Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_011425

Experiment: PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
2,494,918	-		TX73_011420	0.20	+0.1
2,494,934	+		TX73_011420	0.22	-0.7
2,494,942	-		TX73_011420	0.22	-1.0
2,494,944	-		TX73_011420	0.22	+0.8
2,494,949	-		TX73_011420	0.23	+0.1
2,494,980	+		TX73_011420	0.25	-0.3
2,494,992	+		TX73_011420	0.26	-0.6
2,494,997	+		TX73_011420	0.27	-0.4
2,495,022	+		TX73_011420	0.29	+0.1
2,495,054	-		TX73_011420	0.32	-0.4
2,495,067	+		TX73_011420	0.33	+0.5
2,495,087	-		TX73_011420	0.34	+0.6
2,495,092	+		TX73_011420	0.35	+0.3
2,495,114	+		TX73_011420	0.37	-2.1
2,495,133	-		TX73_011420	0.38	-0.7
2,495,169	+		TX73_011420	0.41	+0.2
2,495,177	-		TX73_011420	0.42	-1.4
2,495,182	+		TX73_011420	0.42	-3.1
2,495,214	-		TX73_011420	0.45	-0.2
2,495,271	+		TX73_011420	0.50	-0.1
2,495,279	-		TX73_011420	0.51	-0.5
2,495,298	+		TX73_011420	0.52	-1.3
2,495,300	-		TX73_011420	0.52	+1.3
2,495,306	-		TX73_011420	0.53	-0.7
2,495,308	+		TX73_011420	0.53	+0.1
2,495,308	+		TX73_011420	0.53	-1.0
2,495,316	-		TX73_011420	0.54	-0.3
2,495,316	-		TX73_011420	0.54	-0.4
2,495,316	-		TX73_011420	0.54	-0.8
2,495,331	-		TX73_011420	0.55	-0.0
2,495,331	-		TX73_011420	0.55	-0.2
2,495,331	-		TX73_011420	0.55	-0.5
2,495,331	-		TX73_011420	0.55	-0.7
2,495,352	+		TX73_011420	0.57	+0.1
2,495,352	-		TX73_011420	0.57	-0.2
2,495,357	+		TX73_011420	0.57	+0.3
2,495,357	+		TX73_011420	0.57	-0.8
2,495,360	-		TX73_011420	0.57	+0.4
2,495,360	-		TX73_011420	0.57	-0.3
2,495,365	-		TX73_011420	0.58	-0.0
2,495,365	-		TX73_011420	0.58	-1.4
2,495,365	-		TX73_011420	0.58	-0.6
2,495,427	-		TX73_011420	0.63	-1.0
2,495,436	+		TX73_011420	0.64	-0.7
2,495,436	+		TX73_011420	0.64	-0.1
2,495,439	-		TX73_011420	0.64	+0.2
2,495,484	+		TX73_011420	0.68	-1.0
2,495,496	+		TX73_011420	0.69	-0.7
2,495,503	+		TX73_011420	0.70	-0.6
2,495,508	+		TX73_011420	0.70	+0.2
2,495,508	+		TX73_011420	0.70	+0.3
2,495,508	+		TX73_011420	0.70	-0.0
2,495,513	+		TX73_011420	0.70	+0.2
2,495,516	-		TX73_011420	0.71	+0.1
2,495,518	+		TX73_011420	0.71	-1.0
2,495,518	+		TX73_011420	0.71	+0.1
2,495,518	-		TX73_011420	0.71	-0.0
2,495,520	+		TX73_011420	0.71	-0.1
2,495,520	+		TX73_011420	0.71	-0.7
2,495,520	+		TX73_011420	0.71	-0.1
2,495,520	+		TX73_011420	0.71	-0.1
2,495,520	+		TX73_011420	0.71	-0.5
2,495,520	+		TX73_011420	0.71	-0.2
2,495,526	-		TX73_011420	0.71	-1.0
2,495,526	-		TX73_011420	0.71	-0.2
2,495,527	+		TX73_011420	0.72	-0.4
2,495,528	-		TX73_011420	0.72	+0.4
2,495,528	-		TX73_011420	0.72	-2.4
2,495,599	+		TX73_011420	0.78	-1.1
2,495,605	-		TX73_011420	0.78	+0.2
2,495,614	-		TX73_011420	0.79	+0.4
2,495,657	-		TX73_011420	0.83	-2.3
2,495,668	+		TX73_011420	0.83	-0.1
2,495,673	+		TX73_011420	0.84	+0.0
2,495,707	-		TX73_011420	0.87	-0.9
2,495,800	-				+0.7
2,495,802	+				-0.7
2,495,802	+				+0.3
2,495,852	-				-0.6
2,495,861	-				-0.5
2,495,861	-				-0.5
2,495,923	-				+0.7
2,495,947	-				-2.4
2,496,058	+				+0.2
2,496,157	-				-0.1
2,496,160	+				+0.4
2,496,162	-				+0.9
2,496,168	-				+0.3
2,496,307	-		TX73_011425	0.12	-1.7
2,496,325	+		TX73_011425	0.12	+0.1
2,496,379	-		TX73_011425	0.14	+0.2
2,496,414	+		TX73_011425	0.15	+0.6
2,496,414	+		TX73_011425	0.15	-1.0
2,496,439	+		TX73_011425	0.16	-0.8
2,496,447	-		TX73_011425	0.16	-0.9
2,496,470	+		TX73_011425	0.17	-0.6
2,496,480	+		TX73_011425	0.17	+0.0
2,496,480	+		TX73_011425	0.17	+2.0
2,496,488	-		TX73_011425	0.17	-0.3
2,496,488	-		TX73_011425	0.17	-0.4
2,496,488	-		TX73_011425	0.17	-0.7
2,496,488	-		TX73_011425	0.17	-0.4
2,496,505	+		TX73_011425	0.18	-0.7
2,496,513	-		TX73_011425	0.18	+0.1
2,496,514	-		TX73_011425	0.18	-1.3
2,496,518	-		TX73_011425	0.18	-0.6
2,496,526	+		TX73_011425	0.18	+0.4
2,496,534	-		TX73_011425	0.18	-0.1
2,496,538	+		TX73_011425	0.19	-0.5
2,496,538	+		TX73_011425	0.19	-0.6
2,496,538	+		TX73_011425	0.19	-0.1
2,496,538	+		TX73_011425	0.19	+0.4
2,496,538	+		TX73_011425	0.19	-0.4
2,496,545	-		TX73_011425	0.19	-1.3
2,496,545	-		TX73_011425	0.19	-1.1
2,496,546	-		TX73_011425	0.19	+0.7
2,496,556	-		TX73_011425	0.19	-0.3
2,496,568	-		TX73_011425	0.20	-0.3
2,496,627	-		TX73_011425	0.21	-0.1
2,496,627	-		TX73_011425	0.21	+0.4
2,496,658	+		TX73_011425	0.22	-0.1
2,496,659	-		TX73_011425	0.22	+0.2
2,496,659	-		TX73_011425	0.22	+0.4
2,496,663	+		TX73_011425	0.22	-0.1
2,496,663	+		TX73_011425	0.22	-1.4
2,496,666	-		TX73_011425	0.22	-1.1
2,496,700	+		TX73_011425	0.23	-0.1
2,496,734	+		TX73_011425	0.24	+1.0
2,496,734	-		TX73_011425	0.24	+0.3
2,496,757	-		TX73_011425	0.25	-0.3
2,496,773	+		TX73_011425	0.26	-0.4
2,496,773	+		TX73_011425	0.26	+1.5
2,496,773	+		TX73_011425	0.26	+0.0
2,496,773	+		TX73_011425	0.26	+0.3
2,496,781	-		TX73_011425	0.26	+0.3
2,496,781	-		TX73_011425	0.26	+0.1
2,496,781	-		TX73_011425	0.26	+0.3
2,496,798	+		TX73_011425	0.26	+0.4
2,496,798	+		TX73_011425	0.26	+0.3
2,496,840	-		TX73_011425	0.28	+0.2
2,496,852	+		TX73_011425	0.28	-0.4
2,496,859	+		TX73_011425	0.28	+0.8
2,496,932	-		TX73_011425	0.30	-0.5
2,496,935	+		TX73_011425	0.30	+0.1
2,496,940	-		TX73_011425	0.31	-1.3
2,496,956	-		TX73_011425	0.31	-0.3
2,496,984	-		TX73_011425	0.32	+0.1
2,496,992	+		TX73_011425	0.32	-0.6
2,497,013	+		TX73_011425	0.33	-0.0
2,497,029	+		TX73_011425	0.33	-0.1
2,497,037	-		TX73_011425	0.34	+0.1
2,497,074	+		TX73_011425	0.35	+0.2
2,497,128	+		TX73_011425	0.36	-1.2
2,497,128	+		TX73_011425	0.36	+0.6
2,497,128	+		TX73_011425	0.36	+0.6
2,497,128	+		TX73_011425	0.36	-0.1
2,497,136	-		TX73_011425	0.37	-0.0
2,497,136	-		TX73_011425	0.37	-0.6
2,497,187	+		TX73_011425	0.38	-1.1
2,497,199	+		TX73_011425	0.38	-0.1
2,497,207	-		TX73_011425	0.39	-0.4
2,497,232	+		TX73_011425	0.39	-0.2
2,497,240	+		TX73_011425	0.40	-1.1
2,497,242	+		TX73_011425	0.40	+0.5
2,497,319	+		TX73_011425	0.42	-1.0
2,497,329	+		TX73_011425	0.42	-0.3
2,497,333	+		TX73_011425	0.42	+0.5
2,497,333	+		TX73_011425	0.42	-1.6
2,497,333	+		TX73_011425	0.42	-1.6
2,497,350	+		TX73_011425	0.43	-0.6
2,497,350	+		TX73_011425	0.43	-0.6
2,497,353	-		TX73_011425	0.43	+0.4
2,497,353	-		TX73_011425	0.43	-1.0
2,497,358	-		TX73_011425	0.43	-1.4
2,497,358	-		TX73_011425	0.43	-0.3
2,497,365	-		TX73_011425	0.43	+0.8
2,497,365	-		TX73_011425	0.43	-0.4
2,497,376	+		TX73_011425	0.44	-1.6
2,497,376	+		TX73_011425	0.44	-0.9
2,497,386	-		TX73_011425	0.44	+0.7
2,497,410	+		TX73_011425	0.45	-0.3
2,497,419	+		TX73_011425	0.45	-1.3
2,497,419	+		TX73_011425	0.45	-0.2
2,497,465	+		TX73_011425	0.46	+0.1
2,497,472	+		TX73_011425	0.47	+0.1
2,497,492	-		TX73_011425	0.47	+0.2
2,497,498	+		TX73_011425	0.47	-0.7
2,497,498	+		TX73_011425	0.47	-0.7
2,497,506	-		TX73_011425	0.48	-0.5
2,497,513	+		TX73_011425	0.48	+0.6
2,497,523	+		TX73_011425	0.48	-0.3
2,497,523	+		TX73_011425	0.48	+0.1
2,497,553	-		TX73_011425	0.49	-1.5
2,497,558	+		TX73_011425	0.49	+0.4
2,497,558	+		TX73_011425	0.49	-0.6
2,497,584	-		TX73_011425	0.50	+0.7
2,497,611	-		TX73_011425	0.51	+0.2
2,497,615	+		TX73_011425	0.51	+0.4
2,497,638	+		TX73_011425	0.52	+0.3
2,497,663	+		TX73_011425	0.52	-0.0
2,497,677	-		TX73_011425	0.53	+0.1
2,497,677	-		TX73_011425	0.53	-0.1
2,497,677	-		TX73_011425	0.53	+0.3
2,497,677	-		TX73_011425	0.53	-1.0
2,497,681	-		TX73_011425	0.53	-0.4
2,497,697	+		TX73_011425	0.53	+0.8
2,497,705	-		TX73_011425	0.54	+0.7
2,497,708	+		TX73_011425	0.54	-0.3
2,497,710	-		TX73_011425	0.54	-1.1
2,497,731	-		TX73_011425	0.54	-1.0
2,497,779	+		TX73_011425	0.56	+0.1
2,497,827	+		TX73_011425	0.57	+0.0
2,497,836	+		TX73_011425	0.57	-0.2
2,497,847	-		TX73_011425	0.58	-0.1
2,497,847	-		TX73_011425	0.58	+0.1
2,497,860	-		TX73_011425	0.58	-0.8
2,497,862	+		TX73_011425	0.58	-1.4
2,497,894	-		TX73_011425	0.59	-1.2
2,497,952	+		TX73_011425	0.61	+0.7
2,497,952	+		TX73_011425	0.61	-0.4
2,497,952	+		TX73_011425	0.61	-1.3
2,497,960	-		TX73_011425	0.61	-0.3
2,497,967	-		TX73_011425	0.61	-0.4
2,497,969	-		TX73_011425	0.61	-0.5
2,497,996	+		TX73_011425	0.62	-0.1
2,498,008	+		TX73_011425	0.63	-0.4
2,498,008	+		TX73_011425	0.63	-3.0
2,498,036	+		TX73_011425	0.63	+0.4
2,498,044	+		TX73_011425	0.64	+1.1
2,498,044	+		TX73_011425	0.64	-0.5
2,498,047	-		TX73_011425	0.64	-0.3
2,498,055	+		TX73_011425	0.64	-0.2
2,498,069	-		TX73_011425	0.64	-0.9
2,498,124	+		TX73_011425	0.66	-0.2
2,498,142	-		TX73_011425	0.67	-0.9
2,498,144	+		TX73_011425	0.67	-0.3
2,498,157	-		TX73_011425	0.67	+0.1
2,498,161	+		TX73_011425	0.67	+0.7
2,498,190	-		TX73_011425	0.68	-0.4
2,498,213	+		TX73_011425	0.69	-0.8
2,498,218	+		TX73_011425	0.69	-3.0
2,498,223	+		TX73_011425	0.69	-1.1
2,498,224	-		TX73_011425	0.69	+0.4
2,498,225	-		TX73_011425	0.69	-0.3
2,498,264	+		TX73_011425	0.70	+0.1
2,498,269	+		TX73_011425	0.70	+0.5
2,498,272	-		TX73_011425	0.70	-0.2
2,498,272	-		TX73_011425	0.70	+1.6
2,498,277	-		TX73_011425	0.71	-0.8
2,498,284	+		TX73_011425	0.71	-1.8
2,498,334	+		TX73_011425	0.72	-0.2
2,498,344	+		TX73_011425	0.73	-0.0
2,498,354	-		TX73_011425	0.73	+0.3
2,498,359	-		TX73_011425	0.73	+0.0
2,498,372	+		TX73_011425	0.73	+0.4
2,498,397	+		TX73_011425	0.74	-0.3
2,498,405	-		TX73_011425	0.74	-0.7
2,498,442	+		TX73_011425	0.76	+0.1
2,498,450	+		TX73_011425	0.76	+1.2
2,498,458	-		TX73_011425	0.76	-0.9
2,498,474	-		TX73_011425	0.77	+1.3
2,498,499	-		TX73_011425	0.77	-0.3
2,498,528	+		TX73_011425	0.78	-0.5
2,498,545	-		TX73_011425	0.79	-1.2
2,498,545	-		TX73_011425	0.79	-1.7
2,498,550	-		TX73_011425	0.79	-0.0
2,498,563	-		TX73_011425	0.79	+0.9
2,498,580	-		TX73_011425	0.80	-0.5
2,498,618	-		TX73_011425	0.81	-0.2
2,498,662	+		TX73_011425	0.82	-2.6
2,498,674	+		TX73_011425	0.83	-0.3
2,498,682	-		TX73_011425	0.83	-0.5
2,498,682	-		TX73_011425	0.83	+0.4
2,498,696	-		TX73_011425	0.83	-1.3
2,498,743	+		TX73_011425	0.85	-1.4
2,498,747	+		TX73_011425	0.85	+0.6
2,498,751	-		TX73_011425	0.85	-0.4
2,498,760	-		TX73_011425	0.85	+2.0
2,498,774	+		TX73_011425	0.86	-0.7
2,498,822	+		TX73_011425	0.87	-0.3
2,498,822	+		TX73_011425	0.87	-4.2
2,498,830	-		TX73_011425	0.87	-0.3
2,498,846	+		TX73_011425	0.88	-0.8
2,498,846	+		TX73_011425	0.88	-0.2
2,498,846	+		TX73_011425	0.88	+0.0
2,498,854	-		TX73_011425	0.88	-0.0
2,498,854	-		TX73_011425	0.88	-2.2
2,498,854	-		TX73_011425	0.88	+0.4
2,498,865	+		TX73_011425	0.88	-0.7
2,498,869	+		TX73_011425	0.88	-0.6
2,498,870	+		TX73_011425	0.88	+0.0
2,498,877	-		TX73_011425	0.89	+0.6
2,498,878	-		TX73_011425	0.89	-0.4
2,498,878	-		TX73_011425	0.89	+0.1
2,498,882	-		TX73_011425	0.89	+0.7
2,498,884	+		TX73_011425	0.89	-1.6
2,498,891	-		TX73_011425	0.89	-0.5
2,498,891	-		TX73_011425	0.89	+1.1
2,498,914	-		TX73_011425	0.90	-0.7
2,498,914	-		TX73_011425	0.90	+0.1
2,498,925	-				-1.1
2,498,927	+				-0.5
2,498,955	+				+0.5
2,498,956	+				+0.3
2,498,963	-				-0.0
2,498,963	-				-1.0
2,499,062	+				-1.7
2,499,070	-				+1.4
2,499,070	-				+0.0
2,499,070	-				-1.6
2,499,095	+				-0.9
2,499,103	-				+0.2
2,499,103	-				-1.3
2,499,103	-				-0.1
2,499,110	+				-1.4
2,499,111	+				-0.2
2,499,113	-				-0.4
2,499,145	+				-0.8
2,499,148	-				+0.2
2,499,148	-				-1.4
2,499,158	-				+0.9
2,499,158	-				-0.9
2,499,158	-				-1.6
2,499,158	-				-1.5
2,499,158	-				+0.3
2,499,174	+				+0.8
2,499,189	-				+0.3
2,499,189	-				+0.6
2,499,201	-				-0.3
2,499,208	-				-1.0
2,499,218	-				+0.3
2,499,265	+				+0.6
2,499,270	+				-0.2
2,499,273	-				-1.2
2,499,304	-				-0.2
2,499,304	-				-0.9
2,499,324	-				+0.2
2,499,324	-				+0.4
2,499,324	-				-0.0
2,499,326	+				-0.2
2,499,326	+				+0.6
2,499,329	-				+0.5
2,499,334	-				-2.7
2,499,334	-				+0.4
2,499,334	-				-0.1
2,499,334	-				-0.4
2,499,347	-				+0.9
2,499,356	+				+0.4
2,499,360	-				+0.7
2,499,377	+				-0.1
2,499,392	-				+1.8
2,499,420	+				-0.8
2,499,421	-				-0.5
2,499,476	-				-0.0
2,499,528	+				-0.2
2,499,536	-				-0.3
2,499,536	-				+1.2
2,499,536	-				+0.6
2,499,541	-				-0.4
2,499,551	+				-0.4
2,499,565	+				-1.2
2,499,571	-				+0.4
2,499,578	+				-0.9
2,499,586	-				+0.2
2,499,595	+				-0.4
2,499,596	+				-0.7
2,499,596	+				-1.3
2,499,645	+		TX73_011430	0.11	-2.2
2,499,652	-		TX73_011430	0.11	-0.9
2,499,657	-		TX73_011430	0.11	+1.6
2,499,672	+		TX73_011430	0.12	-0.2
2,499,689	-		TX73_011430	0.12	+0.2
2,499,730	+		TX73_011430	0.13	+0.8
2,499,740	+		TX73_011430	0.14	-1.7
2,499,759	+		TX73_011430	0.14	-1.6
2,499,759	+		TX73_011430	0.14	-1.3
2,499,760	+		TX73_011430	0.14	-0.3
2,499,769	-		TX73_011430	0.14	-2.6
2,499,781	+		TX73_011430	0.15	-0.3
2,499,781	+		TX73_011430	0.15	+0.1
2,499,781	+		TX73_011430	0.15	+0.2
2,499,781	+		TX73_011430	0.15	+0.4
2,499,781	+		TX73_011430	0.15	-0.6
2,499,781	+		TX73_011430	0.15	-1.7
2,499,788	+		TX73_011430	0.15	-1.8
2,499,789	-		TX73_011430	0.15	-0.2
2,499,789	-		TX73_011430	0.15	+0.4
2,499,789	-		TX73_011430	0.15	-1.4
2,499,794	-		TX73_011430	0.15	+0.0
2,499,801	+		TX73_011430	0.15	-0.6
2,499,826	+		TX73_011430	0.16	-0.1
2,499,844	-		TX73_011430	0.17	+0.1
2,499,844	-		TX73_011430	0.17	-0.6
2,499,860	-		TX73_011430	0.17	-0.3
2,499,867	-		TX73_011430	0.17	-0.2
2,499,902	+		TX73_011430	0.18	-0.2
2,499,902	+		TX73_011430	0.18	+0.7
2,499,902	+		TX73_011430	0.18	-1.0
2,499,910	-		TX73_011430	0.19	-0.0
2,499,992	+		TX73_011430	0.21	-0.5
2,500,023	+		TX73_011430	0.22	+0.6
2,500,084	-		TX73_011430	0.24	+0.1
2,500,108	+		TX73_011430	0.24	-0.7
2,500,116	-		TX73_011430	0.25	+0.2
2,500,116	-		TX73_011430	0.25	-0.2
2,500,116	-		TX73_011430	0.25	-0.4
2,500,124	-		TX73_011430	0.25	-1.3
2,500,204	-		TX73_011430	0.27	-0.0
2,500,206	-		TX73_011430	0.27	+0.5
2,500,206	-		TX73_011430	0.27	+0.1
2,500,224	+		TX73_011430	0.28	-1.6
2,500,225	-		TX73_011430	0.28	-0.9