Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_022750

Experiment: PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
4,940,925	+		TX73_022740	0.83	-0.4
4,940,933	-		TX73_022740	0.84	+2.1
4,940,946	+		TX73_022740	0.84	-0.1
4,940,946	+		TX73_022740	0.84	+0.6
4,941,010	+		TX73_022740	0.88	+0.6
4,941,062	+				+0.2
4,941,068	-				-0.1
4,941,068	-				-0.2
4,941,128	-				-0.8
4,941,135	+				+0.5
4,941,135	+				-1.7
4,941,151	+				+0.6
4,941,151	-				+0.1
4,941,159	-				+0.6
4,941,159	-				-0.1
4,941,161	-				-0.1
4,941,207	+				+0.3
4,941,213	-				-0.4
4,941,227	+				-3.0
4,941,269	-				+1.1
4,941,293	+				-0.4
4,941,293	+				-0.2
4,941,301	-				-4.6
4,941,804	+				+0.3
4,941,835	-				+0.1
4,941,838	+				-0.1
4,941,838	+				+0.2
4,941,846	-				-1.4
4,941,846	-				-1.2
4,941,846	-				-1.7
4,941,846	-				+0.8
4,941,846	-				+0.2
4,941,862	+				+0.2
4,941,862	+				-0.5
4,941,869	+				-1.6
4,941,869	+				-0.0
4,941,869	+				+0.7
4,941,869	+				+0.4
4,941,877	-				-0.6
4,941,877	-				+0.2
4,941,877	-				+0.0
4,941,877	-				+0.3
4,941,877	-				+0.0
4,941,881	-				-0.4
4,941,887	-				-1.1
4,941,891	-				-2.3
4,941,918	+				-0.7
4,941,931	+				+0.4
4,941,947	+				-0.3
4,941,953	-				+0.5
4,941,953	-				-0.4
4,941,963	-				-0.3
4,941,965	-				-0.2
4,941,987	-				+0.5
4,941,988	+				-0.2
4,941,988	+				-0.5
4,941,996	-				-0.7
4,941,998	+				+0.4
4,942,006	-				+0.1
4,942,006	-				+0.1
4,942,006	-				+0.3
4,942,068	+		TX73_022750	0.13	+0.4
4,942,074	+		TX73_022750	0.14	-3.2
4,942,081	+		TX73_022750	0.14	-1.7
4,942,081	+		TX73_022750	0.14	-1.2
4,942,089	-		TX73_022750	0.15	+0.7
4,942,093	+		TX73_022750	0.15	-2.0
4,942,093	+		TX73_022750	0.15	-0.0
4,942,101	-		TX73_022750	0.15	+0.5
4,942,105	-		TX73_022750	0.16	+0.0
4,942,105	-		TX73_022750	0.16	-1.3
4,942,112	+		TX73_022750	0.16	-0.8
4,942,165	-		TX73_022750	0.19	-0.8
4,942,165	-		TX73_022750	0.19	+0.0
4,942,181	-		TX73_022750	0.20	-0.4
4,942,193	+		TX73_022750	0.21	-0.4
4,942,193	+		TX73_022750	0.21	+0.3
4,942,198	+		TX73_022750	0.21	-0.5
4,942,201	-		TX73_022750	0.21	-0.9
4,942,208	+		TX73_022750	0.22	-0.4
4,942,212	-		TX73_022750	0.22	+0.2
4,942,229	+		TX73_022750	0.23	+0.6
4,942,234	+		TX73_022750	0.23	-0.4
4,942,277	+		TX73_022750	0.26	+0.4
4,942,290	+		TX73_022750	0.26	-0.3
4,942,298	-		TX73_022750	0.27	-0.4
4,942,298	-		TX73_022750	0.27	+0.5
4,942,307	-		TX73_022750	0.27	-2.0
4,942,321	-		TX73_022750	0.28	+1.0
4,942,329	-		TX73_022750	0.29	-1.0
4,942,334	-		TX73_022750	0.29	-0.8
4,942,350	+		TX73_022750	0.30	+0.6
4,942,350	-		TX73_022750	0.30	-0.5
4,942,358	-		TX73_022750	0.30	+0.4
4,942,360	-		TX73_022750	0.31	-2.0
4,942,369	-		TX73_022750	0.31	-0.6
4,942,414	-		TX73_022750	0.34	-0.6
4,942,421	+		TX73_022750	0.34	-0.4
4,942,424	-		TX73_022750	0.34	-0.6
4,942,429	-		TX73_022750	0.35	+0.9
4,942,429	-		TX73_022750	0.35	-0.4
4,942,537	-		TX73_022750	0.41	+0.3
4,942,591	-		TX73_022750	0.44	+1.2
4,942,639	+		TX73_022750	0.47	+0.3
4,942,647	-		TX73_022750	0.47	+0.3
4,942,649	+		TX73_022750	0.47	-0.3
4,942,649	+		TX73_022750	0.47	+0.4
4,942,667	-		TX73_022750	0.49	+0.4
4,942,678	+		TX73_022750	0.49	+0.5
4,942,686	-		TX73_022750	0.50	+0.3
4,942,695	-		TX73_022750	0.50	-0.4
4,942,696	+		TX73_022750	0.50	-2.2
4,942,706	+		TX73_022750	0.51	+0.2
4,942,714	+		TX73_022750	0.51	+1.2
4,942,722	-		TX73_022750	0.52	+0.7
4,942,828	+		TX73_022750	0.58	+0.3
4,942,864	-		TX73_022750	0.60	-1.6
4,942,945	-		TX73_022750	0.65	-0.3
4,942,988	+		TX73_022750	0.67	+1.0
4,942,988	+		TX73_022750	0.67	-0.6
4,942,995	+		TX73_022750	0.68	+0.8
4,942,995	+		TX73_022750	0.68	+0.3
4,942,995	+		TX73_022750	0.68	+0.4
4,942,995	+		TX73_022750	0.68	+0.6
4,942,995	+		TX73_022750	0.68	+0.5
4,942,995	+		TX73_022750	0.68	+0.2
4,942,998	-		TX73_022750	0.68	+0.1
4,943,002	+		TX73_022750	0.68	+0.8
4,943,003	-		TX73_022750	0.68	+0.2
4,943,003	-		TX73_022750	0.68	-0.3
4,943,003	-		TX73_022750	0.68	-0.1
4,943,004	-		TX73_022750	0.68	-0.6
4,943,010	-		TX73_022750	0.69	+1.0
4,943,012	-		TX73_022750	0.69	+0.3
4,943,029	+		TX73_022750	0.70	+0.1
4,943,029	+		TX73_022750	0.70	+1.2
4,943,029	+		TX73_022750	0.70	+0.8
4,943,029	+		TX73_022750	0.70	-3.0
4,943,029	+		TX73_022750	0.70	-1.6
4,943,029	+		TX73_022750	0.70	-0.7
4,943,029	+		TX73_022750	0.70	+0.3
4,943,037	-		TX73_022750	0.70	-0.9
4,943,037	-		TX73_022750	0.70	-0.8
4,943,037	-		TX73_022750	0.70	+0.6
4,943,038	+		TX73_022750	0.70	-0.5
4,943,038	+		TX73_022750	0.70	+0.7
4,943,039	+		TX73_022750	0.70	-1.4
4,943,042	-		TX73_022750	0.71	+0.8
4,943,048	+		TX73_022750	0.71	-0.3
4,943,079	+		TX73_022750	0.73	-0.5
4,943,082	-		TX73_022750	0.73	+0.2
4,943,099	-		TX73_022750	0.74	-1.3
4,943,106	-		TX73_022750	0.74	-0.9
4,943,120	+		TX73_022750	0.75	-0.7
4,943,125	+		TX73_022750	0.75	-0.3
4,943,148	-		TX73_022750	0.77	+0.0
4,943,179	+		TX73_022750	0.79	-0.7
4,943,179	+		TX73_022750	0.79	+0.5
4,943,179	+		TX73_022750	0.79	+0.3
4,943,209	-		TX73_022750	0.80	-1.6
4,943,214	-		TX73_022750	0.81	+0.0
4,943,236	-		TX73_022750	0.82	+0.3
4,943,251	-		TX73_022750	0.83	-0.6
4,943,254	+		TX73_022750	0.83	-1.4
4,943,254	+		TX73_022750	0.83	-0.3
4,943,254	+		TX73_022750	0.83	-0.0
4,943,261	-		TX73_022750	0.83	-0.8
4,943,262	-		TX73_022750	0.83	-1.3
4,943,262	-		TX73_022750	0.83	+0.6
4,943,262	-		TX73_022750	0.83	+0.6
4,943,264	+		TX73_022750	0.84	-0.9
4,943,281	+		TX73_022750	0.85	+0.5
4,943,287	-		TX73_022750	0.85	-0.7
4,943,306	+		TX73_022750	0.86	-0.6
4,943,314	-		TX73_022750	0.87	-0.1
4,943,368	-		TX73_022750	0.90	+0.0
4,943,371	+		TX73_022750	0.90	+0.7
4,943,397	-				+0.2
4,943,442	-				-0.5
4,943,446	+				+0.3
4,943,462	-				-0.5
4,943,462	-				+0.5
4,943,473	-				-0.7
4,943,487	+				-1.0
4,943,487	+				+0.2
4,943,487	+				-0.4
4,943,488	-				-1.8
4,943,488	-				+1.2
4,943,488	-				-1.0
4,943,495	-				+0.2
4,943,495	-				-1.0
4,943,495	-				-0.2
4,943,495	-				-1.9
4,943,495	-				-0.6
4,943,500	+				+0.1
4,943,504	+				+0.3
4,943,504	+				+0.1
4,943,538	+				+0.5
4,943,576	-				-0.1
4,943,597	+				+0.2
4,943,600	-				+0.7
4,943,604	-				+0.0
4,943,605	-				-0.4
4,943,613	-				-0.5
4,943,677	+				+0.0
4,943,677	+				-0.6
4,943,682	-				-0.5
4,943,689	-				-0.3
4,943,725	-				+0.4
4,943,726	-				-0.3
4,943,733	+				-0.1
4,943,735	+				+0.2
4,943,741	-				+0.3
4,943,743	-				-1.4
4,943,744	-				+0.0
4,943,800	-				+1.2
4,943,843	-		TX73_022755	0.18	+1.2
4,943,885	-		TX73_022755	0.27	+1.0
4,943,953	+		TX73_022755	0.41	-0.7
4,943,970	+		TX73_022755	0.44	-1.4
4,943,996	-		TX73_022755	0.49	-0.9
4,943,997	+		TX73_022755	0.50	-0.7
4,944,006	-		TX73_022755	0.52	+0.4
4,944,006	-		TX73_022755	0.52	-0.8
4,944,007	+		TX73_022755	0.52	+0.8
4,944,015	-		TX73_022755	0.53	-1.1
4,944,017	+		TX73_022755	0.54	-0.7
4,944,025	-		TX73_022755	0.55	-0.3
4,944,025	-		TX73_022755	0.55	-1.0
4,944,032	+		TX73_022755	0.57	-0.5
4,944,064	+		TX73_022755	0.63	-0.5
4,944,109	-		TX73_022755	0.73	-0.4
4,944,115	-		TX73_022755	0.74	-0.3
4,944,122	-		TX73_022755	0.75	-1.0
4,944,131	+		TX73_022755	0.77	+1.3
4,944,131	+		TX73_022755	0.77	+0.3
4,944,134	-		TX73_022755	0.78	+0.5
4,944,134	-		TX73_022755	0.78	+0.6
4,944,134	-		TX73_022755	0.78	-0.1
4,944,139	-		TX73_022755	0.79	-0.0
4,944,139	-		TX73_022755	0.79	+0.1
4,944,139	-		TX73_022755	0.79	+0.4
4,944,139	-		TX73_022755	0.79	+0.2
4,944,152	+		TX73_022755	0.81	-0.2
4,944,152	+		TX73_022755	0.81	+0.2
4,944,180	-		TX73_022755	0.87	+0.9
4,944,180	-		TX73_022755	0.87	+1.0
4,944,185	-		TX73_022755	0.88	-0.4
4,944,195	+				-1.2
4,944,195	+				+1.0
4,944,203	-				-1.6
4,944,205	+				-1.4
4,944,219	-				-0.4
4,944,225	+				-0.9
4,944,233	-				-1.5
4,944,233	-				+0.5
4,944,252	+				-2.5
4,944,270	+				+0.1
4,944,275	+				+0.7
4,944,275	+				-0.6
4,944,278	-				+0.2
4,944,278	-				+0.8
4,944,283	-				+0.3
4,944,283	-				+0.1
4,944,283	-				-0.1
4,944,283	-				+0.5
4,944,283	-				-2.4
4,944,283	-				-0.0
4,944,288	-				+0.3
4,944,367	+				-0.5
4,944,388	-				+1.0
4,944,403	+				+1.0
4,944,408	+				+0.0
4,944,421	-				-0.5
4,944,442	+				-0.6
4,944,445	-				-1.0