Experiment: PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt TX73_009860 and TX73_009865 are separated by 2 nucleotides TX73_009865 and TX73_009870 are separated by 111 nucleotides TX73_009870 and TX73_009875 are separated by 15 nucleotides
TX73_009860: TX73_009860 - glycoside hydrolase family 19 protein, at 2,146,544 to 2,147,305
_009860
TX73_009865: TX73_009865 - 3TM-type holin, at 2,147,308 to 2,147,880
_009865
TX73_009870: TX73_009870 - response regulator transcription factor, at 2,147,992 to 2,148,666
_009870
TX73_009875: TX73_009875 - sensor histidine kinase, at 2,148,682 to 2,150,073
_009875
Position (kb)
2147
2148
2149 Strain fitness (log2 ratio)
-2
-1
0
1 at 2146.998 kb on - strand, within TX73_009860 at 2147.007 kb on + strand, within TX73_009860 at 2147.009 kb on + strand, within TX73_009860 at 2147.056 kb on - strand, within TX73_009860 at 2147.090 kb on - strand, within TX73_009860 at 2147.153 kb on - strand, within TX73_009860 at 2147.225 kb on - strand, within TX73_009860 at 2147.272 kb on - strand at 2147.288 kb on + strand at 2147.310 kb on + strand at 2147.310 kb on + strand at 2147.318 kb on - strand at 2147.319 kb on - strand at 2147.358 kb on + strand at 2147.359 kb on - strand at 2147.366 kb on - strand, within TX73_009865 at 2147.382 kb on + strand, within TX73_009865 at 2147.412 kb on - strand, within TX73_009865 at 2147.412 kb on - strand, within TX73_009865 at 2147.438 kb on + strand, within TX73_009865 at 2147.438 kb on + strand, within TX73_009865 at 2147.446 kb on - strand, within TX73_009865 at 2147.461 kb on + strand, within TX73_009865 at 2147.461 kb on + strand, within TX73_009865 at 2147.463 kb on + strand, within TX73_009865 at 2147.482 kb on - strand, within TX73_009865 at 2147.507 kb on + strand, within TX73_009865 at 2147.508 kb on + strand, within TX73_009865 at 2147.536 kb on + strand, within TX73_009865 at 2147.554 kb on + strand, within TX73_009865 at 2147.576 kb on + strand, within TX73_009865 at 2147.584 kb on - strand, within TX73_009865 at 2147.602 kb on + strand, within TX73_009865 at 2147.668 kb on + strand, within TX73_009865 at 2147.668 kb on + strand, within TX73_009865 at 2147.676 kb on - strand, within TX73_009865 at 2147.676 kb on - strand, within TX73_009865 at 2147.707 kb on - strand, within TX73_009865 at 2147.774 kb on + strand, within TX73_009865 at 2147.782 kb on - strand, within TX73_009865 at 2147.829 kb on - strand at 2147.829 kb on - strand at 2147.829 kb on - strand at 2147.831 kb on + strand at 2147.831 kb on + strand at 2147.831 kb on + strand at 2147.834 kb on - strand at 2147.861 kb on - strand at 2147.903 kb on - strand at 2147.927 kb on + strand at 2148.026 kb on - strand at 2148.036 kb on + strand at 2148.044 kb on - strand at 2148.101 kb on - strand, within TX73_009870 at 2148.113 kb on + strand, within TX73_009870 at 2148.113 kb on + strand, within TX73_009870 at 2148.128 kb on + strand, within TX73_009870 at 2148.133 kb on + strand, within TX73_009870 at 2148.193 kb on + strand, within TX73_009870 at 2148.219 kb on + strand, within TX73_009870 at 2148.219 kb on + strand, within TX73_009870 at 2148.222 kb on - strand, within TX73_009870 at 2148.222 kb on - strand, within TX73_009870 at 2148.253 kb on + strand, within TX73_009870 at 2148.253 kb on + strand, within TX73_009870 at 2148.261 kb on - strand, within TX73_009870 at 2148.324 kb on + strand, within TX73_009870 at 2148.324 kb on + strand, within TX73_009870 at 2148.374 kb on + strand, within TX73_009870 at 2148.388 kb on - strand, within TX73_009870 at 2148.399 kb on - strand, within TX73_009870 at 2148.419 kb on - strand, within TX73_009870 at 2148.436 kb on - strand, within TX73_009870 at 2148.460 kb on - strand, within TX73_009870 at 2148.490 kb on - strand, within TX73_009870 at 2148.599 kb on - strand at 2148.606 kb on + strand at 2148.606 kb on + strand at 2148.606 kb on + strand at 2148.606 kb on + strand at 2148.606 kb on + strand at 2148.606 kb on + strand at 2148.606 kb on + strand at 2148.614 kb on - strand at 2148.614 kb on - strand at 2148.614 kb on - strand at 2148.614 kb on - strand at 2148.614 kb on - strand at 2148.614 kb on - strand at 2148.702 kb on + strand at 2148.719 kb on + strand at 2148.727 kb on - strand at 2148.754 kb on + strand at 2148.786 kb on + strand at 2148.786 kb on + strand at 2148.794 kb on - strand at 2148.794 kb on - strand at 2148.836 kb on + strand, within TX73_009875 at 2148.836 kb on + strand, within TX73_009875 at 2148.837 kb on + strand, within TX73_009875 at 2148.844 kb on - strand, within TX73_009875 at 2148.918 kb on + strand, within TX73_009875 at 2148.931 kb on - strand, within TX73_009875 at 2148.933 kb on + strand, within TX73_009875 at 2148.955 kb on + strand, within TX73_009875 at 2148.955 kb on - strand, within TX73_009875 at 2148.992 kb on + strand, within TX73_009875 at 2148.998 kb on + strand, within TX73_009875 at 2148.998 kb on - strand, within TX73_009875 at 2148.998 kb on - strand, within TX73_009875 at 2149.006 kb on - strand, within TX73_009875 at 2149.006 kb on - strand, within TX73_009875 at 2149.030 kb on + strand, within TX73_009875 at 2149.038 kb on - strand, within TX73_009875 at 2149.038 kb on - strand, within TX73_009875 at 2149.043 kb on + strand, within TX73_009875 at 2149.063 kb on + strand, within TX73_009875 at 2149.091 kb on + strand, within TX73_009875 at 2149.097 kb on - strand, within TX73_009875 at 2149.098 kb on - strand, within TX73_009875 at 2149.099 kb on - strand, within TX73_009875 at 2149.099 kb on - strand, within TX73_009875 at 2149.099 kb on - strand, within TX73_009875 at 2149.101 kb on + strand, within TX73_009875 at 2149.109 kb on - strand, within TX73_009875 at 2149.109 kb on - strand, within TX73_009875 at 2149.119 kb on + strand, within TX73_009875 at 2149.127 kb on - strand, within TX73_009875 at 2149.233 kb on + strand, within TX73_009875 at 2149.241 kb on + strand, within TX73_009875 at 2149.241 kb on + strand, within TX73_009875 at 2149.241 kb on + strand, within TX73_009875 at 2149.249 kb on - strand, within TX73_009875 at 2149.259 kb on - strand, within TX73_009875 at 2149.298 kb on + strand, within TX73_009875 at 2149.305 kb on + strand, within TX73_009875 at 2149.306 kb on - strand, within TX73_009875 at 2149.317 kb on + strand, within TX73_009875 at 2149.325 kb on - strand, within TX73_009875 at 2149.336 kb on - strand, within TX73_009875 at 2149.339 kb on - strand, within TX73_009875 at 2149.341 kb on + strand, within TX73_009875 at 2149.349 kb on - strand, within TX73_009875 at 2149.356 kb on - strand, within TX73_009875 at 2149.381 kb on + strand, within TX73_009875 at 2149.394 kb on - strand, within TX73_009875 at 2149.398 kb on + strand, within TX73_009875 at 2149.398 kb on + strand, within TX73_009875 at 2149.406 kb on - strand, within TX73_009875 at 2149.448 kb on - strand, within TX73_009875 at 2149.485 kb on + strand, within TX73_009875 at 2149.485 kb on + strand, within TX73_009875 at 2149.494 kb on + strand, within TX73_009875 at 2149.504 kb on + strand, within TX73_009875 at 2149.514 kb on - strand, within TX73_009875 at 2149.523 kb on + strand, within TX73_009875 at 2149.530 kb on + strand, within TX73_009875 at 2149.541 kb on + strand, within TX73_009875 at 2149.542 kb on + strand, within TX73_009875 at 2149.550 kb on - strand, within TX73_009875 at 2149.550 kb on - strand, within TX73_009875 at 2149.550 kb on - strand, within TX73_009875 at 2149.550 kb on - strand, within TX73_009875 at 2149.571 kb on - strand, within TX73_009875 at 2149.571 kb on - strand, within TX73_009875 at 2149.572 kb on - strand, within TX73_009875 at 2149.581 kb on - strand, within TX73_009875 at 2149.615 kb on - strand, within TX73_009875 at 2149.619 kb on - strand, within TX73_009875 at 2149.636 kb on - strand, within TX73_009875 at 2149.653 kb on + strand, within TX73_009875 at 2149.658 kb on + strand, within TX73_009875 at 2149.661 kb on + strand, within TX73_009875 at 2149.661 kb on - strand, within TX73_009875 at 2149.661 kb on - strand, within TX73_009875
Per-strain Table
Position Strand Gene LocusTag Fraction PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM remove 2,146,998 - TX73_009860 0.60 +0.9 2,147,007 + TX73_009860 0.61 +0.5 2,147,009 + TX73_009860 0.61 +0.1 2,147,056 - TX73_009860 0.67 +0.6 2,147,090 - TX73_009860 0.72 -0.2 2,147,153 - TX73_009860 0.80 -0.2 2,147,225 - TX73_009860 0.89 -0.7 2,147,272 - -0.2 2,147,288 + +0.3 2,147,310 + +0.2 2,147,310 + -0.0 2,147,318 - +0.2 2,147,319 - +0.1 2,147,358 + +0.4 2,147,359 - -0.6 2,147,366 - TX73_009865 0.10 +0.4 2,147,382 + TX73_009865 0.13 -0.1 2,147,412 - TX73_009865 0.18 -0.3 2,147,412 - TX73_009865 0.18 +0.4 2,147,438 + TX73_009865 0.23 -0.1 2,147,438 + TX73_009865 0.23 -0.0 2,147,446 - TX73_009865 0.24 -0.2 2,147,461 + TX73_009865 0.27 -0.0 2,147,461 + TX73_009865 0.27 -0.3 2,147,463 + TX73_009865 0.27 -0.2 2,147,482 - TX73_009865 0.30 -0.5 2,147,507 + TX73_009865 0.35 -0.2 2,147,508 + TX73_009865 0.35 -0.5 2,147,536 + TX73_009865 0.40 -0.0 2,147,554 + TX73_009865 0.43 +0.0 2,147,576 + TX73_009865 0.47 +0.1 2,147,584 - TX73_009865 0.48 -0.0 2,147,602 + TX73_009865 0.51 -0.4 2,147,668 + TX73_009865 0.63 -0.0 2,147,668 + TX73_009865 0.63 -0.4 2,147,676 - TX73_009865 0.64 +0.2 2,147,676 - TX73_009865 0.64 -0.3 2,147,707 - TX73_009865 0.70 -0.1 2,147,774 + TX73_009865 0.81 +0.2 2,147,782 - TX73_009865 0.83 -0.4 2,147,829 - -0.1 2,147,829 - -0.7 2,147,829 - +0.7 2,147,831 + -0.2 2,147,831 + -0.5 2,147,831 + -0.1 2,147,834 - -0.5 2,147,861 - -0.2 2,147,903 - +0.4 2,147,927 + -0.1 2,148,026 - +0.4 2,148,036 + -1.1 2,148,044 - +0.6 2,148,101 - TX73_009870 0.16 +0.6 2,148,113 + TX73_009870 0.18 -0.7 2,148,113 + TX73_009870 0.18 -1.0 2,148,128 + TX73_009870 0.20 +0.7 2,148,133 + TX73_009870 0.21 -0.2 2,148,193 + TX73_009870 0.30 -1.9 2,148,219 + TX73_009870 0.34 +0.4 2,148,219 + TX73_009870 0.34 +0.3 2,148,222 - TX73_009870 0.34 +0.7 2,148,222 - TX73_009870 0.34 -0.1 2,148,253 + TX73_009870 0.39 +1.0 2,148,253 + TX73_009870 0.39 +0.2 2,148,261 - TX73_009870 0.40 -0.5 2,148,324 + TX73_009870 0.49 +1.0 2,148,324 + TX73_009870 0.49 -0.2 2,148,374 + TX73_009870 0.57 -0.8 2,148,388 - TX73_009870 0.59 +1.4 2,148,399 - TX73_009870 0.60 +0.0 2,148,419 - TX73_009870 0.63 +0.4 2,148,436 - TX73_009870 0.66 -0.3 2,148,460 - TX73_009870 0.69 -1.2 2,148,490 - TX73_009870 0.74 -0.3 2,148,599 - +0.2 2,148,606 + -1.4 2,148,606 + -1.3 2,148,606 + -0.2 2,148,606 + +0.1 2,148,606 + -0.4 2,148,606 + -0.6 2,148,606 + +0.2 2,148,614 - +0.5 2,148,614 - +0.3 2,148,614 - -0.1 2,148,614 - -1.1 2,148,614 - +0.1 2,148,614 - +0.0 2,148,702 + +0.5 2,148,719 + -1.0 2,148,727 - -0.1 2,148,754 + -0.8 2,148,786 + -1.0 2,148,786 + +0.1 2,148,794 - -0.6 2,148,794 - -1.1 2,148,836 + TX73_009875 0.11 -1.4 2,148,836 + TX73_009875 0.11 +0.5 2,148,837 + TX73_009875 0.11 -0.1 2,148,844 - TX73_009875 0.12 -1.0 2,148,918 + TX73_009875 0.17 -0.3 2,148,931 - TX73_009875 0.18 -0.5 2,148,933 + TX73_009875 0.18 -1.9 2,148,955 + TX73_009875 0.20 +0.0 2,148,955 - TX73_009875 0.20 -1.2 2,148,992 + TX73_009875 0.22 -0.8 2,148,998 + TX73_009875 0.23 -0.3 2,148,998 - TX73_009875 0.23 -0.6 2,148,998 - TX73_009875 0.23 -1.6 2,149,006 - TX73_009875 0.23 -0.4 2,149,006 - TX73_009875 0.23 -0.8 2,149,030 + TX73_009875 0.25 -1.8 2,149,038 - TX73_009875 0.26 -0.2 2,149,038 - TX73_009875 0.26 -1.0 2,149,043 + TX73_009875 0.26 -0.7 2,149,063 + TX73_009875 0.27 -0.8 2,149,091 + TX73_009875 0.29 +1.7 2,149,097 - TX73_009875 0.30 -1.0 2,149,098 - TX73_009875 0.30 -1.8 2,149,099 - TX73_009875 0.30 -1.1 2,149,099 - TX73_009875 0.30 -0.8 2,149,099 - TX73_009875 0.30 -0.4 2,149,101 + TX73_009875 0.30 -0.3 2,149,109 - TX73_009875 0.31 -1.2 2,149,109 - TX73_009875 0.31 -0.8 2,149,119 + TX73_009875 0.31 -0.8 2,149,127 - TX73_009875 0.32 -2.0 2,149,233 + TX73_009875 0.40 -1.0 2,149,241 + TX73_009875 0.40 -0.2 2,149,241 + TX73_009875 0.40 -0.4 2,149,241 + TX73_009875 0.40 +0.0 2,149,249 - TX73_009875 0.41 -0.7 2,149,259 - TX73_009875 0.41 -0.2 2,149,298 + TX73_009875 0.44 +0.2 2,149,305 + TX73_009875 0.45 -0.9 2,149,306 - TX73_009875 0.45 -0.2 2,149,317 + TX73_009875 0.46 +0.1 2,149,325 - TX73_009875 0.46 -0.7 2,149,336 - TX73_009875 0.47 -0.1 2,149,339 - TX73_009875 0.47 -0.7 2,149,341 + TX73_009875 0.47 -0.2 2,149,349 - TX73_009875 0.48 -0.7 2,149,356 - TX73_009875 0.48 -0.3 2,149,381 + TX73_009875 0.50 -0.3 2,149,394 - TX73_009875 0.51 +0.0 2,149,398 + TX73_009875 0.51 -0.2 2,149,398 + TX73_009875 0.51 -0.9 2,149,406 - TX73_009875 0.52 -0.5 2,149,448 - TX73_009875 0.55 -0.8 2,149,485 + TX73_009875 0.58 -0.1 2,149,485 + TX73_009875 0.58 +0.1 2,149,494 + TX73_009875 0.58 -0.6 2,149,504 + TX73_009875 0.59 -0.2 2,149,514 - TX73_009875 0.60 -1.5 2,149,523 + TX73_009875 0.60 -0.2 2,149,530 + TX73_009875 0.61 -0.5 2,149,541 + TX73_009875 0.62 +0.3 2,149,542 + TX73_009875 0.62 -1.1 2,149,550 - TX73_009875 0.62 -0.8 2,149,550 - TX73_009875 0.62 +0.4 2,149,550 - TX73_009875 0.62 -1.1 2,149,550 - TX73_009875 0.62 -0.9 2,149,571 - TX73_009875 0.64 -0.7 2,149,571 - TX73_009875 0.64 -0.4 2,149,572 - TX73_009875 0.64 -0.2 2,149,581 - TX73_009875 0.65 -0.9 2,149,615 - TX73_009875 0.67 -0.1 2,149,619 - TX73_009875 0.67 -0.8 2,149,636 - TX73_009875 0.69 -0.1 2,149,653 + TX73_009875 0.70 -0.3 2,149,658 + TX73_009875 0.70 +0.1 2,149,661 + TX73_009875 0.70 +0.3 2,149,661 - TX73_009875 0.70 -0.3 2,149,661 - TX73_009875 0.70 -0.9
Or see this region's nucleotide sequence