Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_011330

Experiment: PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
2,470,484	-		TX73_011325	0.11	-0.5
2,470,486	+		TX73_011325	0.11	+1.5
2,470,486	+		TX73_011325	0.11	+0.8
2,470,494	-		TX73_011325	0.12	-0.6
2,470,494	-		TX73_011325	0.12	+0.6
2,470,494	-		TX73_011325	0.12	+0.2
2,470,495	-		TX73_011325	0.12	-0.6
2,470,502	-		TX73_011325	0.12	-2.1
2,470,518	+		TX73_011325	0.14	-0.4
2,470,538	-		TX73_011325	0.16	+1.2
2,470,538	-		TX73_011325	0.16	+0.7
2,470,545	-		TX73_011325	0.16	+2.5
2,470,552	-		TX73_011325	0.17	-0.1
2,470,593	-		TX73_011325	0.21	+0.2
2,470,601	+		TX73_011325	0.22	-0.6
2,470,601	+		TX73_011325	0.22	+1.1
2,470,601	+		TX73_011325	0.22	-0.3
2,470,611	+		TX73_011325	0.23	-0.3
2,470,611	+		TX73_011325	0.23	-0.9
2,470,632	-		TX73_011325	0.25	-1.1
2,470,666	-		TX73_011325	0.28	+0.3
2,470,668	+		TX73_011325	0.28	-1.2
2,470,700	-		TX73_011325	0.31	+0.6
2,470,764	+		TX73_011325	0.37	+0.1
2,470,794	-		TX73_011325	0.40	-0.4
2,470,829	+		TX73_011325	0.43	-1.0
2,470,842	-		TX73_011325	0.44	-0.8
2,470,872	-		TX73_011325	0.47	-0.4
2,470,877	-		TX73_011325	0.48	-0.4
2,470,889	+		TX73_011325	0.49	-1.4
2,470,907	-		TX73_011325	0.50	+1.2
2,470,907	-		TX73_011325	0.50	-0.6
2,470,916	+		TX73_011325	0.51	+1.0
2,470,918	+		TX73_011325	0.51	-0.3
2,470,926	-		TX73_011325	0.52	+0.8
2,470,994	-		TX73_011325	0.59	-0.9
2,471,022	+		TX73_011325	0.61	+1.8
2,471,030	+		TX73_011325	0.62	-0.8
2,471,030	-		TX73_011325	0.62	+0.1
2,471,032	-		TX73_011325	0.62	-0.6
2,471,059	-		TX73_011325	0.65	-0.3
2,471,065	-		TX73_011325	0.65	-1.1
2,471,079	+		TX73_011325	0.66	-1.4
2,471,079	+		TX73_011325	0.66	+0.7
2,471,079	+		TX73_011325	0.66	-2.5
2,471,089	+		TX73_011325	0.67	+0.8
2,471,109	+		TX73_011325	0.69	-2.0
2,471,109	+		TX73_011325	0.69	-3.3
2,471,117	+		TX73_011325	0.70	-0.5
2,471,142	-		TX73_011325	0.72	-0.8
2,471,150	+		TX73_011325	0.73	-0.0
2,471,150	+		TX73_011325	0.73	+0.7
2,471,150	+		TX73_011325	0.73	-0.2
2,471,152	-		TX73_011325	0.73	-0.1
2,471,158	-		TX73_011325	0.74	+0.1
2,471,158	-		TX73_011325	0.74	-0.3
2,471,158	-		TX73_011325	0.74	+1.1
2,471,158	-		TX73_011325	0.74	-0.8
2,471,165	+		TX73_011325	0.75	-0.4
2,471,191	+		TX73_011325	0.77	-2.0
2,471,191	+		TX73_011325	0.77	-0.6
2,471,199	-		TX73_011325	0.78	+0.3
2,471,206	+		TX73_011325	0.78	+1.0
2,471,211	+		TX73_011325	0.79	-0.5
2,471,212	-		TX73_011325	0.79	-1.2
2,471,214	+		TX73_011325	0.79	-0.1
2,471,240	+		TX73_011325	0.82	-2.1
2,471,254	-		TX73_011325	0.83	+1.0
2,471,254	-		TX73_011325	0.83	+0.9
2,471,261	+		TX73_011325	0.84	+0.2
2,471,269	-		TX73_011325	0.84	-0.0
2,471,269	-		TX73_011325	0.84	-0.3
2,471,293	+		TX73_011325	0.87	+0.5
2,471,293	+		TX73_011325	0.87	-1.5
2,471,293	+		TX73_011325	0.87	-2.3
2,471,301	-		TX73_011325	0.87	-0.6
2,471,301	-		TX73_011325	0.87	+1.1
2,471,327	-		TX73_011325	0.90	-0.5
2,471,336	-				-1.6
2,471,379	+				+0.8
2,471,385	+				-0.3
2,471,394	-				+0.6
2,471,431	+				+1.4
2,471,431	+				+0.4
2,471,431	+				-0.4
2,471,431	+				-1.8
2,471,438	-				+0.4
2,471,438	-				-1.5
2,471,439	-				+1.7
2,471,439	-				-0.4
2,471,439	-				-0.0
2,471,439	-				-0.0
2,471,439	-				-0.5
2,471,439	-				+0.8
2,471,470	+				-1.1
2,471,470	+				-0.6
2,471,520	-				+0.1
2,471,581	-		TX73_011330	0.20	-0.2
2,471,593	+		TX73_011330	0.23	-2.8
2,471,593	+		TX73_011330	0.23	+0.1
2,471,593	+		TX73_011330	0.23	-0.9
2,471,593	+		TX73_011330	0.23	+0.6
2,471,623	+		TX73_011330	0.28	+1.1
2,471,624	-		TX73_011330	0.28	+0.6
2,471,665	+		TX73_011330	0.35	+0.2
2,471,745	-		TX73_011330	0.49	-0.1
2,471,758	-		TX73_011330	0.51	-1.0
2,471,764	-		TX73_011330	0.52	-1.2
2,471,769	-		TX73_011330	0.53	-0.3
2,471,778	+		TX73_011330	0.55	-1.0
2,471,781	-		TX73_011330	0.55	+0.0
2,471,826	-		TX73_011330	0.63	-1.5
2,471,870	+		TX73_011330	0.71	+0.6
2,471,878	-		TX73_011330	0.72	-1.2
2,471,880	+		TX73_011330	0.72	-0.9
2,471,880	+		TX73_011330	0.72	-0.5
2,471,880	+		TX73_011330	0.72	-0.6
2,471,880	+		TX73_011330	0.72	-1.0
2,471,885	+		TX73_011330	0.73	-0.6
2,471,888	-		TX73_011330	0.74	+0.0
2,471,899	+		TX73_011330	0.76	-0.4
2,471,941	+		TX73_011330	0.83	-1.0
2,471,941	+		TX73_011330	0.83	-0.7
2,471,941	+		TX73_011330	0.83	-1.0
2,471,941	+		TX73_011330	0.83	+0.8
2,471,949	-		TX73_011330	0.84	-0.7
2,471,949	-		TX73_011330	0.84	-0.6
2,471,954	-		TX73_011330	0.85	+1.3
2,471,982	-				-0.3
2,471,984	+				+0.0
2,471,992	-				-1.4
2,471,992	-				-0.8
2,472,048	+				+0.4
2,472,048	-				-1.5
2,472,048	-				-0.9
2,472,048	-				-0.1
2,472,048	-				-1.1
2,472,056	-				+0.0
2,472,057	-				-0.3
2,472,071	-				-0.2
2,472,106	-				+0.8
2,472,112	+				+0.9
2,472,138	-				-0.2
2,472,195	+				-0.1
2,472,205	-				-0.6
2,472,210	-				-0.7
2,472,216	+				-0.7
2,472,216	-				-0.5
2,472,222	-				-0.7
2,472,239	+				+0.2
2,472,247	-				+0.4
2,472,247	-				+0.2
2,472,247	-				-1.2
2,472,252	-				+0.5
2,472,252	-				+0.6
2,472,252	-				-0.3
2,472,257	-				+0.1
2,472,307	+				+0.6
2,472,310	+		TX73_011335	0.10	+2.8
2,472,325	+		TX73_011335	0.12	-0.7
2,472,344	+		TX73_011335	0.15	+0.8
2,472,349	+		TX73_011335	0.16	-0.5
2,472,349	+		TX73_011335	0.16	-0.6
2,472,349	+		TX73_011335	0.16	-1.3
2,472,349	+		TX73_011335	0.16	-0.7
2,472,349	+		TX73_011335	0.16	-0.3
2,472,349	+		TX73_011335	0.16	+0.1
2,472,349	+		TX73_011335	0.16	-1.4
2,472,357	-		TX73_011335	0.17	-0.1
2,472,357	-		TX73_011335	0.17	+0.8
2,472,357	-		TX73_011335	0.17	+0.4
2,472,380	+		TX73_011335	0.20	-0.9
2,472,380	+		TX73_011335	0.20	+0.0
2,472,388	-		TX73_011335	0.21	-0.4
2,472,388	-		TX73_011335	0.21	+0.1
2,472,389	-		TX73_011335	0.21	-0.4
2,472,389	-		TX73_011335	0.21	+1.2
2,472,399	-		TX73_011335	0.23	+1.0
2,472,426	-		TX73_011335	0.27	+0.5
2,472,445	-		TX73_011335	0.29	+1.0
2,472,453	-		TX73_011335	0.30	+0.8
2,472,498	+		TX73_011335	0.37	+0.2
2,472,500	+		TX73_011335	0.37	+0.4
2,472,517	+		TX73_011335	0.39	+0.9
2,472,571	-		TX73_011335	0.47	+0.8
2,472,596	+		TX73_011335	0.50	+0.2
2,472,596	+		TX73_011335	0.50	-1.4
2,472,597	+		TX73_011335	0.51	+0.4
2,472,605	-		TX73_011335	0.52	-0.1
2,472,625	-		TX73_011335	0.54	+0.2
2,472,664	+		TX73_011335	0.60	-2.0
2,472,664	+		TX73_011335	0.60	-2.2
2,472,674	-		TX73_011335	0.61	-1.4
2,472,674	-		TX73_011335	0.61	-0.1
2,472,676	+		TX73_011335	0.62	-0.0
2,472,676	+		TX73_011335	0.62	-0.8
2,472,676	+		TX73_011335	0.62	-0.6
2,472,676	+		TX73_011335	0.62	+0.1
2,472,681	+		TX73_011335	0.62	-0.5
2,472,684	-		TX73_011335	0.63	+0.0
2,472,684	-		TX73_011335	0.63	+0.7
2,472,684	-		TX73_011335	0.63	-1.1
2,472,691	+		TX73_011335	0.64	-0.5
2,472,699	-		TX73_011335	0.65	+0.2
2,472,699	-		TX73_011335	0.65	+0.9
2,472,699	-		TX73_011335	0.65	+0.2
2,472,705	+		TX73_011335	0.66	-2.0
2,472,705	+		TX73_011335	0.66	+0.2
2,472,710	+		TX73_011335	0.66	+0.0
2,472,713	-		TX73_011335	0.67	+1.0
2,472,717	-		TX73_011335	0.67	-0.3
2,472,775	+		TX73_011335	0.75	-0.0
2,472,799	+		TX73_011335	0.79	+1.4
2,472,841	+		TX73_011335	0.85	+0.8
2,472,849	-		TX73_011335	0.86	-1.8
2,472,849	-		TX73_011335	0.86	-0.5
2,472,865	+		TX73_011335	0.88	+0.7
2,472,865	+		TX73_011335	0.88	-3.5
2,472,882	+				+0.9
2,472,890	-				+0.0
2,472,897	-				-0.1
2,472,935	+				-0.3
2,472,957	+				+0.1
2,472,957	+				+0.4
2,472,957	+				+0.4
2,472,957	+				-0.3
2,472,957	+				-0.7
2,472,957	+				-1.6
2,472,957	+				-0.8
2,472,960	-				-1.5
2,472,965	-				-2.4
2,472,965	-				-0.4
2,472,965	-				-0.1
2,472,975	-				-0.3
2,472,995	+				-0.9