Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_011535

Experiment: PM with succinate aerobic in dark

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PM with succinate aerobic in dark
2,530,606	-		TX73_011525	0.58	+0.5
2,530,606	-		TX73_011525	0.58	+1.3
2,530,606	-		TX73_011525	0.58	-0.3
2,530,608	+		TX73_011525	0.58	+1.2
2,530,613	+		TX73_011525	0.59	-0.7
2,530,616	-		TX73_011525	0.59	+0.5
2,530,624	-		TX73_011525	0.60	-0.1
2,530,647	+		TX73_011525	0.62	-0.6
2,530,648	+		TX73_011525	0.62	-0.0
2,530,655	-		TX73_011525	0.63	-0.3
2,530,655	-		TX73_011525	0.63	-0.3
2,530,655	-		TX73_011525	0.63	-0.6
2,530,685	-		TX73_011525	0.66	-0.3
2,530,701	-		TX73_011525	0.68	-0.6
2,530,708	+		TX73_011525	0.68	+0.1
2,530,713	-		TX73_011525	0.69	-1.2
2,530,733	+		TX73_011525	0.71	+0.1
2,530,751	-		TX73_011525	0.73	+0.0
2,530,779	+		TX73_011525	0.76	-0.0
2,530,782	-		TX73_011525	0.76	-1.4
2,530,797	-		TX73_011525	0.77	-0.0
2,530,851	+		TX73_011525	0.83	+0.2
2,530,851	+		TX73_011525	0.83	-1.2
2,530,859	-		TX73_011525	0.84	-0.4
2,530,859	-		TX73_011525	0.84	-0.4
2,530,859	-		TX73_011525	0.84	-1.1
2,530,859	-		TX73_011525	0.84	-0.6
2,530,867	+		TX73_011525	0.84	-0.0
2,530,870	-		TX73_011525	0.85	-0.8
2,530,890	+		TX73_011525	0.87	+0.4
2,530,903	-		TX73_011525	0.88	+1.1
2,530,906	+		TX73_011525	0.88	+0.0
2,530,951	+				-0.8
2,531,020	-				+0.0
2,531,072	+				+0.3
2,531,204	-		TX73_011530	0.11	+0.6
2,531,228	-		TX73_011530	0.16	+0.1
2,531,242	+		TX73_011530	0.19	-0.2
2,531,272	-		TX73_011530	0.26	-0.1
2,531,285	+		TX73_011530	0.29	-0.1
2,531,300	-		TX73_011530	0.32	-0.4
2,531,307	+		TX73_011530	0.34	-0.2
2,531,317	-		TX73_011530	0.36	+0.6
2,531,321	-		TX73_011530	0.37	-0.2
2,531,435	-		TX73_011530	0.63	+0.5
2,531,471	-		TX73_011530	0.71	-0.1
2,531,504	-		TX73_011530	0.78	-0.5
2,531,504	-		TX73_011530	0.78	-0.3
2,531,506	+		TX73_011530	0.79	+0.5
2,531,532	-		TX73_011530	0.85	-2.9
2,531,570	+				-0.4
2,531,570	+				-0.9
2,531,590	-				-1.4
2,531,621	-				+0.0
2,531,643	+				+0.1
2,531,679	+				+0.4
2,531,701	+				+0.2
2,531,709	+				+0.6
2,531,725	+				+0.3
2,531,747	+				-0.3
2,531,747	+				-0.8
2,531,829	+		TX73_011535	0.12	-1.5
2,531,922	+		TX73_011535	0.16	-0.4
2,531,926	+		TX73_011535	0.16	-1.2
2,531,964	+		TX73_011535	0.18	+0.0
2,531,964	+		TX73_011535	0.18	+2.2
2,531,964	+		TX73_011535	0.18	-0.2
2,531,964	+		TX73_011535	0.18	-0.6
2,531,972	-		TX73_011535	0.19	+0.3
2,531,972	-		TX73_011535	0.19	+0.1
2,532,026	-		TX73_011535	0.21	+0.3
2,532,040	+		TX73_011535	0.22	+1.2
2,532,048	-		TX73_011535	0.23	+0.2
2,532,050	-		TX73_011535	0.23	-0.2
2,532,059	-		TX73_011535	0.23	+0.2
2,532,059	-		TX73_011535	0.23	-0.5
2,532,059	-		TX73_011535	0.23	-0.8
2,532,062	+		TX73_011535	0.23	-1.0
2,532,126	+		TX73_011535	0.26	-1.1
2,532,131	+		TX73_011535	0.27	+0.0
2,532,151	+		TX73_011535	0.28	-0.0
2,532,166	+		TX73_011535	0.28	-0.0
2,532,172	-		TX73_011535	0.29	+1.0
2,532,178	+		TX73_011535	0.29	-0.6
2,532,178	+		TX73_011535	0.29	-0.1
2,532,193	-		TX73_011535	0.30	-0.6
2,532,287	-		TX73_011535	0.34	-0.7
2,532,324	-		TX73_011535	0.36	-0.4
2,532,377	-		TX73_011535	0.39	-0.5
2,532,383	+		TX73_011535	0.39	-0.4
2,532,386	-		TX73_011535	0.39	-0.1
2,532,403	+		TX73_011535	0.40	+0.3
2,532,404	+		TX73_011535	0.40	-0.9
2,532,406	-		TX73_011535	0.40	+0.5
2,532,430	+		TX73_011535	0.42	-0.1
2,532,431	+		TX73_011535	0.42	-0.8
2,532,438	-		TX73_011535	0.42	-1.2
2,532,464	-		TX73_011535	0.43	+0.8
2,532,474	-		TX73_011535	0.44	+0.4
2,532,496	-		TX73_011535	0.45	-0.0
2,532,512	-		TX73_011535	0.46	+0.3
2,532,514	-		TX73_011535	0.46	+0.1
2,532,514	-		TX73_011535	0.46	+0.2
2,532,518	-		TX73_011535	0.46	+0.1
2,532,518	-		TX73_011535	0.46	-0.3
2,532,543	+		TX73_011535	0.47	-0.8
2,532,598	+		TX73_011535	0.50	+0.2
2,532,636	-		TX73_011535	0.52	+0.3
2,532,666	+		TX73_011535	0.53	-0.9
2,532,724	+		TX73_011535	0.56	-0.1
2,532,730	-		TX73_011535	0.57	-0.7
2,532,730	-		TX73_011535	0.57	-0.6
2,532,732	-		TX73_011535	0.57	+0.2
2,532,768	-		TX73_011535	0.58	-0.6
2,532,854	-		TX73_011535	0.63	-0.0
2,532,936	+		TX73_011535	0.67	-0.4
2,532,936	+		TX73_011535	0.67	-1.0
2,532,936	+		TX73_011535	0.67	+0.0
2,532,936	+		TX73_011535	0.67	+0.7
2,532,944	-		TX73_011535	0.67	+0.5
2,532,944	-		TX73_011535	0.67	-0.3
2,532,944	-		TX73_011535	0.67	+0.1
2,532,956	+		TX73_011535	0.68	-0.8
2,532,968	+		TX73_011535	0.68	-0.3
2,532,968	+		TX73_011535	0.68	+0.2
2,532,968	+		TX73_011535	0.68	-0.3
2,532,970	+		TX73_011535	0.69	-0.2
2,532,976	-		TX73_011535	0.69	+0.4
2,532,976	-		TX73_011535	0.69	+0.2
2,532,976	-		TX73_011535	0.69	-0.6
2,532,976	-		TX73_011535	0.69	-0.0
2,532,976	-		TX73_011535	0.69	-1.1
2,532,978	+		TX73_011535	0.69	+0.0
2,532,988	+		TX73_011535	0.69	+0.8
2,533,007	-		TX73_011535	0.70	-0.2
2,533,014	-		TX73_011535	0.71	+0.1
2,533,055	-		TX73_011535	0.73	-0.1
2,533,069	-		TX73_011535	0.74	-0.3
2,533,085	-		TX73_011535	0.74	-1.0
2,533,096	+		TX73_011535	0.75	+0.4
2,533,096	+		TX73_011535	0.75	-0.0
2,533,112	-		TX73_011535	0.76	-0.8
2,533,117	-		TX73_011535	0.76	+0.0
2,533,130	+		TX73_011535	0.77	-0.3
2,533,265	-		TX73_011535	0.83	-0.1
2,533,265	-		TX73_011535	0.83	-0.5
2,533,265	-		TX73_011535	0.83	-0.7
2,533,284	-		TX73_011535	0.84	-0.4
2,533,307	-		TX73_011535	0.85	+0.1
2,533,344	+		TX73_011535	0.87	-0.1
2,533,352	-		TX73_011535	0.88	-0.5
2,533,352	-		TX73_011535	0.88	-1.3
2,533,361	-		TX73_011535	0.88	-0.2
2,533,371	-		TX73_011535	0.89	+0.9
2,533,395	-		TX73_011535	0.90	-0.2
2,533,395	-		TX73_011535	0.90	-0.1
2,533,430	+				+0.3
2,533,477	-				-1.0
2,533,491	-				-0.4
2,533,500	-				-0.5
2,533,521	-				-0.4
2,533,528	+				-1.4
2,533,528	+				-0.3
2,533,540	+				+0.2
2,533,540	+				+0.1
2,533,562	+				-0.0
2,533,635	-				-0.1
2,533,685	-				+0.6
2,533,690	-				+0.5
2,533,691	+				+0.1
2,533,691	+				-0.8
2,533,699	-				-0.7
2,533,711	-				-2.0
2,533,757	-				-0.2
2,533,762	+				+0.5
2,533,777	+				-0.2
2,533,844	-				+0.1
2,533,844	-				-0.4
2,533,867	+				+0.3
2,533,870	+				-0.0
2,533,892	+		TX73_011540	0.10	-1.0
2,533,893	+		TX73_011540	0.10	-0.0
2,533,919	+		TX73_011540	0.12	-0.6
2,533,955	+		TX73_011540	0.14	+0.4
2,533,961	+		TX73_011540	0.14	-0.5
2,533,968	+		TX73_011540	0.15	+1.0
2,533,969	+		TX73_011540	0.15	-0.1
2,533,969	-		TX73_011540	0.15	-0.2
2,533,970	-		TX73_011540	0.15	+0.0
2,534,063	+		TX73_011540	0.20	+0.3
2,534,071	-		TX73_011540	0.21	+0.1
2,534,147	+		TX73_011540	0.25	-0.4
2,534,171	-		TX73_011540	0.26	-1.1
2,534,227	-		TX73_011540	0.29	-0.6
2,534,247	+		TX73_011540	0.31	-0.2
2,534,296	-		TX73_011540	0.33	-0.6
2,534,297	-		TX73_011540	0.33	-0.1
2,534,310	-		TX73_011540	0.34	-0.2
2,534,370	+		TX73_011540	0.38	-1.9
2,534,522	+		TX73_011540	0.46	-1.5
2,534,561	-		TX73_011540	0.48	-0.5
2,534,574	-		TX73_011540	0.49	-0.5