Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_018055

Experiment: PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
3,934,978	+		TX73_018050	0.25	-0.2
3,935,002	-		TX73_018050	0.27	+0.6
3,935,009	+		TX73_018050	0.28	+0.8
3,935,009	+		TX73_018050	0.28	-0.0
3,935,009	+		TX73_018050	0.28	+0.1
3,935,017	-		TX73_018050	0.29	-0.9
3,935,017	-		TX73_018050	0.29	-0.2
3,935,040	+		TX73_018050	0.31	-0.0
3,935,063	-		TX73_018050	0.32	-0.2
3,935,081	-		TX73_018050	0.34	+0.2
3,935,081	-		TX73_018050	0.34	+0.3
3,935,137	+		TX73_018050	0.39	-0.2
3,935,147	+		TX73_018050	0.40	-0.6
3,935,172	+		TX73_018050	0.42	-0.0
3,935,250	-		TX73_018050	0.48	-0.0
3,935,250	-		TX73_018050	0.48	-0.0
3,935,257	+		TX73_018050	0.49	+0.3
3,935,290	-		TX73_018050	0.52	-0.6
3,935,308	+		TX73_018050	0.53	-1.3
3,935,309	-		TX73_018050	0.53	+0.5
3,935,314	-		TX73_018050	0.54	+0.2
3,935,356	-		TX73_018050	0.57	-0.0
3,935,356	-		TX73_018050	0.57	-1.0
3,935,374	-		TX73_018050	0.59	-0.7
3,935,394	+		TX73_018050	0.60	-0.4
3,935,419	+		TX73_018050	0.62	-0.6
3,935,421	-		TX73_018050	0.62	-0.5
3,935,498	+		TX73_018050	0.69	-0.3
3,935,498	+		TX73_018050	0.69	-0.6
3,935,498	+		TX73_018050	0.69	+1.1
3,935,498	+		TX73_018050	0.69	-0.6
3,935,498	+		TX73_018050	0.69	+0.2
3,935,523	+		TX73_018050	0.71	+0.4
3,935,530	+		TX73_018050	0.72	-1.2
3,935,576	+		TX73_018050	0.75	-0.7
3,935,581	+		TX73_018050	0.76	-0.3
3,935,581	-		TX73_018050	0.76	-0.0
3,935,581	-		TX73_018050	0.76	-0.8
3,935,584	-		TX73_018050	0.76	-0.3
3,935,586	-		TX73_018050	0.76	+1.4
3,935,605	-		TX73_018050	0.78	-1.3
3,935,609	-		TX73_018050	0.78	+0.6
3,935,627	+		TX73_018050	0.80	-1.1
3,935,629	-		TX73_018050	0.80	-0.8
3,935,662	-		TX73_018050	0.83	-0.2
3,935,662	-		TX73_018050	0.83	-0.1
3,935,671	+		TX73_018050	0.83	+0.1
3,935,671	+		TX73_018050	0.83	+1.2
3,935,678	+		TX73_018050	0.84	+0.2
3,935,678	+		TX73_018050	0.84	-0.2
3,935,678	+		TX73_018050	0.84	+0.0
3,935,683	+		TX73_018050	0.84	-0.2
3,935,686	-		TX73_018050	0.85	-0.3
3,935,704	+		TX73_018050	0.86	-1.0
3,935,712	-		TX73_018050	0.87	-0.1
3,935,715	+		TX73_018050	0.87	-0.4
3,935,723	-		TX73_018050	0.88	-0.2
3,935,728	-		TX73_018050	0.88	-0.4
3,935,771	-				-0.1
3,935,785	+				-1.3
3,935,785	+				-0.4
3,935,809	-				+0.6
3,935,809	-				-1.5
3,935,826	-				+0.3
3,935,864	+				-0.2
3,935,872	-				-0.5
3,935,874	+				-0.4
3,935,900	-				+0.1
3,935,926	-				-0.4
3,935,940	-				+0.3
3,935,949	+				-1.2
3,935,954	+				+0.3
3,935,997	-				-0.1
3,936,007	+				-0.5
3,936,012	-				-0.0
3,936,012	-				-0.9
3,936,041	-				+0.4
3,936,051	+				+0.1
3,936,061	+				-0.2
3,936,150	-		TX73_018055	0.14	-3.0
3,936,150	-		TX73_018055	0.14	+0.9
3,936,234	+		TX73_018055	0.21	-0.8
3,936,247	+		TX73_018055	0.22	-0.6
3,936,255	+		TX73_018055	0.23	-0.8
3,936,319	-		TX73_018055	0.28	-0.7
3,936,376	+		TX73_018055	0.33	-1.1
3,936,379	-		TX73_018055	0.33	-0.7
3,936,384	-		TX73_018055	0.33	-0.4
3,936,384	-		TX73_018055	0.33	-0.8
3,936,485	+		TX73_018055	0.42	+0.2
3,936,488	-		TX73_018055	0.42	-0.1
3,936,493	-		TX73_018055	0.42	+0.3
3,936,507	+		TX73_018055	0.44	-0.6
3,936,507	+		TX73_018055	0.44	+0.3
3,936,515	-		TX73_018055	0.44	-0.3
3,936,520	-		TX73_018055	0.45	-1.1
3,936,541	+		TX73_018055	0.46	-0.2
3,936,561	+		TX73_018055	0.48	-0.5
3,936,596	-		TX73_018055	0.51	+0.4
3,936,600	+		TX73_018055	0.51	-0.4
3,936,702	-		TX73_018055	0.60	+0.1
3,936,727	-		TX73_018055	0.62	-0.1
3,936,746	-		TX73_018055	0.63	-0.1
3,936,751	+		TX73_018055	0.64	-0.3
3,936,821	+		TX73_018055	0.70	-0.5
3,936,821	+		TX73_018055	0.70	-0.4
3,936,841	+		TX73_018055	0.71	+0.0
3,936,844	-		TX73_018055	0.71	-1.3
3,936,854	-		TX73_018055	0.72	-0.7
3,936,854	-		TX73_018055	0.72	-0.1
3,936,890	-		TX73_018055	0.75	-0.4
3,936,904	+		TX73_018055	0.76	-0.3
3,936,912	-		TX73_018055	0.77	-0.0
3,936,912	-		TX73_018055	0.77	-0.4
3,936,920	-		TX73_018055	0.78	-0.4
3,936,920	-		TX73_018055	0.78	-0.1
3,937,039	-		TX73_018055	0.88	+0.1
3,937,052	-		TX73_018055	0.89	+0.7
3,937,058	+		TX73_018055	0.89	+0.3
3,937,063	+		TX73_018055	0.90	-0.2
3,937,096	+				-1.5
3,937,136	-				+0.1
3,937,136	-				-1.0
3,937,138	-				-0.6
3,937,147	+				+0.1
3,937,168	+				+0.4
3,937,181	+				-0.6
3,937,187	+				+0.0
3,937,195	+				-1.2
3,937,203	+				+0.4
3,937,237	+				+0.2
3,937,237	+				-1.6
3,937,249	+				-0.7
3,937,254	-				-0.3
3,937,280	+				-1.3
3,937,283	-				-0.3
3,937,288	-				+1.2
3,937,288	-				-0.2
3,937,292	+				+0.4
3,937,300	-				-0.0
3,937,308	+				-0.3
3,937,308	+				+0.1
3,937,335	+				+0.3
3,937,339	+				-0.4
3,937,359	-				-0.2
3,937,366	+				-0.2
3,937,398	+				+0.2
3,937,435	+				+0.0
3,937,443	-				-0.3
3,937,443	-				-0.1
3,937,466	+				-0.1
3,937,479	-				+0.3
3,937,583	-		TX73_018060	0.24	+0.2
3,937,653	+		TX73_018060	0.35	+0.1
3,937,658	+		TX73_018060	0.36	-0.3
3,937,658	+		TX73_018060	0.36	-0.4
3,937,658	+		TX73_018060	0.36	-0.2
3,937,658	+		TX73_018060	0.36	-0.1
3,937,658	+		TX73_018060	0.36	+0.6
3,937,658	+		TX73_018060	0.36	-0.0
3,937,666	-		TX73_018060	0.37	+0.4
3,937,666	-		TX73_018060	0.37	+0.3
3,937,699	-		TX73_018060	0.42	+0.1
3,937,789	-		TX73_018060	0.57	+1.0
3,937,796	+		TX73_018060	0.58	+0.5
3,937,796	+		TX73_018060	0.58	+0.6
3,937,799	-		TX73_018060	0.59	+0.2
3,937,829	+		TX73_018060	0.64	+0.1
3,937,846	-		TX73_018060	0.66	+0.9
3,937,899	-		TX73_018060	0.75	+0.0
3,937,917	+		TX73_018060	0.78	+0.3
3,937,917	+		TX73_018060	0.78	-0.6
3,937,923	-		TX73_018060	0.79	-0.1
3,937,949	+		TX73_018060	0.83	+0.1
3,937,949	+		TX73_018060	0.83	-0.7
3,937,949	+		TX73_018060	0.83	+0.4
3,937,949	+		TX73_018060	0.83	+0.1
3,937,949	+		TX73_018060	0.83	+0.6
3,937,949	+		TX73_018060	0.83	+0.5
3,937,949	+		TX73_018060	0.83	-0.5
3,937,949	+		TX73_018060	0.83	+0.0
3,937,949	+		TX73_018060	0.83	+0.8
3,937,949	+		TX73_018060	0.83	+0.3
3,937,949	+		TX73_018060	0.83	+0.0
3,937,951	+		TX73_018060	0.83	+0.1
3,937,957	-		TX73_018060	0.84	+0.7
3,937,957	-		TX73_018060	0.84	-1.1
3,937,957	-		TX73_018060	0.84	-0.3
3,937,959	+		TX73_018060	0.85	+0.4
3,937,997	-				-0.1
3,938,041	-				-0.7
3,938,041	-				-0.2
3,938,050	-				+0.3
3,938,060	+				+1.1
3,938,060	+				-0.5
3,938,068	-				+0.0
3,938,068	-				+0.4
3,938,072	+				+0.6
3,938,125	-				-0.1
3,938,125	-				+0.2
3,938,137	+				-0.0
3,938,137	+				-0.0
3,938,137	+				+0.4
3,938,187	+				+1.7
3,938,187	+				+0.7