Experiment: Benzoate (C), sodium fluoride stress
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt TX73_005665 and TX73_005670 are separated by 7 nucleotides TX73_005670 and TX73_005675 are separated by 99 nucleotides
TX73_005665: TX73_005665 - Holliday junction branch migration DNA helicase RuvB, at 1,206,576 to 1,207,625
_005665
TX73_005670: TX73_005670 - tol-pal system-associated acyl-CoA thioesterase, at 1,207,633 to 1,208,097
_005670
TX73_005675: TX73_005675 - NAD(P)/FAD-dependent oxidoreductase, at 1,208,197 to 1,209,507
_005675
Position (kb) 1207
1208
1209 Strain fitness (log2 ratio) -2
-1
0
1 at 1207.700 kb on - strand, within TX73_005670 at 1207.774 kb on - strand, within TX73_005670 at 1207.779 kb on - strand, within TX73_005670 at 1207.879 kb on - strand, within TX73_005670 at 1207.916 kb on + strand, within TX73_005670 at 1207.947 kb on - strand, within TX73_005670 at 1207.972 kb on - strand, within TX73_005670 at 1207.985 kb on - strand, within TX73_005670 at 1208.001 kb on + strand, within TX73_005670 at 1208.015 kb on - strand, within TX73_005670 at 1208.021 kb on - strand, within TX73_005670 at 1208.021 kb on - strand, within TX73_005670 at 1208.021 kb on - strand, within TX73_005670 at 1208.094 kb on - strand at 1208.174 kb on - strand at 1208.191 kb on - strand at 1208.201 kb on + strand at 1208.224 kb on - strand at 1208.248 kb on - strand at 1208.300 kb on + strand at 1208.339 kb on - strand, within TX73_005675 at 1208.341 kb on + strand, within TX73_005675 at 1208.399 kb on + strand, within TX73_005675 at 1208.425 kb on - strand, within TX73_005675 at 1208.452 kb on + strand, within TX73_005675 at 1208.452 kb on + strand, within TX73_005675 at 1208.508 kb on - strand, within TX73_005675 at 1208.588 kb on + strand, within TX73_005675 at 1208.611 kb on - strand, within TX73_005675 at 1208.619 kb on - strand, within TX73_005675 at 1208.632 kb on - strand, within TX73_005675 at 1208.659 kb on + strand, within TX73_005675 at 1208.666 kb on - strand, within TX73_005675 at 1208.667 kb on - strand, within TX73_005675 at 1208.702 kb on + strand, within TX73_005675 at 1208.707 kb on + strand, within TX73_005675 at 1208.710 kb on - strand, within TX73_005675 at 1208.769 kb on + strand, within TX73_005675 at 1208.769 kb on + strand, within TX73_005675 at 1208.777 kb on - strand, within TX73_005675 at 1208.811 kb on + strand, within TX73_005675 at 1208.829 kb on + strand, within TX73_005675 at 1209.064 kb on + strand, within TX73_005675
Per-strain Table
Position Strand Gene LocusTag Fraction Benzoate (C), sodium fluoride stress remove 1,207,700 - TX73_005670 0.14 -0.5 1,207,774 - TX73_005670 0.30 -0.6 1,207,779 - TX73_005670 0.31 +0.2 1,207,879 - TX73_005670 0.53 +0.3 1,207,916 + TX73_005670 0.61 -0.9 1,207,947 - TX73_005670 0.68 -1.6 1,207,972 - TX73_005670 0.73 +0.4 1,207,985 - TX73_005670 0.76 -0.5 1,208,001 + TX73_005670 0.79 -0.1 1,208,015 - TX73_005670 0.82 +0.1 1,208,021 - TX73_005670 0.83 -0.1 1,208,021 - TX73_005670 0.83 -0.1 1,208,021 - TX73_005670 0.83 -0.2 1,208,094 - -0.6 1,208,174 - -0.4 1,208,191 - -0.4 1,208,201 + -0.8 1,208,224 - +1.0 1,208,248 - -2.3 1,208,300 + +0.0 1,208,339 - TX73_005675 0.11 -0.4 1,208,341 + TX73_005675 0.11 -0.5 1,208,399 + TX73_005675 0.15 +0.2 1,208,425 - TX73_005675 0.17 -1.0 1,208,452 + TX73_005675 0.19 -0.1 1,208,452 + TX73_005675 0.19 -1.6 1,208,508 - TX73_005675 0.24 -1.6 1,208,588 + TX73_005675 0.30 -0.8 1,208,611 - TX73_005675 0.32 -2.7 1,208,619 - TX73_005675 0.32 -0.9 1,208,632 - TX73_005675 0.33 -0.7 1,208,659 + TX73_005675 0.35 -0.2 1,208,666 - TX73_005675 0.36 -0.2 1,208,667 - TX73_005675 0.36 -0.1 1,208,702 + TX73_005675 0.39 +0.6 1,208,707 + TX73_005675 0.39 -0.4 1,208,710 - TX73_005675 0.39 -0.5 1,208,769 + TX73_005675 0.44 -1.4 1,208,769 + TX73_005675 0.44 -1.4 1,208,777 - TX73_005675 0.44 -0.7 1,208,811 + TX73_005675 0.47 -0.9 1,208,829 + TX73_005675 0.48 -0.9 1,209,064 + TX73_005675 0.66 -2.2
Or see this region's nucleotide sequence