132	+		TX73_015700	0.16	+0.6
3,433,132	+		TX73_015700	0.16	+0.8
3,433,132	+		TX73_015700	0.16	-0.7
3,433,140	-		TX73_015700	0.17	+0.5
3,433,140	-		TX73_015700	0.17	+0.7
3,433,156	+		TX73_015700	0.18	+0.6
3,433,179	-		TX73_015700	0.20	-0.3
3,433,191	+		TX73_015700	0.21	-0.2
3,433,221	+		TX73_015700	0.23	-0.7
3,433,290	-		TX73_015700	0.28	+0.1
3,433,290	-		TX73_015700	0.28	+0.6
3,433,316	-		TX73_015700	0.30	-0.2
3,433,328	+		TX73_015700	0.31	+0.2
3,433,346	+		TX73_015700	0.33	+0.7
3,433,359	-		TX73_015700	0.34	+0.7
3,433,381	-		TX73_015700	0.35	+0.3
3,433,385	+		TX73_015700	0.36	-1.8
3,433,393	-		TX73_015700	0.36	+0.7
3,433,393	-		TX73_015700	0.36	-1.8
3,433,409	-		TX73_015700	0.38	+0.9
3,433,467	-		TX73_015700	0.42	-1.3
3,433,469	+		TX73_015700	0.42	-0.5
3,433,518	+		TX73_015700	0.46	+0.5
3,433,519	+		TX73_015700	0.46	-0.7
3,433,527	-		TX73_015700	0.47	-0.4
3,433,551	+		TX73_015700	0.49	+0.9
3,433,572	+		TX73_015700	0.50	-2.6
3,433,576	+		TX73_015700	0.51	-0.5
3,433,579	+		TX73_015700	0.51	-0.8
3,433,626	-		TX73_015700	0.54	+1.1
3,433,631	-		TX73_015700	0.55	-0.8
3,433,664	+		TX73_015700	0.57	+0.9
3,433,672	-		TX73_015700	0.58	-0.5
3,433,690	+		TX73_015700	0.59	+1.5
3,433,691	-		TX73_015700	0.60	-0.5
3,433,696	-		TX73_015700	0.60	-1.0
3,433,719	+		TX73_015700	0.62	+0.2
3,433,720	+		TX73_015700	0.62	+0.8
3,433,725	+		TX73_015700	0.62	-0.1
3,433,730	+		TX73_015700	0.63	-0.0
3,433,735	+		TX73_015700	0.63	-0.4
3,433,740	+		TX73_015700	0.63	-0.4
3,433,760	-		TX73_015700	0.65	+0.2
3,433,761	+		TX73_015700	0.65	+0.3
3,433,766	+		TX73_015700	0.65	-0.6
3,433,814	-		TX73_015700	0.69	-0.7
3,433,820	+		TX73_015700	0.70	+0.6
3,433,837	-		TX73_015700	0.71	+0.3
3,433,841	+		TX73_015700	0.71	+0.1
3,433,858	+		TX73_015700	0.73	+0.1
3,433,862	+		TX73_015700	0.73	+0.8
3,433,872	-		TX73_015700	0.74	-0.5
3,433,916	-		TX73_015700	0.77	+0.4
3,433,928	-		TX73_015700	0.78	+0.8
3,433,930	+		TX73_015700	0.78	-0.4
3,433,946	+		TX73_015700	0.79	+0.2
3,433,946	+		TX73_015700	0.79	+0.3
3,433,946	+		TX73_015700	0.79	-0.3
3,433,949	-		TX73_015700	0.80	-0.3
3,433,952	+		TX73_015700	0.80	+0.4
3,433,954	-		TX73_015700	0.80	-1.6
3,433,954	-		TX73_015700	0.80	+0.4
3,433,954	-		TX73_015700	0.80	+0.8
3,433,954	-		TX73_015700	0.80	+0.4
3,433,989	+		TX73_015700	0.83	-0.2
3,433,989	+		TX73_015700	0.83	-0.1
3,433,989	+		TX73_015700	0.83	+1.5
3,433,989	+		TX73_015700	0.83	+0.9
3,433,989	+		TX73_015700	0.83	+0.3
3,433,989	+		TX73_015700	0.83	+0.0
3,433,989	+		TX73_015700	0.83	+1.0
3,433,997	-		TX73_015700	0.83	-0.9
3,433,997	-		TX73_015700	0.83	-0.2
3,433,997	-		TX73_015700	0.83	+0.4
3,433,997	-		TX73_015700	0.83	-0.5
3,434,006	+		TX73_015700	0.84	+0.2
3,434,079	+		TX73_015700	0.90	+0.8
3,434,087	-				+0.5
3,434,092	+				-0.5
3,434,136	+				+0.5
3,434,267	-				+0.5
3,434,293	-				+0.0
3,434,306	-				-0.4
3,434,335	-				-0.7
3,434,363	-				-0.6
3,434,368	+		TX73_015705	0.10	-1.5
3,434,378	+		TX73_015705	0.14	-2.5
3,434,390	+		TX73_015705	0.19	+0.2
3,434,419	-		TX73_015705	0.30	-0.7
3,434,426	+		TX73_015705	0.32	-1.1
3,434,429	+		TX73_015705	0.33	-1.0
3,434,447	+		TX73_015705	0.40	-0.0
3,434,450	-		TX73_015705	0.41	+0.7
3,434,462	+		TX73_015705	0.46	-0.8
3,434,487	-		TX73_015705	0.55	-1.9
3,434,523	+		TX73_015705	0.69	+0.6
3,434,523	+		TX73_015705	0.69	-0.8
3,434,523	+		TX73_015705	0.69	-1.3
3,434,531	-		TX73_015705	0.72	-3.5
3,434,562	-		TX73_015705	0.84	-1.3
3,434,574	+		TX73_015705	0.88	+0.2
3,434,613	-				-1.3
3,434,622	-				-0.8
3,434,624	+				+1.2
3,434,632	-				-0.1
3,434,649	+				+0.0
3,434,657	+				-0.2
3,434,670	+				-1.3
3,434,680	+		TX73_015710	0.13	+0.1
3,434,775	+		TX73_015710	0.38	-0.2
3,434,775	+		TX73_015710	0.38	+0.8
3,434,776	-		TX73_015710	0.38	+0.5
3,434,824	-		TX73_015710	0.51	+0.4
3,434,863	-		TX73_015710	0.61	-0.9
3,434,876	+		TX73_015710	0.65	+0.7
3,434,889	-		TX73_015710	0.68	-0.5
3,434,898	-		TX73_015710	0.71	+1.4
3,434,910	+		TX73_015710	0.74	-0.2
3,434,918	-		TX73_015710	0.76	-1.7
3,434,932	+		TX73_015710	0.80	-0.2
3,434,932	+		TX73_015710	0.80	+0.2
3,434,932	+		TX73_015710	0.80	-0.7
3,434,932	+		TX73_015710	0.80	-3.0
3,434,932	+		TX73_015710	0.80	-0.2
3,434,932	+		TX73_015710	0.80	-0.2
3,434,932	+		TX73_015710	0.80	-0.1
3,434,932	+		TX73_015710	0.80	+0.7
3,434,932	+		TX73_015710	0.80	-0.3
3,434,932	+		TX73_015710	0.80	+0.0
3,434,932	+		TX73_015710	0.80	-0.1
3,434,934	+		TX73_015710	0.80	-0.0
3,434,935	-		TX73_015710	0.81	+0.4
3,434,939	+		TX73_015710	0.82	-0.0
3,434,940	+		TX73_015710	0.82	-0.9
3,434,940	-		TX73_015710	0.82	-1.4
3,434,940	-		TX73_015710	0.82	-0.6
3,434,940	-		TX73_015710	0.82	-0.5
3,434,940	-		TX73_015710	0.82	-0.8
3,434,940	-		TX73_015710	0.82	-1.2
3,434,940	-		TX73_015710	0.82	-0.3
3,434,940	-		TX73_015710	0.82	-0.3
3,434,940	-		TX73_015710	0.82	-0.1
3,434,940	-		TX73_015710	0.82	+0.6
3,434,940	-		TX73_015710	0.82	-0.3
3,434,940	-		TX73_015710	0.82	+0.3
3,434,940	-		TX73_015710	0.82	+0.7
3,434,971	+				+0.1
3,435,006	+				+0.6
3,435,014	-				-0.5
3,435,054	-				-0.1
3,435,056	+				-0.8
3,435,064	-				-1.0
3,435,069	-				-0.3
3,435,072	-				-0.5
3,435,103	+				-0.7
3,435,106	-				+0.6
3,435,132	+				-1.7
3,435,140	-				-0.4
3,435,140	-				+1.6
3,435,197	-				-1.0
3,435,205	-				-0.5