Experiment: PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt TX73_024645 and TX73_024650 are separated by 95 nucleotides TX73_024650 and TX73_024655 are separated by 155 nucleotides TX73_024655 and TX73_024660 are separated by 96 nucleotides
TX73_024645: TX73_024645 - argininosuccinate lyase, at 5,354,943 to 5,356,340
_024645
TX73_024650: TX73_024650 - TlpA disulfide reductase family protein, at 5,356,436 to 5,357,122
_024650
TX73_024655: TX73_024655 - hypothetical protein, at 5,357,278 to 5,357,478
_024655
TX73_024660: TX73_024660 - NAD(P)H-dependent oxidoreductase, at 5,357,575 to 5,358,375
_024660
Position (kb) 5356
5357
5358 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 5356.377 kb on + strand at 5356.377 kb on + strand at 5356.377 kb on + strand at 5356.380 kb on - strand at 5356.398 kb on + strand at 5356.450 kb on + strand at 5356.471 kb on - strand at 5356.493 kb on - strand at 5356.493 kb on - strand at 5356.536 kb on + strand, within TX73_024650 at 5356.553 kb on - strand, within TX73_024650 at 5356.615 kb on + strand, within TX73_024650 at 5356.682 kb on + strand, within TX73_024650 at 5356.757 kb on - strand, within TX73_024650 at 5357.000 kb on + strand, within TX73_024650 at 5357.003 kb on - strand, within TX73_024650 at 5357.003 kb on - strand, within TX73_024650 at 5357.080 kb on + strand at 5357.080 kb on + strand at 5357.080 kb on + strand at 5357.080 kb on + strand at 5357.080 kb on + strand at 5357.080 kb on + strand at 5357.088 kb on - strand at 5357.088 kb on - strand at 5357.088 kb on - strand at 5357.088 kb on - strand at 5357.088 kb on - strand at 5357.088 kb on - strand at 5357.150 kb on - strand at 5357.167 kb on - strand at 5357.182 kb on + strand at 5357.261 kb on + strand at 5357.261 kb on + strand at 5357.261 kb on + strand at 5357.263 kb on + strand at 5357.263 kb on + strand at 5357.269 kb on - strand at 5357.269 kb on - strand at 5357.269 kb on - strand at 5357.287 kb on + strand at 5357.315 kb on - strand, within TX73_024655 at 5357.326 kb on - strand, within TX73_024655 at 5357.341 kb on + strand, within TX73_024655 at 5357.341 kb on + strand, within TX73_024655 at 5357.344 kb on - strand, within TX73_024655 at 5357.346 kb on + strand, within TX73_024655 at 5357.346 kb on + strand, within TX73_024655 at 5357.349 kb on - strand, within TX73_024655 at 5357.353 kb on + strand, within TX73_024655 at 5357.354 kb on - strand, within TX73_024655 at 5357.354 kb on - strand, within TX73_024655 at 5357.354 kb on - strand, within TX73_024655 at 5357.354 kb on - strand, within TX73_024655 at 5357.359 kb on - strand, within TX73_024655 at 5357.361 kb on + strand, within TX73_024655 at 5357.362 kb on + strand, within TX73_024655 at 5357.370 kb on - strand, within TX73_024655 at 5357.370 kb on - strand, within TX73_024655 at 5357.372 kb on + strand, within TX73_024655 at 5357.378 kb on + strand, within TX73_024655 at 5357.380 kb on - strand, within TX73_024655 at 5357.380 kb on - strand, within TX73_024655 at 5357.406 kb on - strand, within TX73_024655 at 5357.417 kb on + strand, within TX73_024655 at 5357.440 kb on - strand, within TX73_024655 at 5357.440 kb on - strand, within TX73_024655 at 5357.445 kb on - strand, within TX73_024655 at 5357.461 kb on + strand at 5357.469 kb on - strand at 5357.469 kb on - strand at 5357.469 kb on - strand at 5357.486 kb on + strand at 5357.568 kb on + strand at 5357.576 kb on - strand at 5357.592 kb on - strand at 5357.594 kb on + strand at 5357.610 kb on - strand at 5357.617 kb on + strand at 5357.617 kb on + strand at 5357.625 kb on - strand at 5357.652 kb on + strand at 5357.660 kb on - strand, within TX73_024660 at 5357.672 kb on - strand, within TX73_024660 at 5357.691 kb on - strand, within TX73_024660 at 5357.719 kb on - strand, within TX73_024660 at 5357.740 kb on + strand, within TX73_024660 at 5357.756 kb on + strand, within TX73_024660 at 5357.786 kb on + strand, within TX73_024660 at 5357.794 kb on - strand, within TX73_024660 at 5357.806 kb on - strand, within TX73_024660 at 5357.814 kb on - strand, within TX73_024660 at 5357.825 kb on + strand, within TX73_024660 at 5357.833 kb on - strand, within TX73_024660 at 5357.838 kb on - strand, within TX73_024660 at 5357.838 kb on - strand, within TX73_024660 at 5357.852 kb on + strand, within TX73_024660 at 5357.852 kb on + strand, within TX73_024660 at 5357.885 kb on - strand, within TX73_024660 at 5357.894 kb on + strand, within TX73_024660 at 5357.894 kb on + strand, within TX73_024660 at 5357.899 kb on + strand, within TX73_024660 at 5357.899 kb on + strand, within TX73_024660 at 5357.899 kb on + strand, within TX73_024660 at 5357.902 kb on - strand, within TX73_024660 at 5357.904 kb on + strand, within TX73_024660 at 5357.912 kb on - strand, within TX73_024660 at 5357.919 kb on - strand, within TX73_024660 at 5357.926 kb on + strand, within TX73_024660 at 5357.956 kb on + strand, within TX73_024660 at 5357.992 kb on - strand, within TX73_024660 at 5357.995 kb on - strand, within TX73_024660 at 5358.013 kb on - strand, within TX73_024660 at 5358.017 kb on + strand, within TX73_024660 at 5358.022 kb on + strand, within TX73_024660 at 5358.038 kb on + strand, within TX73_024660 at 5358.038 kb on + strand, within TX73_024660 at 5358.041 kb on - strand, within TX73_024660 at 5358.046 kb on + strand, within TX73_024660 at 5358.046 kb on + strand, within TX73_024660 at 5358.054 kb on - strand, within TX73_024660 at 5358.057 kb on + strand, within TX73_024660 at 5358.104 kb on + strand, within TX73_024660 at 5358.112 kb on - strand, within TX73_024660
Per-strain Table
Position Strand Gene LocusTag Fraction PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM remove 5,356,377 + +0.3 5,356,377 + -0.3 5,356,377 + -0.1 5,356,380 - +0.1 5,356,398 + +0.3 5,356,450 + +0.6 5,356,471 - -1.7 5,356,493 - +0.6 5,356,493 - +1.3 5,356,536 + TX73_024650 0.15 +0.1 5,356,553 - TX73_024650 0.17 -0.1 5,356,615 + TX73_024650 0.26 +0.3 5,356,682 + TX73_024650 0.36 +1.3 5,356,757 - TX73_024650 0.47 +0.6 5,357,000 + TX73_024650 0.82 -0.1 5,357,003 - TX73_024650 0.83 +1.3 5,357,003 - TX73_024650 0.83 +1.9 5,357,080 + -2.1 5,357,080 + -2.0 5,357,080 + -2.1 5,357,080 + -2.3 5,357,080 + -2.3 5,357,080 + -4.3 5,357,088 - -0.8 5,357,088 - -2.0 5,357,088 - -3.0 5,357,088 - -1.7 5,357,088 - -2.3 5,357,088 - -2.5 5,357,150 - -0.3 5,357,167 - -0.4 5,357,182 + +0.1 5,357,261 + -0.8 5,357,261 + -0.3 5,357,261 + -0.3 5,357,263 + -0.3 5,357,263 + -0.1 5,357,269 - -0.7 5,357,269 - +0.1 5,357,269 - +0.2 5,357,287 + +0.4 5,357,315 - TX73_024655 0.18 +0.4 5,357,326 - TX73_024655 0.24 -0.1 5,357,341 + TX73_024655 0.31 -0.5 5,357,341 + TX73_024655 0.31 -0.0 5,357,344 - TX73_024655 0.33 +0.1 5,357,346 + TX73_024655 0.34 +0.1 5,357,346 + TX73_024655 0.34 +0.6 5,357,349 - TX73_024655 0.35 +0.1 5,357,353 + TX73_024655 0.37 +0.2 5,357,354 - TX73_024655 0.38 -0.8 5,357,354 - TX73_024655 0.38 -0.0 5,357,354 - TX73_024655 0.38 +0.7 5,357,354 - TX73_024655 0.38 +0.2 5,357,359 - TX73_024655 0.40 +0.2 5,357,361 + TX73_024655 0.41 -0.0 5,357,362 + TX73_024655 0.42 +0.6 5,357,370 - TX73_024655 0.46 +0.9 5,357,370 - TX73_024655 0.46 -0.2 5,357,372 + TX73_024655 0.47 -0.6 5,357,378 + TX73_024655 0.50 -0.7 5,357,380 - TX73_024655 0.51 +0.0 5,357,380 - TX73_024655 0.51 +0.1 5,357,406 - TX73_024655 0.64 -1.4 5,357,417 + TX73_024655 0.69 +1.2 5,357,440 - TX73_024655 0.81 -0.5 5,357,440 - TX73_024655 0.81 +0.0 5,357,445 - TX73_024655 0.83 -0.1 5,357,461 + -0.1 5,357,469 - -0.2 5,357,469 - +0.1 5,357,469 - -0.6 5,357,486 + +0.0 5,357,568 + -0.4 5,357,576 - -0.9 5,357,592 - +0.1 5,357,594 + +0.4 5,357,610 - -0.4 5,357,617 + +0.1 5,357,617 + -0.2 5,357,625 - +0.2 5,357,652 + +0.3 5,357,660 - TX73_024660 0.11 +0.1 5,357,672 - TX73_024660 0.12 -1.9 5,357,691 - TX73_024660 0.14 -0.5 5,357,719 - TX73_024660 0.18 +0.6 5,357,740 + TX73_024660 0.21 -0.0 5,357,756 + TX73_024660 0.23 +0.2 5,357,786 + TX73_024660 0.26 -0.9 5,357,794 - TX73_024660 0.27 -0.3 5,357,806 - TX73_024660 0.29 +0.5 5,357,814 - TX73_024660 0.30 -0.7 5,357,825 + TX73_024660 0.31 -0.4 5,357,833 - TX73_024660 0.32 -0.3 5,357,838 - TX73_024660 0.33 +0.5 5,357,838 - TX73_024660 0.33 +0.4 5,357,852 + TX73_024660 0.35 +0.4 5,357,852 + TX73_024660 0.35 -0.7 5,357,885 - TX73_024660 0.39 +0.7 5,357,894 + TX73_024660 0.40 -0.4 5,357,894 + TX73_024660 0.40 -0.6 5,357,899 + TX73_024660 0.40 -0.1 5,357,899 + TX73_024660 0.40 -0.3 5,357,899 + TX73_024660 0.40 -1.0 5,357,902 - TX73_024660 0.41 +0.3 5,357,904 + TX73_024660 0.41 -0.2 5,357,912 - TX73_024660 0.42 +0.1 5,357,919 - TX73_024660 0.43 +0.2 5,357,926 + TX73_024660 0.44 +0.0 5,357,956 + TX73_024660 0.48 +0.2 5,357,992 - TX73_024660 0.52 -0.4 5,357,995 - TX73_024660 0.52 -0.2 5,358,013 - TX73_024660 0.55 -0.4 5,358,017 + TX73_024660 0.55 -0.3 5,358,022 + TX73_024660 0.56 -1.1 5,358,038 + TX73_024660 0.58 -1.4 5,358,038 + TX73_024660 0.58 +0.4 5,358,041 - TX73_024660 0.58 -0.8 5,358,046 + TX73_024660 0.59 -0.2 5,358,046 + TX73_024660 0.59 +0.1 5,358,054 - TX73_024660 0.60 -0.4 5,358,057 + TX73_024660 0.60 +0.1 5,358,104 + TX73_024660 0.66 +0.3 5,358,112 - TX73_024660 0.67 +1.3
Or see this region's nucleotide sequence