Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_024915

Experiment: PM with Formate and Sodium bicarbonate anaerobic with light

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PM with Formate and Sodium bicarbonate anaerobic with light
5,411,654	-		TX73_024910	0.34	+0.1
5,411,656	+		TX73_024910	0.34	-0.4
5,411,665	-		TX73_024910	0.34	+0.1
5,411,685	+		TX73_024910	0.36	-0.2
5,411,735	+		TX73_024910	0.39	-0.5
5,411,756	-		TX73_024910	0.41	+0.1
5,411,769	-		TX73_024910	0.42	+0.8
5,411,798	+		TX73_024910	0.44	-0.3
5,411,816	+		TX73_024910	0.45	-0.1
5,411,816	+		TX73_024910	0.45	+0.7
5,411,920	-		TX73_024910	0.52	-0.8
5,411,921	+		TX73_024910	0.53	-0.1
5,411,928	+		TX73_024910	0.53	-0.7
5,411,937	+		TX73_024910	0.54	+0.0
5,411,965	+		TX73_024910	0.56	-0.1
5,411,965	+		TX73_024910	0.56	-1.8
5,411,982	-		TX73_024910	0.57	-0.1
5,411,989	+		TX73_024910	0.57	-0.0
5,411,994	+		TX73_024910	0.58	-0.1
5,412,008	+		TX73_024910	0.59	-0.5
5,412,013	+		TX73_024910	0.59	-1.6
5,412,013	+		TX73_024910	0.59	-1.1
5,412,021	-		TX73_024910	0.60	-0.2
5,412,033	+		TX73_024910	0.60	+0.7
5,412,041	-		TX73_024910	0.61	+0.4
5,412,081	-		TX73_024910	0.64	+0.0
5,412,113	-		TX73_024910	0.66	+0.7
5,412,118	-		TX73_024910	0.67	+0.0
5,412,118	-		TX73_024910	0.67	+0.1
5,412,149	+		TX73_024910	0.69	+0.1
5,412,156	-		TX73_024910	0.69	+0.7
5,412,167	-		TX73_024910	0.70	-0.1
5,412,207	+		TX73_024910	0.73	+0.9
5,412,212	+		TX73_024910	0.73	-0.1
5,412,214	-		TX73_024910	0.73	-0.3
5,412,220	-		TX73_024910	0.74	+0.9
5,412,261	-		TX73_024910	0.77	+0.6
5,412,264	-		TX73_024910	0.77	-0.2
5,412,273	+		TX73_024910	0.78	-0.6
5,412,347	-		TX73_024910	0.83	-0.1
5,412,368	+		TX73_024910	0.84	-0.8
5,412,382	-		TX73_024910	0.85	-0.8
5,412,399	+		TX73_024910	0.86	+0.6
5,412,408	-		TX73_024910	0.87	-0.4
5,412,422	+		TX73_024910	0.88	-0.3
5,412,422	+		TX73_024910	0.88	-0.0
5,412,430	-		TX73_024910	0.89	+0.2
5,412,430	-		TX73_024910	0.89	-1.2
5,412,443	-		TX73_024910	0.90	-0.8
5,412,447	+		TX73_024910	0.90	-1.5
5,412,455	-				-0.3
5,412,462	+				-0.2
5,412,462	+				+0.1
5,412,527	+				+1.6
5,412,592	+				-2.1
5,412,592	+				+0.9
5,412,600	-				+0.2
5,412,607	-				+0.2
5,412,607	-				+0.5
5,412,611	+				-0.2
5,412,612	-				+1.6
5,412,612	-				-0.1
5,412,619	-				-0.3
5,412,619	-				-2.3
5,412,648	+				-0.3
5,412,656	+				+0.1
5,412,661	+				-0.5
5,412,664	-				-0.4
5,412,681	-				-0.7
5,412,689	-				-0.1
5,412,689	-				+0.3
5,412,689	-				+0.2
5,412,715	+		TX73_024915	0.11	+0.7
5,412,715	+		TX73_024915	0.11	-0.4
5,412,758	+		TX73_024915	0.15	-0.3
5,412,794	-		TX73_024915	0.19	+0.4
5,412,799	-		TX73_024915	0.19	+0.3
5,412,809	-		TX73_024915	0.20	+0.2
5,412,829	+		TX73_024915	0.22	-0.8
5,412,834	+		TX73_024915	0.22	-0.6
5,412,837	-		TX73_024915	0.23	-0.4
5,412,837	-		TX73_024915	0.23	-1.1
5,412,837	-		TX73_024915	0.23	-0.4
5,412,856	+		TX73_024915	0.25	-0.4
5,412,883	-		TX73_024915	0.27	-0.2
5,412,885	+		TX73_024915	0.28	+0.2
5,412,952	-		TX73_024915	0.34	+0.2
5,412,959	-		TX73_024915	0.35	-0.2
5,412,969	+		TX73_024915	0.36	-0.4
5,413,015	+		TX73_024915	0.40	+1.1
5,413,016	-		TX73_024915	0.41	-0.5
5,413,023	-		TX73_024915	0.41	+0.4
5,413,023	-		TX73_024915	0.41	+0.3
5,413,023	-		TX73_024915	0.41	-0.1
5,413,038	-		TX73_024915	0.43	-0.9
5,413,076	+		TX73_024915	0.47	-0.5
5,413,076	-		TX73_024915	0.47	+0.0
5,413,082	+		TX73_024915	0.47	-0.4
5,413,113	+		TX73_024915	0.50	+0.6
5,413,119	-		TX73_024915	0.51	+0.4
5,413,123	+		TX73_024915	0.51	-0.2
5,413,309	+		TX73_024915	0.70	+0.7
5,413,310	-		TX73_024915	0.70	+0.4
5,413,325	+		TX73_024915	0.71	+0.4
5,413,396	+		TX73_024915	0.78	+0.0
5,413,404	-		TX73_024915	0.79	-0.3
5,413,411	+		TX73_024915	0.80	-0.9
5,413,411	+		TX73_024915	0.80	-0.0
5,413,411	+		TX73_024915	0.80	-1.1
5,413,411	+		TX73_024915	0.80	-0.1
5,413,411	+		TX73_024915	0.80	+0.7
5,413,411	+		TX73_024915	0.80	+0.2
5,413,413	+		TX73_024915	0.80	+0.0
5,413,419	-		TX73_024915	0.81	-0.0
5,413,419	-		TX73_024915	0.81	-0.2
5,413,419	-		TX73_024915	0.81	-1.3
5,413,419	-		TX73_024915	0.81	-0.6
5,413,419	-		TX73_024915	0.81	+0.6
5,413,419	-		TX73_024915	0.81	+0.4
5,413,419	-		TX73_024915	0.81	-0.8
5,413,419	-		TX73_024915	0.81	-0.3
5,413,419	-		TX73_024915	0.81	+0.1
5,413,459	+		TX73_024915	0.85	+1.1
5,413,484	+		TX73_024915	0.87	-1.2
5,413,535	-				-0.2
5,413,546	+				-0.7
5,413,546	+				-0.2
5,413,546	+				+0.0
5,413,546	+				-0.4
5,413,546	+				-0.5
5,413,554	-				-0.2
5,413,554	-				+0.4
5,413,554	-				+1.4
5,413,554	-				+0.3
5,413,554	-				-0.0
5,413,571	-				-0.4
5,413,589	+				+0.1
5,413,615	-				-0.1
5,413,644	-		TX73_024920	0.27	+0.2
5,413,651	+		TX73_024920	0.32	-0.5
5,413,729	+				-0.2
5,413,734	+				-0.1
5,413,734	+				-0.0
5,413,742	-				-1.4
5,413,742	-				-0.2
5,413,804	+				+0.6
5,413,824	+				-0.4
5,413,837	-				-0.1
5,413,837	-				+0.4
5,413,858	-		TX73_024925	0.13	+0.4
5,413,890	-		TX73_024925	0.18	-1.8
5,413,962	-		TX73_024925	0.30	+0.4
5,413,979	+		TX73_024925	0.33	-0.2
5,413,988	-		TX73_024925	0.35	-0.2
5,413,999	+		TX73_024925	0.37	+0.7
5,413,999	+		TX73_024925	0.37	-0.7
5,413,999	+		TX73_024925	0.37	+0.2
5,414,011	-		TX73_024925	0.39	+0.3
5,414,029	-		TX73_024925	0.42	-0.2
5,414,033	+		TX73_024925	0.42	+0.9
5,414,054	-		TX73_024925	0.46	+1.4
5,414,056	+		TX73_024925	0.46	-0.2
5,414,061	+		TX73_024925	0.47	-0.1
5,414,069	-		TX73_024925	0.48	+0.1
5,414,079	+		TX73_024925	0.50	-0.8
5,414,081	+		TX73_024925	0.50	-0.3
5,414,081	+		TX73_024925	0.50	-0.5
5,414,141	+		TX73_024925	0.60	-0.4
5,414,147	+		TX73_024925	0.61	-1.9
5,414,213	+		TX73_024925	0.73	-0.6
5,414,239	+		TX73_024925	0.77	+1.0
5,414,247	-		TX73_024925	0.78	-0.4
5,414,284	+		TX73_024925	0.85	-0.5
5,414,284	+		TX73_024925	0.85	+1.2
5,414,307	-		TX73_024925	0.88	-0.8
5,414,307	-		TX73_024925	0.88	+0.9
5,414,338	+				+0.6
5,414,346	-				-0.5
5,414,370	-				-0.3
5,414,436	+				-0.7
5,414,437	+				-0.0
5,414,498	+				-1.4
5,414,506	-				-0.6
5,414,506	-				+0.1
5,414,516	-				+1.4
5,414,521	+				-0.5
5,414,548	+		TX73_024930	0.12	-0.0
5,414,548	+		TX73_024930	0.12	-0.1
5,414,551	+		TX73_024930	0.12	+0.1
5,414,554	-		TX73_024930	0.13	+1.1
5,414,556	-		TX73_024930	0.13	+0.4
5,414,556	-		TX73_024930	0.13	-1.1
5,414,556	-		TX73_024930	0.13	-0.9
5,414,577	+		TX73_024930	0.15	-0.2
5,414,606	-		TX73_024930	0.18	-0.1