Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_024795

Experiment: PM with succinate aerobic in dark

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PM with succinate aerobic in dark
5,384,543	-		TX73_024790	0.41	-0.5
5,384,543	-		TX73_024790	0.41	+0.4
5,384,583	+		TX73_024790	0.44	-0.3
5,384,607	-		TX73_024790	0.46	+0.7
5,384,609	+		TX73_024790	0.46	+0.9
5,384,617	-		TX73_024790	0.47	+0.9
5,384,622	+		TX73_024790	0.47	+1.4
5,384,622	+		TX73_024790	0.47	-0.4
5,384,652	+		TX73_024790	0.49	-0.3
5,384,652	+		TX73_024790	0.49	-1.5
5,384,652	+		TX73_024790	0.49	-0.1
5,384,652	+		TX73_024790	0.49	+0.1
5,384,657	+		TX73_024790	0.50	+0.5
5,384,660	-		TX73_024790	0.50	-1.1
5,384,660	-		TX73_024790	0.50	-0.2
5,384,675	-		TX73_024790	0.51	+0.1
5,384,675	-		TX73_024790	0.51	-2.7
5,384,677	+		TX73_024790	0.51	+0.4
5,384,739	+		TX73_024790	0.56	+0.4
5,384,747	-		TX73_024790	0.57	+0.6
5,384,802	+		TX73_024790	0.61	+1.7
5,384,809	-		TX73_024790	0.62	+0.6
5,384,814	-		TX73_024790	0.62	+0.0
5,384,880	+		TX73_024790	0.67	+0.3
5,384,887	-		TX73_024790	0.68	+0.9
5,384,900	-		TX73_024790	0.69	+0.3
5,384,901	+		TX73_024790	0.69	+0.5
5,384,917	+		TX73_024790	0.70	-1.1
5,384,925	+		TX73_024790	0.71	+0.9
5,384,925	+		TX73_024790	0.71	-0.7
5,384,926	-		TX73_024790	0.71	+1.5
5,384,934	+		TX73_024790	0.72	+1.4
5,384,943	-		TX73_024790	0.72	+0.7
5,384,991	+		TX73_024790	0.76	-0.5
5,384,996	+		TX73_024790	0.77	+1.5
5,384,997	+		TX73_024790	0.77	-0.1
5,385,032	+		TX73_024790	0.79	+0.4
5,385,038	+		TX73_024790	0.80	+0.3
5,385,049	+		TX73_024790	0.81	+1.0
5,385,049	+		TX73_024790	0.81	-1.1
5,385,078	+		TX73_024790	0.83	+0.9
5,385,084	+		TX73_024790	0.83	+0.4
5,385,106	+		TX73_024790	0.85	+0.5
5,385,123	-		TX73_024790	0.87	+1.2
5,385,127	+		TX73_024790	0.87	+0.5
5,385,127	+		TX73_024790	0.87	+1.4
5,385,135	+		TX73_024790	0.88	-1.5
5,385,135	+		TX73_024790	0.88	+0.0
5,385,135	-		TX73_024790	0.88	-0.9
5,385,135	-		TX73_024790	0.88	-0.1
5,385,143	-		TX73_024790	0.88	+0.3
5,385,174	+				+1.1
5,385,177	-				+0.5
5,385,182	-				-0.1
5,385,182	-				-0.6
5,385,245	-				+1.1
5,385,260	-				-0.1
5,385,260	-				-0.2
5,385,260	-				+0.1
5,385,260	-				-0.1
5,385,299	+				+0.1
5,385,307	-				+0.7
5,385,329	-				-1.1
5,385,371	-				+0.4
5,385,380	+				+0.1
5,385,380	+				-0.0
5,385,388	-				+0.7
5,385,388	-				+0.2
5,385,388	-				-0.8
5,385,388	-				-1.3
5,385,388	-				-0.1
5,385,388	-				-0.5
5,385,390	+				+2.0
5,385,390	+				-0.8
5,385,390	+				+0.8
5,385,390	+				-0.8
5,385,398	-				-1.6
5,385,398	-				+0.3
5,385,398	-				+0.7
5,385,400	+				-0.7
5,385,415	-				+0.3
5,385,456	+				-0.2
5,385,464	-				-0.6
5,385,464	-				-0.1
5,385,466	+				-2.3
5,385,469	+				-0.2
5,385,476	-				+0.1
5,385,477	-				-0.4
5,385,570	+				+0.5
5,385,578	+				-1.5
5,385,578	-				+0.4
5,385,612	+		TX73_024795	0.18	-0.9
5,385,635	+		TX73_024795	0.23	+0.6
5,385,635	+		TX73_024795	0.23	-0.9
5,385,635	+		TX73_024795	0.23	+0.7
5,385,643	-		TX73_024795	0.25	+0.6
5,385,648	-		TX73_024795	0.27	-1.5
5,385,658	+		TX73_024795	0.29	-0.5
5,385,673	+		TX73_024795	0.33	+0.2
5,385,687	+		TX73_024795	0.37	+0.3
5,385,713	-		TX73_024795	0.43	-1.5
5,385,724	+		TX73_024795	0.46	-1.1
5,385,732	-		TX73_024795	0.48	-1.0
5,385,732	-		TX73_024795	0.48	-0.4
5,385,732	-		TX73_024795	0.48	-2.1
5,385,752	-		TX73_024795	0.53	-1.7
5,385,789	+		TX73_024795	0.63	-1.0
5,385,789	+		TX73_024795	0.63	-0.3
5,385,789	+		TX73_024795	0.63	+0.4
5,385,850	-		TX73_024795	0.78	+0.6
5,385,852	-		TX73_024795	0.79	+0.3
5,385,861	-		TX73_024795	0.81	-2.3
5,385,915	-				+1.0
5,385,963	-				-0.1
5,385,978	+				+0.5
5,386,000	-				-0.5
5,386,014	+				-0.1
5,386,042	-				+0.5
5,386,049	-				+0.3
5,386,049	-				+1.0
5,386,049	-				-0.3
5,386,071	+				-1.9
5,386,076	-				+0.1
5,386,079	-				-0.8
5,386,094	-				+1.1
5,386,095	-				+0.4
5,386,107	+				-0.2
5,386,107	+				-0.3
5,386,115	-		TX73_024800	0.10	-0.6
5,386,115	-		TX73_024800	0.10	+0.9
5,386,115	-		TX73_024800	0.10	-0.3
5,386,176	-		TX73_024800	0.16	-0.2
5,386,194	-		TX73_024800	0.18	+0.1
5,386,216	+		TX73_024800	0.20	-0.7
5,386,232	-		TX73_024800	0.22	+0.2
5,386,244	+		TX73_024800	0.23	-0.8
5,386,252	-		TX73_024800	0.24	+0.1
5,386,267	+		TX73_024800	0.26	-0.9
5,386,267	-		TX73_024800	0.26	+0.7
5,386,269	+		TX73_024800	0.26	+1.3
5,386,293	+		TX73_024800	0.28	-0.6
5,386,324	+		TX73_024800	0.31	-1.5
5,386,324	+		TX73_024800	0.31	-1.2
5,386,324	+		TX73_024800	0.31	-0.7
5,386,331	+		TX73_024800	0.32	-0.1
5,386,332	-		TX73_024800	0.32	-0.5
5,386,334	-		TX73_024800	0.32	+0.4
5,386,339	-		TX73_024800	0.33	+1.3
5,386,353	+		TX73_024800	0.34	+1.1
5,386,396	+		TX73_024800	0.38	+0.3
5,386,484	+		TX73_024800	0.47	+0.1
5,386,492	-		TX73_024800	0.48	-0.4
5,386,502	-		TX73_024800	0.49	+0.2
5,386,528	+		TX73_024800	0.52	-1.9
5,386,532	+		TX73_024800	0.52	-0.3
5,386,532	+		TX73_024800	0.52	+0.3
5,386,532	+		TX73_024800	0.52	-1.3
5,386,540	-		TX73_024800	0.53	+1.0
5,386,556	+		TX73_024800	0.54	+0.1
5,386,556	+		TX73_024800	0.54	-1.5
5,386,556	+		TX73_024800	0.54	+0.9
5,386,562	+		TX73_024800	0.55	-0.2
5,386,570	-		TX73_024800	0.56	-0.5
5,386,571	-		TX73_024800	0.56	-0.8
5,386,581	-		TX73_024800	0.57	-0.2
5,386,594	-		TX73_024800	0.58	+0.6
5,386,626	-		TX73_024800	0.61	-1.4
5,386,626	-		TX73_024800	0.61	+1.2
5,386,648	+		TX73_024800	0.64	-1.0
5,386,662	-		TX73_024800	0.65	+0.0
5,386,681	-		TX73_024800	0.67	-1.0
5,386,681	-		TX73_024800	0.67	+0.4
5,386,686	-		TX73_024800	0.67	+1.4
5,386,700	+		TX73_024800	0.69	+0.4
5,386,707	-		TX73_024800	0.69	+1.3
5,386,724	+		TX73_024800	0.71	+0.4
5,386,744	+		TX73_024800	0.73	+1.0
5,386,800	-		TX73_024800	0.79	-3.0
5,386,818	-		TX73_024800	0.81	+1.0
5,386,832	+		TX73_024800	0.82	-0.3
5,386,832	+		TX73_024800	0.82	-1.6
5,386,840	-		TX73_024800	0.83	-0.6
5,386,850	-		TX73_024800	0.84	-2.1
5,386,876	-		TX73_024800	0.86	-0.0
5,386,879	+		TX73_024800	0.87	+0.1
5,386,884	+		TX73_024800	0.87	-0.3
5,386,901	-		TX73_024800	0.89	-0.8
5,386,931	-				-0.5