Experiment: PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt TX73_013740 and TX73_013745 are separated by 25 nucleotides TX73_013745 and TX73_013750 are separated by 359 nucleotides TX73_013750 and TX73_013755 are separated by 155 nucleotides TX73_013755 and TX73_013760 are separated by 187 nucleotides
TX73_013740: TX73_013740 - light-harvesting protein, at 3,017,746 to 3,017,925
_013740
TX73_013745: TX73_013745 - light-harvesting antenna LH1, beta subunit, at 3,017,951 to 3,018,094
_013745
TX73_013750: TX73_013750 - tRNA-Lys, at 3,018,454 to 3,018,529
_013750
TX73_013755: TX73_013755 - glycosyltransferase, at 3,018,685 to 3,021,519
_013755
TX73_013760: TX73_013760 - beta-1-3, beta-1-6-glucan biosynthesis protein, at 3,021,707 to 3,022,285
_013760
Position (kb)
3018
3019
3020
3021
3022 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3017.734 kb on - strand at 3017.737 kb on - strand at 3017.739 kb on + strand at 3017.747 kb on - strand at 3017.747 kb on - strand at 3017.821 kb on - strand, within TX73_013740 at 3017.861 kb on + strand, within TX73_013740 at 3017.861 kb on - strand, within TX73_013740 at 3017.889 kb on - strand, within TX73_013740 at 3017.911 kb on - strand at 3017.911 kb on - strand at 3017.929 kb on + strand at 3017.931 kb on + strand at 3017.936 kb on + strand at 3017.936 kb on + strand at 3017.936 kb on + strand at 3017.944 kb on + strand at 3017.944 kb on - strand at 3017.944 kb on - strand at 3017.944 kb on - strand at 3017.946 kb on + strand at 3017.963 kb on + strand at 3017.967 kb on - strand, within TX73_013745 at 3017.979 kb on + strand, within TX73_013745 at 3017.987 kb on - strand, within TX73_013745 at 3018.039 kb on + strand, within TX73_013745 at 3018.049 kb on + strand, within TX73_013745 at 3018.057 kb on - strand, within TX73_013745 at 3018.057 kb on - strand, within TX73_013745 at 3018.057 kb on - strand, within TX73_013745 at 3018.064 kb on - strand, within TX73_013745 at 3018.064 kb on - strand, within TX73_013745 at 3018.066 kb on - strand, within TX73_013745 at 3018.133 kb on - strand at 3018.133 kb on - strand at 3018.151 kb on - strand at 3018.160 kb on + strand at 3018.172 kb on + strand at 3018.179 kb on + strand at 3018.263 kb on + strand at 3018.271 kb on - strand at 3018.271 kb on - strand at 3018.276 kb on - strand at 3018.303 kb on - strand at 3018.303 kb on - strand at 3018.342 kb on + strand at 3018.342 kb on + strand at 3018.342 kb on + strand at 3018.350 kb on - strand at 3018.350 kb on - strand at 3018.379 kb on - strand at 3018.397 kb on - strand at 3018.404 kb on - strand at 3018.409 kb on + strand at 3018.409 kb on + strand at 3018.409 kb on + strand at 3018.409 kb on + strand at 3018.409 kb on + strand at 3018.417 kb on - strand at 3018.436 kb on - strand at 3018.436 kb on - strand at 3018.458 kb on - strand at 3018.539 kb on + strand at 3018.550 kb on - strand at 3018.550 kb on - strand at 3018.552 kb on - strand at 3018.552 kb on - strand at 3018.552 kb on - strand at 3018.557 kb on - strand at 3018.679 kb on - strand at 3018.690 kb on - strand at 3018.702 kb on + strand at 3018.702 kb on + strand at 3018.713 kb on + strand at 3018.738 kb on - strand at 3018.749 kb on + strand at 3018.761 kb on - strand at 3021.538 kb on - strand at 3021.544 kb on - strand at 3021.554 kb on + strand at 3021.554 kb on + strand at 3021.562 kb on - strand at 3021.563 kb on - strand at 3021.580 kb on - strand at 3021.605 kb on + strand at 3021.617 kb on + strand at 3021.632 kb on - strand at 3021.642 kb on + strand at 3021.650 kb on - strand at 3021.650 kb on - strand at 3021.704 kb on + strand at 3021.742 kb on + strand at 3021.744 kb on + strand at 3021.828 kb on - strand, within TX73_013760 at 3022.300 kb on - strand at 3022.332 kb on + strand at 3022.340 kb on - strand at 3022.340 kb on - strand at 3022.364 kb on - strand at 3022.372 kb on - strand at 3022.419 kb on - strand at 3022.474 kb on - strand at 3022.478 kb on + strand at 3022.488 kb on + strand at 3022.493 kb on + strand at 3022.495 kb on + strand at 3022.501 kb on - strand at 3022.501 kb on - strand at 3022.503 kb on - strand at 3022.504 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM remove 3,017,734 - +0.1 3,017,737 - -0.4 3,017,739 + -0.2 3,017,747 - -0.0 3,017,747 - +1.2 3,017,821 - TX73_013740 0.42 +0.2 3,017,861 + TX73_013740 0.64 +1.3 3,017,861 - TX73_013740 0.64 +1.4 3,017,889 - TX73_013740 0.79 +0.4 3,017,911 - +0.9 3,017,911 - -2.6 3,017,929 + +0.8 3,017,931 + -0.6 3,017,936 + -0.4 3,017,936 + -0.7 3,017,936 + +0.1 3,017,944 + -0.6 3,017,944 - +0.4 3,017,944 - +0.3 3,017,944 - +0.6 3,017,946 + -0.8 3,017,963 + +0.5 3,017,967 - TX73_013745 0.11 +0.4 3,017,979 + TX73_013745 0.19 -1.8 3,017,987 - TX73_013745 0.25 +1.2 3,018,039 + TX73_013745 0.61 +0.3 3,018,049 + TX73_013745 0.68 +0.2 3,018,057 - TX73_013745 0.74 +0.4 3,018,057 - TX73_013745 0.74 -0.3 3,018,057 - TX73_013745 0.74 +0.2 3,018,064 - TX73_013745 0.78 -0.1 3,018,064 - TX73_013745 0.78 -1.2 3,018,066 - TX73_013745 0.80 -0.2 3,018,133 - -0.0 3,018,133 - +0.5 3,018,151 - +0.3 3,018,160 + +0.1 3,018,172 + -0.1 3,018,179 + +0.3 3,018,263 + +0.4 3,018,271 - -1.6 3,018,271 - +0.4 3,018,276 - -0.3 3,018,303 - +0.0 3,018,303 - +0.8 3,018,342 + -0.1 3,018,342 + +0.2 3,018,342 + -0.5 3,018,350 - +0.5 3,018,350 - -0.2 3,018,379 - +0.2 3,018,397 - +0.5 3,018,404 - +0.3 3,018,409 + -1.4 3,018,409 + +0.3 3,018,409 + +0.3 3,018,409 + -0.2 3,018,409 + -0.7 3,018,417 - -0.4 3,018,436 - +0.3 3,018,436 - +0.6 3,018,458 - +0.3 3,018,539 + +0.4 3,018,550 - +0.3 3,018,550 - -0.1 3,018,552 - +1.2 3,018,552 - +0.2 3,018,552 - +0.4 3,018,557 - +0.4 3,018,679 - +0.1 3,018,690 - +0.8 3,018,702 + +0.5 3,018,702 + -0.4 3,018,713 + -0.5 3,018,738 - +0.6 3,018,749 + +0.4 3,018,761 - +0.2 3,021,538 - +0.2 3,021,544 - +0.2 3,021,554 + +0.4 3,021,554 + -0.2 3,021,562 - +1.0 3,021,563 - +1.8 3,021,580 - +0.1 3,021,605 + +0.5 3,021,617 + +0.8 3,021,632 - -0.1 3,021,642 + +1.2 3,021,650 - +0.4 3,021,650 - -0.6 3,021,704 + +0.4 3,021,742 + +0.8 3,021,744 + -0.4 3,021,828 - TX73_013760 0.21 -1.3 3,022,300 - +1.1 3,022,332 + +0.7 3,022,340 - +0.8 3,022,340 - +0.3 3,022,364 - +0.7 3,022,372 - +0.0 3,022,419 - +0.0 3,022,474 - +0.4 3,022,478 + -0.1 3,022,488 + -0.1 3,022,493 + +0.3 3,022,495 + -0.4 3,022,501 - -0.1 3,022,501 - -0.9 3,022,503 - -0.8 3,022,504 + +1.7
Or see this region's nucleotide sequence