Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_010205

Experiment: PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
2,229,213	-		TX73_010195	0.77	-2.1
2,229,216	+		TX73_010195	0.77	-2.0
2,229,244	-		TX73_010195	0.80	-3.0
2,229,245	-		TX73_010195	0.80	-3.9
2,229,274	+		TX73_010195	0.83	-5.8
2,229,274	+		TX73_010195	0.83	-3.7
2,229,274	+		TX73_010195	0.83	-3.9
2,229,278	-		TX73_010195	0.83	-1.8
2,229,282	-		TX73_010195	0.84	-2.9
2,229,294	+		TX73_010195	0.85	-1.9
2,229,297	-		TX73_010195	0.85	-2.8
2,229,297	-		TX73_010195	0.85	-3.3
2,229,308	+		TX73_010195	0.86	-4.1
2,229,308	-		TX73_010195	0.86	-3.5
2,229,309	+		TX73_010195	0.86	-2.7
2,229,326	+		TX73_010195	0.88	-4.1
2,229,326	+		TX73_010195	0.88	-0.6
2,229,326	+		TX73_010195	0.88	-1.4
2,229,326	+		TX73_010195	0.88	-1.4
2,229,326	+		TX73_010195	0.88	-1.9
2,229,327	-		TX73_010195	0.88	-3.4
2,229,332	-		TX73_010195	0.88	-3.8
2,229,336	+		TX73_010195	0.89	-3.6
2,229,361	-				-1.1
2,229,362	+				-2.7
2,229,410	-				+0.2
2,229,423	+				-2.4
2,229,430	-				+1.0
2,229,455	-				+0.3
2,229,464	+				+0.5
2,229,503	+				+2.2
2,229,503	+				+2.6
2,229,511	-				+2.7
2,229,511	-				+1.4
2,229,511	-				+2.3
2,229,511	-				+2.4
2,229,637	-		TX73_010200	0.18	+0.4
2,229,667	+		TX73_010200	0.24	-0.1
2,229,697	-		TX73_010200	0.31	-0.2
2,229,754	+		TX73_010200	0.44	-0.3
2,229,754	+		TX73_010200	0.44	-0.8
2,229,762	-		TX73_010200	0.45	+0.3
2,229,762	-		TX73_010200	0.45	+0.3
2,229,762	-		TX73_010200	0.45	-0.1
2,229,762	-		TX73_010200	0.45	-0.3
2,229,767	-		TX73_010200	0.46	+0.7
2,229,772	-		TX73_010200	0.48	-0.4
2,229,781	+		TX73_010200	0.50	+0.5
2,229,781	+		TX73_010200	0.50	+1.2
2,229,813	-		TX73_010200	0.57	-1.8
2,229,847	+		TX73_010200	0.64	-1.1
2,229,853	-		TX73_010200	0.66	+0.2
2,229,858	-		TX73_010200	0.67	-0.0
2,229,860	+		TX73_010200	0.67	-0.2
2,229,863	+		TX73_010200	0.68	+0.2
2,229,863	-		TX73_010200	0.68	+0.0
2,229,863	-		TX73_010200	0.68	-0.2
2,229,863	-		TX73_010200	0.68	+0.2
2,229,869	+		TX73_010200	0.69	+0.0
2,229,903	+		TX73_010200	0.77	+0.4
2,229,903	+		TX73_010200	0.77	+0.1
2,229,906	-		TX73_010200	0.77	+0.2
2,229,919	-		TX73_010200	0.80	-1.5
2,229,925	-		TX73_010200	0.82	+0.4
2,229,932	+		TX73_010200	0.83	+0.5
2,229,932	+		TX73_010200	0.83	-0.3
2,229,940	+		TX73_010200	0.85	-1.2
2,229,940	+		TX73_010200	0.85	-0.7
2,229,948	-		TX73_010200	0.87	+0.8
2,229,948	-		TX73_010200	0.87	-0.5
2,229,958	+		TX73_010200	0.89	+0.4
2,229,960	+		TX73_010200	0.89	-0.3
2,229,962	+		TX73_010200	0.90	-0.0
2,229,967	+				-0.2
2,229,967	+				-0.3
2,229,970	-				-2.3
2,229,970	-				+0.5
2,229,970	-				+0.4
2,229,977	+				+0.4
2,229,985	-				+0.3
2,229,995	-				+0.5
2,230,012	-				-1.5
2,230,019	-				-0.2
2,230,019	-				+0.1
2,230,044	+				-0.8
2,230,052	-				-1.5
2,230,054	+				-0.8
2,230,054	+				-0.4
2,230,054	+				+0.7
2,230,054	+				-0.7
2,230,054	+				-0.5
2,230,054	+				+0.5
2,230,054	+				+0.4
2,230,054	+				-1.2
2,230,054	+				-0.2
2,230,054	+				+0.4
2,230,054	+				-0.1
2,230,056	+				+0.2
2,230,056	+				-0.5
2,230,056	+				-0.4
2,230,056	+				+0.8
2,230,056	+				-1.0
2,230,056	+				+0.2
2,230,056	+				+0.1
2,230,058	+				+0.6
2,230,062	-				+1.5
2,230,062	-				-0.1
2,230,062	-				-0.3
2,230,062	-				-0.3
2,230,062	-				+0.5
2,230,062	-				-0.5
2,230,062	-				-0.4
2,230,064	-				+0.1
2,230,064	-				+1.2
2,230,064	-				+0.9
2,230,064	-				+0.2
2,230,064	-				+0.0
2,230,064	-				+0.1
2,230,064	-				+0.3
2,230,064	-				+0.4
2,230,066	-				-0.6
2,230,076	-				+0.4
2,230,076	-				+0.3
2,230,084	-				+0.3
2,230,201	+				+1.2
2,230,215	+				+1.1
2,230,216	+				+0.8
2,230,228	+				+1.4
2,230,228	-				+0.8
2,230,234	-				+0.9
2,230,234	-				+1.2
2,230,241	-		TX73_010205	0.10	+1.3
2,230,241	-		TX73_010205	0.10	+0.9
2,230,246	-		TX73_010205	0.11	+0.8
2,230,250	+		TX73_010205	0.12	+0.9
2,230,260	+		TX73_010205	0.13	+1.7
2,230,265	+		TX73_010205	0.14	+1.1
2,230,265	-		TX73_010205	0.14	+1.2
2,230,265	-		TX73_010205	0.14	+1.3
2,230,278	-		TX73_010205	0.16	+1.9
2,230,291	-		TX73_010205	0.18	+0.1
2,230,313	+		TX73_010205	0.21	+1.0
2,230,340	+		TX73_010205	0.25	+1.0
2,230,375	+		TX73_010205	0.30	+1.4
2,230,378	-		TX73_010205	0.31	+1.3
2,230,392	+		TX73_010205	0.33	+1.2
2,230,400	+		TX73_010205	0.34	+1.2
2,230,406	+		TX73_010205	0.35	+1.4
2,230,414	-		TX73_010205	0.36	+1.3
2,230,414	-		TX73_010205	0.36	+1.8
2,230,416	+		TX73_010205	0.36	+1.2
2,230,416	+		TX73_010205	0.36	+0.7
2,230,416	+		TX73_010205	0.36	+1.4
2,230,424	-		TX73_010205	0.37	+0.9
2,230,424	-		TX73_010205	0.37	+0.7
2,230,441	-		TX73_010205	0.40	+1.2
2,230,463	-		TX73_010205	0.43	-0.9
2,230,496	-		TX73_010205	0.48	+0.7
2,230,515	+		TX73_010205	0.51	+0.8
2,230,540	-		TX73_010205	0.54	+0.2
2,230,540	-		TX73_010205	0.54	+0.2
2,230,549	-		TX73_010205	0.56	+0.3
2,230,551	-		TX73_010205	0.56	+0.8
2,230,557	+		TX73_010205	0.57	+0.2
2,230,591	+		TX73_010205	0.62	+0.1
2,230,601	+		TX73_010205	0.63	+0.8
2,230,601	+		TX73_010205	0.63	+1.4
2,230,601	+		TX73_010205	0.63	+0.9
2,230,609	-		TX73_010205	0.65	+1.1
2,230,609	-		TX73_010205	0.65	+1.1
2,230,609	-		TX73_010205	0.65	+0.5
2,230,630	-		TX73_010205	0.68	+0.4
2,230,645	+		TX73_010205	0.70	+1.2
2,230,645	-		TX73_010205	0.70	+0.4
2,230,676	-		TX73_010205	0.74	+2.0
2,230,717	-		TX73_010205	0.81	+0.2
2,230,775	+		TX73_010205	0.89	+1.4
2,230,775	+		TX73_010205	0.89	+1.3
2,230,775	+		TX73_010205	0.89	+0.5
2,230,780	+		TX73_010205	0.90	+1.4
2,230,783	-				+0.9
2,230,785	+				-0.3
2,230,786	-				+0.9
2,230,804	-				+1.2
2,230,806	-				+1.3
2,230,881	-				-0.7
2,230,916	-				+0.5
2,230,928	+				-0.1
2,230,941	+				-0.7
2,230,941	+				+0.8
2,230,944	-				+0.1
2,230,956	+				-1.1
2,230,966	+				-1.2
2,230,974	-				-0.3
2,230,974	-				-0.3
2,230,985	+				-0.6
2,230,985	+				-0.1
2,230,988	-				+0.1
2,230,993	-				-0.7
2,230,993	-				-1.8
2,230,998	-				-0.8
2,231,004	+				-0.1
2,231,716	-				-0.3
2,231,716	-				-0.8
2,231,743	-				+0.6
2,231,775	+		TX73_010215	0.10	-0.4
2,231,775	+		TX73_010215	0.10	-1.9
2,231,792	+		TX73_010215	0.13	+0.0
2,231,793	+		TX73_010215	0.14	+1.1
2,231,800	-		TX73_010215	0.15	+0.3
2,231,804	+		TX73_010215	0.16	-0.9
2,231,811	-		TX73_010215	0.17	+0.4
2,231,812	-		TX73_010215	0.17	-0.4