Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_011395

Experiment: PM with butyrate aerobic in dark

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PM with butyrate aerobic in dark
2,484,769	+		TX73_011390	0.36	-0.7
2,484,769	+		TX73_011390	0.36	+0.0
2,484,769	+		TX73_011390	0.36	-0.6
2,484,777	-		TX73_011390	0.37	+0.4
2,484,777	-		TX73_011390	0.37	-0.2
2,484,786	+		TX73_011390	0.37	-1.1
2,484,796	+		TX73_011390	0.38	-1.1
2,484,802	-		TX73_011390	0.38	-0.2
2,484,802	-		TX73_011390	0.38	-0.7
2,484,831	+		TX73_011390	0.40	-0.1
2,484,831	+		TX73_011390	0.40	-0.1
2,484,839	-		TX73_011390	0.41	-0.6
2,484,839	-		TX73_011390	0.41	-0.5
2,484,839	-		TX73_011390	0.41	-0.3
2,484,840	+		TX73_011390	0.41	+0.2
2,484,840	+		TX73_011390	0.41	+0.7
2,484,844	-		TX73_011390	0.41	-0.3
2,484,850	+		TX73_011390	0.41	+0.1
2,484,850	+		TX73_011390	0.41	-1.3
2,484,850	+		TX73_011390	0.41	-0.4
2,484,892	+		TX73_011390	0.44	+0.6
2,484,922	+		TX73_011390	0.46	-0.4
2,484,937	-		TX73_011390	0.47	+0.4
2,484,943	+		TX73_011390	0.47	-0.4
2,485,057	+		TX73_011390	0.54	+0.1
2,485,058	+		TX73_011390	0.54	-0.9
2,485,082	-		TX73_011390	0.56	-0.3
2,485,091	+		TX73_011390	0.57	-1.1
2,485,146	+		TX73_011390	0.60	+0.2
2,485,165	+		TX73_011390	0.61	-0.5
2,485,176	+		TX73_011390	0.62	+0.5
2,485,195	+		TX73_011390	0.63	+0.2
2,485,202	+		TX73_011390	0.64	-0.6
2,485,202	+		TX73_011390	0.64	-0.2
2,485,205	-		TX73_011390	0.64	-1.4
2,485,219	+		TX73_011390	0.65	+0.6
2,485,228	-		TX73_011390	0.65	-0.3
2,485,262	-		TX73_011390	0.67	-0.2
2,485,327	-		TX73_011390	0.72	-0.2
2,485,333	+		TX73_011390	0.72	-0.1
2,485,352	+		TX73_011390	0.73	+0.5
2,485,362	+		TX73_011390	0.74	-1.0
2,485,402	+		TX73_011390	0.76	+0.1
2,485,449	-		TX73_011390	0.79	+0.0
2,485,508	+		TX73_011390	0.83	+0.1
2,485,513	+		TX73_011390	0.83	+0.1
2,485,566	+		TX73_011390	0.87	+0.0
2,485,646	-				+0.8
2,485,684	-				-0.2
2,485,708	+				-0.6
2,485,709	+				+0.9
2,485,751	+				-0.2
2,485,759	-				+0.2
2,485,798	+				+0.1
2,485,806	-				-0.1
2,485,826	+				-0.4
2,485,863	+		TX73_011395	0.11	-0.1
2,485,866	+		TX73_011395	0.11	-0.8
2,485,871	-		TX73_011395	0.12	+0.3
2,485,890	+		TX73_011395	0.14	-0.3
2,485,907	-		TX73_011395	0.16	-0.3
2,485,910	+		TX73_011395	0.16	+0.3
2,485,916	-		TX73_011395	0.17	+0.5
2,485,949	-		TX73_011395	0.20	-0.8
2,485,949	-		TX73_011395	0.20	-0.1
2,485,953	+		TX73_011395	0.21	-1.1
2,486,033	-		TX73_011395	0.30	-0.3
2,486,035	+		TX73_011395	0.30	-0.3
2,486,054	+		TX73_011395	0.32	-0.4
2,486,055	-		TX73_011395	0.32	+0.0
2,486,065	+		TX73_011395	0.34	+0.2
2,486,068	+		TX73_011395	0.34	-0.1
2,486,068	+		TX73_011395	0.34	-0.4
2,486,203	-		TX73_011395	0.49	-0.3
2,486,247	-		TX73_011395	0.54	-0.1
2,486,302	+		TX73_011395	0.60	-0.7
2,486,315	-		TX73_011395	0.62	+0.6
2,486,320	-		TX73_011395	0.62	-1.7
2,486,360	+		TX73_011395	0.67	-0.9
2,486,368	-		TX73_011395	0.68	-0.3
2,486,384	-		TX73_011395	0.70	-0.0
2,486,423	+		TX73_011395	0.74	+0.7
2,486,445	-		TX73_011395	0.76	-0.7
2,486,446	+		TX73_011395	0.77	-0.4
2,486,459	-		TX73_011395	0.78	-0.7
2,486,466	+		TX73_011395	0.79	-0.7
2,486,591	+				+0.1
2,486,598	+				-0.6
2,486,601	-				-0.4
2,486,631	+				-0.6
2,486,639	-				+0.6
2,486,646	+				-0.3
2,486,646	+				+0.5
2,486,646	+				-1.5
2,486,736	+				-0.2
2,486,736	+				+0.3
2,486,746	+		TX73_011400	0.10	-0.5
2,486,800	+		TX73_011400	0.16	+0.2
2,486,808	-		TX73_011400	0.17	-0.3
2,486,817	-		TX73_011400	0.18	-0.5
2,486,824	+		TX73_011400	0.19	-1.7
2,486,846	+		TX73_011400	0.22	-0.4
2,486,863	-		TX73_011400	0.23	-0.1
2,486,882	-		TX73_011400	0.26	+0.1
2,486,894	+		TX73_011400	0.27	-1.1
2,486,902	+		TX73_011400	0.28	-0.6
2,486,902	-		TX73_011400	0.28	-0.2
2,486,929	+		TX73_011400	0.31	-0.4
2,486,929	+		TX73_011400	0.31	-1.0
2,486,948	-		TX73_011400	0.33	-0.5
2,486,957	-		TX73_011400	0.34	-0.3
2,486,958	-		TX73_011400	0.34	-1.0
2,486,980	+		TX73_011400	0.37	+0.4
2,486,980	+		TX73_011400	0.37	+0.1
2,486,980	-		TX73_011400	0.37	+0.2
2,487,003	+		TX73_011400	0.39	-0.7
2,487,011	-		TX73_011400	0.40	+1.4
2,487,011	-		TX73_011400	0.40	-0.6
2,487,042	+		TX73_011400	0.44	+0.5
2,487,042	+		TX73_011400	0.44	-0.8
2,487,112	+		TX73_011400	0.51	+0.4
2,487,113	+		TX73_011400	0.52	+0.7
2,487,120	-		TX73_011400	0.52	+1.1
2,487,120	-		TX73_011400	0.52	-0.9
2,487,120	-		TX73_011400	0.52	-0.3
2,487,120	-		TX73_011400	0.52	-1.6
2,487,120	-		TX73_011400	0.52	-0.1
2,487,141	+		TX73_011400	0.55	+0.1
2,487,162	-		TX73_011400	0.57	-1.5
2,487,167	-		TX73_011400	0.58	-2.3
2,487,168	-		TX73_011400	0.58	+0.8
2,487,185	-		TX73_011400	0.60	+0.2
2,487,185	-		TX73_011400	0.60	-0.9
2,487,219	-		TX73_011400	0.63	-1.0
2,487,225	+		TX73_011400	0.64	-0.5
2,487,268	+		TX73_011400	0.69	-0.1
2,487,271	-		TX73_011400	0.69	-0.6
2,487,276	-		TX73_011400	0.70	-0.8
2,487,281	-		TX73_011400	0.70	+0.9
2,487,294	-		TX73_011400	0.72	-0.5
2,487,301	+		TX73_011400	0.73	-1.0
2,487,309	-		TX73_011400	0.74	+0.2
2,487,316	+		TX73_011400	0.74	-0.9
2,487,357	+		TX73_011400	0.79	-0.2
2,487,357	+		TX73_011400	0.79	+0.8
2,487,366	+		TX73_011400	0.80	-0.2
2,487,374	-		TX73_011400	0.81	-0.7
2,487,376	+		TX73_011400	0.81	+0.2
2,487,376	+		TX73_011400	0.81	-0.4
2,487,386	-		TX73_011400	0.82	+0.0
2,487,392	+		TX73_011400	0.83	-0.1
2,487,393	+		TX73_011400	0.83	-0.8
2,487,393	+		TX73_011400	0.83	-0.6
2,487,397	+		TX73_011400	0.83	-0.5
2,487,401	-		TX73_011400	0.84	-0.2
2,487,405	-		TX73_011400	0.84	+0.4
2,487,406	-		TX73_011400	0.84	-0.2
2,487,411	-		TX73_011400	0.85	+0.6
2,487,467	+				+0.0
2,487,475	-				+0.1
2,487,501	+				-1.3
2,487,509	-				-1.8
2,487,511	+				+0.0
2,487,541	-				+0.9
2,487,560	+				-0.1
2,487,584	-				-0.1
2,487,611	+				-0.2
2,487,611	+				-0.9
2,487,619	-				+0.5