Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_014910

Experiment: PM with succinate aerobic in dark

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PM with succinate aerobic in dark
3,253,749	+		TX73_014905	0.33	-0.5
3,253,755	+		TX73_014905	0.34	+0.6
3,253,757	-		TX73_014905	0.34	+0.4
3,253,771	-		TX73_014905	0.35	+0.8
3,253,796	+		TX73_014905	0.37	+0.0
3,253,796	+		TX73_014905	0.37	+1.2
3,253,814	-		TX73_014905	0.38	-0.3
3,253,830	+		TX73_014905	0.39	+0.5
3,253,830	+		TX73_014905	0.39	+0.1
3,253,847	-		TX73_014905	0.40	-0.8
3,253,853	+		TX73_014905	0.40	+0.6
3,253,853	+		TX73_014905	0.40	-0.1
3,253,858	+		TX73_014905	0.41	+0.5
3,253,861	-		TX73_014905	0.41	+0.6
3,253,866	-		TX73_014905	0.41	+1.1
3,253,866	-		TX73_014905	0.41	+0.8
3,253,872	+		TX73_014905	0.42	+0.5
3,253,872	+		TX73_014905	0.42	+0.4
3,253,891	-		TX73_014905	0.43	+0.0
3,253,891	-		TX73_014905	0.43	-0.4
3,253,930	+		TX73_014905	0.45	+0.3
3,253,956	+		TX73_014905	0.47	+0.0
3,254,052	+		TX73_014905	0.54	+0.0
3,254,068	-		TX73_014905	0.55	-0.2
3,254,080	+		TX73_014905	0.55	+0.9
3,254,106	+		TX73_014905	0.57	+0.6
3,254,137	+		TX73_014905	0.59	-0.8
3,254,137	+		TX73_014905	0.59	-0.4
3,254,137	+		TX73_014905	0.59	+0.1
3,254,145	-		TX73_014905	0.60	+0.2
3,254,163	-		TX73_014905	0.61	-1.0
3,254,163	-		TX73_014905	0.61	-0.3
3,254,171	+		TX73_014905	0.61	+1.5
3,254,205	-		TX73_014905	0.64	+0.3
3,254,223	-		TX73_014905	0.65	+0.7
3,254,264	+		TX73_014905	0.68	+0.0
3,254,305	-		TX73_014905	0.70	+0.1
3,254,306	-		TX73_014905	0.70	+0.2
3,254,344	+		TX73_014905	0.73	+0.4
3,254,344	-		TX73_014905	0.73	-0.4
3,254,349	+		TX73_014905	0.73	-0.2
3,254,374	+		TX73_014905	0.75	-0.2
3,254,406	+		TX73_014905	0.77	-0.8
3,254,406	+		TX73_014905	0.77	+0.2
3,254,406	+		TX73_014905	0.77	-1.0
3,254,406	+		TX73_014905	0.77	-0.1
3,254,414	-		TX73_014905	0.78	-0.3
3,254,414	-		TX73_014905	0.78	-0.5
3,254,414	-		TX73_014905	0.78	+0.5
3,254,414	-		TX73_014905	0.78	+0.4
3,254,424	+		TX73_014905	0.78	+0.6
3,254,424	+		TX73_014905	0.78	-0.6
3,254,432	-		TX73_014905	0.79	+0.5
3,254,442	+		TX73_014905	0.79	-0.2
3,254,478	-		TX73_014905	0.82	-0.5
3,254,523	-		TX73_014905	0.85	-0.4
3,254,537	+		TX73_014905	0.86	+1.1
3,254,538	+		TX73_014905	0.86	+0.0
3,254,538	+		TX73_014905	0.86	+0.5
3,254,546	-		TX73_014905	0.86	-0.2
3,254,546	-		TX73_014905	0.86	-0.4
3,254,572	+		TX73_014905	0.88	-0.7
3,254,574	+		TX73_014905	0.88	+0.4
3,254,587	-		TX73_014905	0.89	-0.9
3,254,606	+				-0.1
3,254,636	+				+0.3
3,254,648	+				-0.6
3,254,648	+				+0.2
3,254,648	+				+1.2
3,254,651	-				+0.3
3,254,724	+				+0.2
3,254,771	-				+0.4
3,254,791	+				-1.3
3,254,801	-				+0.6
3,254,825	-				+0.2
3,254,870	-				-0.5
3,254,891	-				+0.3
3,254,900	+				-0.3
3,254,908	-				-1.1
3,254,919	+				+0.4
3,254,924	+				-0.8
3,254,996	-		TX73_014910	0.12	+0.4
3,254,997	+		TX73_014910	0.12	+0.1
3,255,023	-		TX73_014910	0.13	+0.6
3,255,023	-		TX73_014910	0.13	+0.6
3,255,071	+		TX73_014910	0.15	-0.0
3,255,079	-		TX73_014910	0.16	+0.2
3,255,112	+		TX73_014910	0.17	-0.4
3,255,172	+		TX73_014910	0.20	+0.5
3,255,221	-		TX73_014910	0.22	+0.0
3,255,245	-		TX73_014910	0.23	+0.0
3,255,265	+		TX73_014910	0.24	+0.1
3,255,279	+		TX73_014910	0.25	-0.1
3,255,279	+		TX73_014910	0.25	+1.0
3,255,301	+		TX73_014910	0.26	-1.3
3,255,304	-		TX73_014910	0.26	-0.3
3,255,340	+		TX73_014910	0.28	+0.0
3,255,348	-		TX73_014910	0.28	+0.7
3,255,371	-		TX73_014910	0.29	-0.1
3,255,378	-		TX73_014910	0.30	-1.5
3,255,391	+		TX73_014910	0.30	+0.5
3,255,399	-		TX73_014910	0.30	-0.2
3,255,399	-		TX73_014910	0.30	+0.3
3,255,401	+		TX73_014910	0.31	-0.7
3,255,411	+		TX73_014910	0.31	+0.0
3,255,457	+		TX73_014910	0.33	+1.1
3,255,512	+		TX73_014910	0.36	-0.0
3,255,520	-		TX73_014910	0.36	+0.1
3,255,520	-		TX73_014910	0.36	-0.2
3,255,520	-		TX73_014910	0.36	-1.9
3,255,520	-		TX73_014910	0.36	+0.1
3,255,540	-		TX73_014910	0.37	+1.5
3,255,542	-		TX73_014910	0.37	+0.1
3,255,592	-		TX73_014910	0.39	-0.1
3,255,615	+		TX73_014910	0.40	+1.3
3,255,623	-		TX73_014910	0.41	+0.2
3,255,690	+		TX73_014910	0.44	+0.3
3,255,725	-		TX73_014910	0.46	-0.2
3,255,780	-		TX73_014910	0.48	+0.3
3,255,796	+		TX73_014910	0.49	-1.0
3,255,796	+		TX73_014910	0.49	+0.2
3,255,804	-		TX73_014910	0.49	+0.5
3,255,814	+		TX73_014910	0.50	+0.3
3,255,814	+		TX73_014910	0.50	+0.1
3,255,822	-		TX73_014910	0.50	-0.6
3,255,853	+		TX73_014910	0.51	+0.3
3,255,875	+		TX73_014910	0.52	-0.8
3,255,879	+		TX73_014910	0.53	-0.4
3,255,907	+		TX73_014910	0.54	+0.0
3,255,917	+		TX73_014910	0.54	-0.4
3,256,031	-		TX73_014910	0.60	+0.1
3,256,073	-		TX73_014910	0.62	+0.7
3,256,075	+		TX73_014910	0.62	+0.5
3,256,080	+		TX73_014910	0.62	+0.2
3,256,099	+		TX73_014910	0.63	-0.3
3,256,101	+		TX73_014910	0.63	+1.0
3,256,101	+		TX73_014910	0.63	-0.3
3,256,136	-		TX73_014910	0.64	-1.4
3,256,177	-		TX73_014910	0.66	+0.2
3,256,190	-		TX73_014910	0.67	-0.3
3,256,191	-		TX73_014910	0.67	+2.1
3,256,237	-		TX73_014910	0.69	+0.3
3,256,248	+		TX73_014910	0.70	-0.6
3,256,248	+		TX73_014910	0.70	-0.3
3,256,262	+		TX73_014910	0.70	-1.0
3,256,266	-		TX73_014910	0.70	-0.5
3,256,292	+		TX73_014910	0.72	-0.1
3,256,337	-		TX73_014910	0.74	-0.4
3,256,359	-		TX73_014910	0.75	+0.6
3,256,361	+		TX73_014910	0.75	+0.1
3,256,410	-		TX73_014910	0.77	+0.4
3,256,416	+		TX73_014910	0.77	+0.8
3,256,448	+		TX73_014910	0.79	-0.2
3,256,456	-		TX73_014910	0.79	-1.0
3,256,456	-		TX73_014910	0.79	-0.5
3,256,461	-		TX73_014910	0.80	+0.9
3,256,541	+		TX73_014910	0.83	+0.4
3,256,789	+				+0.6
3,256,797	-				+0.0
3,256,822	+				-0.2
3,256,823	-				+0.3
3,256,874	+				-1.7
3,256,882	-				-1.4
3,256,893	-				-0.3
3,256,904	+				+0.8
3,256,904	+				-1.6
3,256,945	+				-0.9
3,256,953	-				+0.6
3,256,968	+				+0.2
3,256,980	+				+0.9
3,256,980	+				-0.7
3,256,980	+				+0.7
3,256,997	+				-0.7
3,257,032	+		TX73_014915	0.11	-0.6
3,257,053	+		TX73_014915	0.12	-1.3
3,257,068	-		TX73_014915	0.14	-0.2
3,257,125	+		TX73_014915	0.18	+0.1
3,257,125	+		TX73_014915	0.18	-0.4
3,257,133	-		TX73_014915	0.19	+0.2
3,257,133	-		TX73_014915	0.19	+0.5
3,257,133	-		TX73_014915	0.19	+0.0
3,257,140	-		TX73_014915	0.19	+0.8
3,257,143	+		TX73_014915	0.20	+1.3
3,257,167	+		TX73_014915	0.22	+0.5
3,257,245	-		TX73_014915	0.28	-0.7
3,257,346	+		TX73_014915	0.36	+0.1
3,257,359	-		TX73_014915	0.37	+1.2
3,257,372	+		TX73_014915	0.38	-1.0
3,257,534	+		TX73_014915	0.52	+0.5
3,257,591	+		TX73_014915	0.56	+0.4
3,257,607	-		TX73_014915	0.58	-0.9
3,257,695	+		TX73_014915	0.65	-0.9
3,257,713	-		TX73_014915	0.66	+0.9
3,257,750	+		TX73_014915	0.69	-0.9
3,257,781	-		TX73_014915	0.72	+0.4
3,257,798	-		TX73_014915	0.73	+0.2
3,257,810	+		TX73_014915	0.74	+0.3
3,257,845	+		TX73_014915	0.77	-0.9
3,257,892	+		TX73_014915	0.81	+0.3