Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_011545

Experiment: PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
2,534,740	-		TX73_011540	0.59	-0.3
2,534,740	-		TX73_011540	0.59	-0.5
2,534,740	-		TX73_011540	0.59	+0.2
2,534,745	-		TX73_011540	0.59	+1.2
2,534,745	-		TX73_011540	0.59	-1.1
2,534,751	+		TX73_011540	0.59	-0.3
2,534,756	+		TX73_011540	0.60	+0.1
2,534,764	-		TX73_011540	0.60	-0.2
2,534,766	+		TX73_011540	0.60	-0.6
2,534,768	+		TX73_011540	0.60	-2.2
2,534,776	-		TX73_011540	0.61	-1.0
2,534,776	-		TX73_011540	0.61	+0.5
2,534,776	-		TX73_011540	0.61	+0.3
2,534,776	-		TX73_011540	0.61	-0.3
2,534,810	+		TX73_011540	0.63	-1.3
2,534,815	+		TX73_011540	0.63	-0.3
2,534,817	-		TX73_011540	0.63	-0.8
2,534,828	-		TX73_011540	0.64	-0.1
2,534,846	-		TX73_011540	0.65	+0.1
2,534,847	-		TX73_011540	0.65	+0.6
2,534,871	+		TX73_011540	0.66	-0.4
2,534,910	-		TX73_011540	0.68	+0.3
2,534,925	-		TX73_011540	0.69	-0.4
2,534,927	-		TX73_011540	0.69	+0.3
2,534,927	-		TX73_011540	0.69	-0.4
2,534,927	-		TX73_011540	0.69	-0.1
2,534,950	-		TX73_011540	0.71	-0.5
2,534,950	-		TX73_011540	0.71	-0.5
2,534,965	+		TX73_011540	0.72	+0.3
2,534,973	-		TX73_011540	0.72	-1.8
2,534,983	-		TX73_011540	0.73	+0.5
2,535,003	-		TX73_011540	0.74	-0.8
2,535,072	-		TX73_011540	0.78	-0.2
2,535,074	+		TX73_011540	0.78	+0.0
2,535,082	-		TX73_011540	0.78	+0.4
2,535,082	-		TX73_011540	0.78	+1.2
2,535,087	-		TX73_011540	0.78	-0.3
2,535,092	-		TX73_011540	0.79	-0.7
2,535,098	-		TX73_011540	0.79	+0.7
2,535,103	-		TX73_011540	0.79	-0.4
2,535,110	-		TX73_011540	0.80	+0.7
2,535,112	-		TX73_011540	0.80	-0.1
2,535,171	-		TX73_011540	0.83	-0.0
2,535,176	-		TX73_011540	0.84	+0.5
2,535,178	+		TX73_011540	0.84	+0.5
2,535,178	+		TX73_011540	0.84	+0.1
2,535,178	+		TX73_011540	0.84	-0.1
2,535,186	-		TX73_011540	0.84	+0.0
2,535,248	+		TX73_011540	0.88	+0.1
2,535,253	+		TX73_011540	0.88	+0.5
2,535,254	-		TX73_011540	0.88	-0.7
2,535,256	-		TX73_011540	0.88	-2.8
2,535,256	-		TX73_011540	0.88	-0.4
2,535,258	+		TX73_011540	0.88	-0.5
2,535,258	+		TX73_011540	0.88	-0.2
2,535,258	+		TX73_011540	0.88	-0.5
2,535,266	-		TX73_011540	0.89	+0.3
2,535,266	-		TX73_011540	0.89	-0.6
2,535,266	-		TX73_011540	0.89	-0.8
2,535,266	-		TX73_011540	0.89	+0.1
2,535,292	+				+0.6
2,535,343	+				-0.4
2,535,396	+				-0.8
2,535,438	-				-0.4
2,535,443	+				-0.1
2,535,443	+				-0.1
2,535,451	-				-0.1
2,535,451	-				-0.5
2,535,595	-				-0.6
2,535,595	-				-0.5
2,535,611	+				+1.5
2,535,625	-				-1.2
2,535,634	+				-0.5
2,535,634	+				+0.5
2,535,634	+				-0.3
2,535,634	+				+0.9
2,535,644	+				+0.4
2,535,653	-				-0.3
2,535,671	+				-1.2
2,535,673	-				-0.4
2,535,680	-				+0.3
2,535,702	+				-0.3
2,535,730	+				-0.3
2,535,730	+				-0.8
2,535,732	-				-1.4
2,535,732	-				-0.6
2,535,793	-				-0.9
2,535,806	-				-1.2
2,535,826	-		TX73_011545	0.11	-0.5
2,535,828	+		TX73_011545	0.11	-1.0
2,535,831	-		TX73_011545	0.12	-1.8
2,535,831	-		TX73_011545	0.12	+0.6
2,535,841	-		TX73_011545	0.13	+0.2
2,535,865	-		TX73_011545	0.16	-0.4
2,535,884	-		TX73_011545	0.18	-1.3
2,535,887	+		TX73_011545	0.18	-1.0
2,535,894	-		TX73_011545	0.19	-0.4
2,535,900	-		TX73_011545	0.20	-1.3
2,535,900	-		TX73_011545	0.20	+0.2
2,535,916	-		TX73_011545	0.22	-0.1
2,535,961	+		TX73_011545	0.27	-0.3
2,535,987	+		TX73_011545	0.30	-0.6
2,535,989	+		TX73_011545	0.30	-0.3
2,536,000	+		TX73_011545	0.32	-0.7
2,536,015	+		TX73_011545	0.33	-0.4
2,536,022	+		TX73_011545	0.34	-0.4
2,536,028	+		TX73_011545	0.35	-1.2
2,536,036	+		TX73_011545	0.36	+0.2
2,536,091	+		TX73_011545	0.42	+0.2
2,536,120	+		TX73_011545	0.46	-0.1
2,536,136	+		TX73_011545	0.48	-0.9
2,536,158	+		TX73_011545	0.50	-0.0
2,536,169	+		TX73_011545	0.52	+0.2
2,536,169	+		TX73_011545	0.52	-0.3
2,536,177	-		TX73_011545	0.53	-0.4
2,536,177	-		TX73_011545	0.53	-0.4
2,536,177	-		TX73_011545	0.53	-0.4
2,536,177	-		TX73_011545	0.53	-0.8
2,536,177	-		TX73_011545	0.53	-0.2
2,536,177	-		TX73_011545	0.53	-0.2
2,536,177	-		TX73_011545	0.53	+0.9
2,536,224	+		TX73_011545	0.58	-0.9
2,536,230	-		TX73_011545	0.59	-0.1
2,536,232	-		TX73_011545	0.59	-0.4
2,536,232	-		TX73_011545	0.59	+0.0
2,536,242	-		TX73_011545	0.60	-2.3
2,536,267	-		TX73_011545	0.63	-0.8
2,536,276	+		TX73_011545	0.64	-0.4
2,536,280	-		TX73_011545	0.65	+0.4
2,536,306	+		TX73_011545	0.68	+0.4
2,536,321	-		TX73_011545	0.70	-0.1
2,536,326	-		TX73_011545	0.70	+0.2
2,536,331	-		TX73_011545	0.71	+0.4
2,536,341	-		TX73_011545	0.72	-0.0
2,536,396	+		TX73_011545	0.79	-1.3
2,536,396	+		TX73_011545	0.79	+0.9
2,536,404	-		TX73_011545	0.80	-0.4
2,536,412	+		TX73_011545	0.81	-0.1
2,536,462	-		TX73_011545	0.86	-0.6
2,536,468	-		TX73_011545	0.87	-0.6
2,536,490	-		TX73_011545	0.90	-0.6
2,536,508	-				-0.8
2,536,514	+				+0.2
2,536,520	-				-0.4
2,536,539	+				-1.1
2,536,547	-				-0.3
2,536,594	+				-1.3
2,536,594	+				-0.1
2,536,594	+				-0.8
2,536,597	-				-0.7
2,536,602	-				+0.2
2,536,602	-				-0.7
2,536,602	-				-0.7
2,536,602	-				-0.3
2,536,602	-				+0.9
2,536,602	-				-0.1
2,536,602	-				-0.4
2,536,602	-				+0.3
2,536,602	-				-0.2
2,536,637	-		TX73_011550	0.12	+0.0
2,536,637	-		TX73_011550	0.12	-0.2
2,536,642	-		TX73_011550	0.13	-1.1
2,536,642	-		TX73_011550	0.13	+0.5
2,536,646	+		TX73_011550	0.14	-2.1
2,536,647	+		TX73_011550	0.14	+0.5
2,536,662	-		TX73_011550	0.17	+0.2
2,536,673	+		TX73_011550	0.19	-0.2
2,536,673	+		TX73_011550	0.19	+0.4
2,536,740	-		TX73_011550	0.32	-1.8
2,536,751	-		TX73_011550	0.34	-0.3
2,536,758	+		TX73_011550	0.36	-1.1
2,536,765	+		TX73_011550	0.37	-0.4
2,536,773	-		TX73_011550	0.39	-0.4
2,536,800	-		TX73_011550	0.44	-2.7
2,536,800	-		TX73_011550	0.44	-0.7
2,536,818	+		TX73_011550	0.47	-0.8
2,536,823	+		TX73_011550	0.48	-0.5
2,536,823	+		TX73_011550	0.48	+0.1
2,536,831	-		TX73_011550	0.50	-0.4
2,536,861	+		TX73_011550	0.55	-0.3
2,536,861	+		TX73_011550	0.55	-1.1
2,536,869	-		TX73_011550	0.57	-0.5
2,536,879	+		TX73_011550	0.59	+0.5
2,536,881	-		TX73_011550	0.59	-0.4
2,536,940	+		TX73_011550	0.70	+0.0
2,536,943	-		TX73_011550	0.71	-0.6
2,536,950	+		TX73_011550	0.72	-2.8
2,536,964	+		TX73_011550	0.75	-0.5
2,536,982	+		TX73_011550	0.79	-0.2
2,536,990	-		TX73_011550	0.80	-1.2
2,537,017	+		TX73_011550	0.85	-0.2
2,537,075	-				-0.9
2,537,075	-				-1.1
2,537,095	+				-1.6
2,537,103	-				-0.2
2,537,104	-				+0.3
2,537,115	+				-0.8
2,537,129	+				-0.1
2,537,129	+				+0.8
2,537,129	+				-0.3
2,537,137	+				+0.1
2,537,137	-				-0.5
2,537,137	-				-0.5
2,537,139	+		TX73_011555	0.10	+1.0
2,537,139	+		TX73_011555	0.10	+0.3
2,537,139	+		TX73_011555	0.10	+0.1
2,537,147	-		TX73_011555	0.12	-1.3
2,537,147	-		TX73_011555	0.12	-1.4
2,537,182	-		TX73_011555	0.19	+0.1
2,537,193	-		TX73_011555	0.22	-1.0
2,537,194	+		TX73_011555	0.22	+0.2
2,537,202	-		TX73_011555	0.24	-1.1
2,537,204	+		TX73_011555	0.24	-0.6
2,537,229	+		TX73_011555	0.29	-0.8
2,537,230	+		TX73_011555	0.30	-1.0
2,537,237	-		TX73_011555	0.31	+0.1
2,537,248	+		TX73_011555	0.33	+0.5
2,537,256	-		TX73_011555	0.35	-1.0
2,537,256	-		TX73_011555	0.35	+0.5
2,537,256	-		TX73_011555	0.35	+0.1
2,537,265	+		TX73_011555	0.37	-0.3
2,537,265	+		TX73_011555	0.37	+0.1
2,537,265	+		TX73_011555	0.37	-0.6
2,537,265	+		TX73_011555	0.37	+0.4
2,537,273	-		TX73_011555	0.39	-0.2
2,537,278	-		TX73_011555	0.40	-0.8
2,537,296	-		TX73_011555	0.43	-0.6
2,537,296	-		TX73_011555	0.43	-1.5
2,537,302	+		TX73_011555	0.45	+0.2
2,537,321	-		TX73_011555	0.49	-0.6
2,537,333	-		TX73_011555	0.51	-0.4
2,537,344	+		TX73_011555	0.54	-0.8
2,537,367	-		TX73_011555	0.58	-0.5
2,537,382	+		TX73_011555	0.62	-1.3
2,537,426	+		TX73_011555	0.71	+0.7
2,537,426	+		TX73_011555	0.71	-0.4
2,537,434	-		TX73_011555	0.73	-0.4
2,537,486	+		TX73_011555	0.84	-0.8
2,537,520	+				-0.3
2,537,538	-				-0.3
2,537,541	+				-2.0
2,537,549	-				+0.3
2,537,553	+				-1.8