Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_008600

Experiment: Benzoate (C), sodium fluoride stress

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Benzoate (C), sodium fluoride stress
1,857,459	-				-0.1
1,857,460	-				-2.1
1,857,531	+		TX73_008595	0.18	+0.5
1,857,531	+		TX73_008595	0.18	-0.6
1,857,539	-		TX73_008595	0.20	+0.4
1,857,587	-		TX73_008595	0.27	-0.6
1,857,641	-		TX73_008595	0.35	-0.2
1,857,737	-		TX73_008595	0.50	-0.2
1,857,737	-		TX73_008595	0.50	-0.3
1,857,787	-		TX73_008595	0.58	+0.0
1,857,860	+		TX73_008595	0.69	-0.0
1,857,868	-		TX73_008595	0.70	+0.2
1,857,897	-		TX73_008595	0.75	+0.3
1,857,897	-		TX73_008595	0.75	-0.4
1,857,897	-		TX73_008595	0.75	+1.1
1,857,934	-		TX73_008595	0.80	-0.3
1,857,936	+		TX73_008595	0.81	-0.7
1,857,949	+		TX73_008595	0.83	+0.1
1,857,960	-		TX73_008595	0.84	-0.0
1,857,982	+		TX73_008595	0.88	-0.7
1,857,982	+		TX73_008595	0.88	-0.5
1,857,982	+		TX73_008595	0.88	+0.4
1,857,999	+				+0.1
1,858,007	-				-0.4
1,858,084	+				-0.2
1,858,090	+				+0.2
1,858,166	+				-0.6
1,858,169	-				-0.3
1,858,172	+				+0.3
1,858,172	+				-0.5
1,858,175	-				+0.1
1,858,180	-				-0.5
1,858,219	+				+0.6
1,858,219	+				+0.0
1,858,227	-				-0.8
1,858,229	+				-0.1
1,858,238	+				-0.6
1,858,242	-				-1.2
1,858,284	+				-0.6
1,858,321	+				+0.1
1,858,329	+				-0.3
1,858,449	+				+0.3
1,858,457	-				-0.2
1,858,480	+				-0.1
1,858,491	-				+1.0
1,858,504	+				+0.7
1,858,510	+				+0.1
1,858,532	+				+0.0
1,858,532	+				-0.4
1,858,606	+				+0.1
1,858,621	-				-0.2
1,858,632	+				+0.3
1,858,733	+		TX73_008600	0.12	-0.3
1,858,741	-		TX73_008600	0.13	+0.2
1,858,741	-		TX73_008600	0.13	+0.5
1,858,843	+		TX73_008600	0.17	-0.7
1,858,874	+		TX73_008600	0.18	-0.4
1,858,905	+		TX73_008600	0.20	+0.0
1,858,905	+		TX73_008600	0.20	+1.1
1,858,913	-		TX73_008600	0.20	-0.4
1,858,959	-		TX73_008600	0.22	+0.1
1,858,963	-		TX73_008600	0.22	-0.4
1,858,963	-		TX73_008600	0.22	-0.5
1,858,964	-		TX73_008600	0.22	-0.8
1,858,981	+		TX73_008600	0.23	+0.3
1,858,988	+		TX73_008600	0.23	-0.4
1,859,025	+		TX73_008600	0.25	+0.5
1,859,058	-		TX73_008600	0.26	-0.5
1,859,058	-		TX73_008600	0.26	-0.4
1,859,119	-		TX73_008600	0.29	-0.2
1,859,125	+		TX73_008600	0.29	+0.5
1,859,163	+		TX73_008600	0.31	+1.5
1,859,163	+		TX73_008600	0.31	-0.0
1,859,210	+		TX73_008600	0.33	+0.0
1,859,218	-		TX73_008600	0.33	-1.0
1,859,228	-		TX73_008600	0.34	-0.5
1,859,228	-		TX73_008600	0.34	+0.2
1,859,233	-		TX73_008600	0.34	+0.4
1,859,239	-		TX73_008600	0.34	+0.8
1,859,251	-		TX73_008600	0.34	+0.3
1,859,295	+		TX73_008600	0.36	+0.0
1,859,295	-		TX73_008600	0.36	-0.3
1,859,295	-		TX73_008600	0.36	+0.1
1,859,297	-		TX73_008600	0.36	+0.0
1,859,302	-		TX73_008600	0.37	+0.6
1,859,302	-		TX73_008600	0.37	+0.5
1,859,305	+		TX73_008600	0.37	-0.2
1,859,305	+		TX73_008600	0.37	-0.2
1,859,305	+		TX73_008600	0.37	-0.0
1,859,305	+		TX73_008600	0.37	+1.5
1,859,334	-		TX73_008600	0.38	+0.2
1,859,396	-		TX73_008600	0.41	-0.2
1,859,419	+		TX73_008600	0.42	+0.1
1,859,446	-		TX73_008600	0.43	-1.1
1,859,496	+		TX73_008600	0.45	+0.0
1,859,496	+		TX73_008600	0.45	+0.4
1,859,549	-		TX73_008600	0.47	-0.0
1,859,608	-		TX73_008600	0.50	+0.3
1,859,629	+		TX73_008600	0.51	-0.2
1,859,634	+		TX73_008600	0.51	-0.1
1,859,634	+		TX73_008600	0.51	+0.4
1,859,652	-		TX73_008600	0.52	+0.1
1,859,675	-		TX73_008600	0.53	+0.5
1,859,692	-		TX73_008600	0.53	+1.3
1,859,697	-		TX73_008600	0.53	-0.6
1,859,704	+		TX73_008600	0.54	-0.5
1,859,721	-		TX73_008600	0.54	+0.2
1,859,734	-		TX73_008600	0.55	-0.1
1,859,823	-		TX73_008600	0.59	-1.0
1,859,853	-		TX73_008600	0.60	+0.3
1,859,935	+		TX73_008600	0.64	+0.5
1,860,034	+		TX73_008600	0.68	+0.2
1,860,087	+		TX73_008600	0.70	+0.4
1,860,232	+		TX73_008600	0.76	+1.0
1,860,232	+		TX73_008600	0.76	-0.5
1,860,235	-		TX73_008600	0.76	-0.5
1,860,272	+		TX73_008600	0.78	+0.2
1,860,281	-		TX73_008600	0.78	-0.6
1,860,288	+		TX73_008600	0.79	+0.0
1,860,326	-		TX73_008600	0.80	-0.0
1,860,379	-		TX73_008600	0.82	+0.7
1,860,379	-		TX73_008600	0.82	+0.8
1,860,386	-		TX73_008600	0.83	+0.1
1,860,402	-		TX73_008600	0.83	+0.2
1,860,426	-		TX73_008600	0.84	+0.0
1,860,433	+		TX73_008600	0.85	-0.6
1,860,433	+		TX73_008600	0.85	-0.2
1,860,459	-		TX73_008600	0.86	-0.8
1,860,469	+		TX73_008600	0.86	+1.8
1,860,568	+				+0.2
1,860,576	-				-0.3
1,860,581	+				+0.4
1,860,602	-				-0.2
1,860,661	-				-1.3
1,860,729	+				+1.8
1,860,739	-				+0.8
1,860,757	+				-0.3
1,860,757	+				-0.5
1,860,781	+				+0.4
1,860,785	+				-0.4
1,860,790	+				-0.0
1,860,790	+				-0.2
1,860,793	-				+0.6
1,860,798	-				-0.7
1,860,798	-				-1.3
1,860,809	-				+0.0
1,860,833	-				+0.2
1,860,840	+				+0.5
1,860,840	+				-1.3
1,860,840	+				-0.1
1,860,848	-				+0.7
1,860,848	-				+0.2
1,860,964	+				-0.1
1,860,973	+				+1.2
1,861,043	+		TX73_008605	0.15	-0.7
1,861,051	+		TX73_008605	0.16	-0.1
1,861,070	+		TX73_008605	0.20	+0.0
1,861,079	+		TX73_008605	0.22	-0.8
1,861,105	+		TX73_008605	0.27	-0.4
1,861,123	-		TX73_008605	0.31	-1.2
1,861,151	+		TX73_008605	0.36	+0.3
1,861,154	-		TX73_008605	0.37	+0.1
1,861,154	-		TX73_008605	0.37	-0.1
1,861,194	-		TX73_008605	0.45	-0.4
1,861,228	-		TX73_008605	0.51	-0.5
1,861,252	-		TX73_008605	0.56	+0.1
1,861,272	+		TX73_008605	0.60	-1.3
1,861,285	-		TX73_008605	0.63	+0.2
1,861,299	-		TX73_008605	0.65	+0.5
1,861,319	+		TX73_008605	0.69	+0.6
1,861,332	-		TX73_008605	0.72	-1.3
1,861,334	+		TX73_008605	0.72	+0.1
1,861,394	+		TX73_008605	0.84	-0.1
1,861,394	+		TX73_008605	0.84	-1.1
1,861,399	+		TX73_008605	0.85	-1.3
1,861,402	-		TX73_008605	0.86	-1.3
1,861,427	+				+1.0
1,861,434	+				+0.4
1,861,461	-				-1.2
1,861,535	+				+0.0
1,861,547	+				-1.2
1,861,560	-				+0.3
1,861,587	+				+0.4
1,861,598	+				-0.2
1,861,686	-				-1.5
1,861,716	-				+0.6
1,861,745	-				-2.4
1,861,771	-				-0.2