Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_023275

Experiment: 4-Hydroxybenzoate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxybenzoate (C)
5,056,140	-		TX73_023265	0.78	+0.0
5,056,228	+		TX73_023265	0.85	-0.2
5,056,247	+		TX73_023265	0.87	+0.3
5,056,247	+		TX73_023265	0.87	-1.3
5,056,254	+		TX73_023265	0.87	+0.5
5,056,255	-		TX73_023265	0.87	-0.6
5,056,262	-		TX73_023265	0.88	+0.0
5,056,262	-		TX73_023265	0.88	+0.2
5,056,263	-		TX73_023265	0.88	-0.3
5,056,267	-		TX73_023265	0.88	+0.1
5,056,272	-		TX73_023265	0.88	+0.4
5,056,274	+		TX73_023265	0.89	-0.1
5,056,293	+				-0.5
5,056,302	+				-1.3
5,056,302	+				-0.0
5,056,302	+				+0.1
5,056,310	-				-0.6
5,056,386	+				+0.1
5,056,389	+				-0.1
5,056,396	+				-0.1
5,056,396	+				-0.4
5,056,396	+				+0.7
5,056,404	-				-0.2
5,056,404	-				+0.2
5,056,404	-				-0.2
5,056,444	+		TX73_023270	0.11	-0.8
5,056,454	+		TX73_023270	0.12	-0.3
5,056,461	+		TX73_023270	0.14	+0.7
5,056,469	-		TX73_023270	0.15	+0.3
5,056,469	-		TX73_023270	0.15	-1.0
5,056,469	-		TX73_023270	0.15	+0.3
5,056,479	-		TX73_023270	0.17	+0.5
5,056,501	+		TX73_023270	0.21	-0.4
5,056,503	-		TX73_023270	0.22	+0.1
5,056,521	+		TX73_023270	0.25	-0.1
5,056,525	+		TX73_023270	0.26	+0.1
5,056,526	+		TX73_023270	0.26	-0.3
5,056,534	-		TX73_023270	0.27	+0.5
5,056,534	-		TX73_023270	0.27	+1.3
5,056,534	-		TX73_023270	0.27	+0.3
5,056,578	+		TX73_023270	0.36	-0.6
5,056,677	-		TX73_023270	0.54	+0.0
5,056,681	+		TX73_023270	0.55	-0.5
5,056,721	+		TX73_023270	0.62	+0.5
5,056,723	+		TX73_023270	0.63	-0.6
5,056,729	-		TX73_023270	0.64	-0.2
5,056,731	-		TX73_023270	0.64	+0.5
5,056,771	-		TX73_023270	0.72	+0.7
5,056,777	+		TX73_023270	0.73	+0.2
5,056,790	+		TX73_023270	0.75	+0.8
5,056,792	+		TX73_023270	0.75	-0.3
5,056,796	-		TX73_023270	0.76	-0.4
5,056,800	-		TX73_023270	0.77	-0.2
5,056,853	+		TX73_023270	0.87	+0.4
5,056,861	-		TX73_023270	0.88	+1.0
5,056,861	-		TX73_023270	0.88	+0.7
5,056,890	+				+0.2
5,056,919	+				-0.0
5,056,926	+				-0.0
5,056,933	+				-0.6
5,056,963	+				+0.7
5,056,971	-				-0.2
5,056,971	-				+0.3
5,056,971	-				+0.1
5,056,971	-				+0.9
5,056,971	-				-0.0
5,056,989	-				+1.2
5,056,996	+				-1.2
5,057,137	+				+0.3
5,057,142	+				+0.8
5,057,150	-				+0.4
5,057,150	-				-0.0
5,057,193	-				+0.5
5,057,243	-		TX73_023275	0.12	-0.3
5,057,275	+		TX73_023275	0.14	-0.6
5,057,275	-		TX73_023275	0.14	-0.0
5,057,285	+		TX73_023275	0.15	-0.5
5,057,298	-		TX73_023275	0.16	-0.2
5,057,323	+		TX73_023275	0.18	+0.6
5,057,411	-		TX73_023275	0.25	+0.2
5,057,413	-		TX73_023275	0.25	+0.2
5,057,444	-		TX73_023275	0.28	-1.4
5,057,489	+		TX73_023275	0.31	-0.4
5,057,508	+		TX73_023275	0.33	-0.5
5,057,607	-		TX73_023275	0.40	-0.8
5,057,612	-		TX73_023275	0.41	-0.9
5,057,673	+		TX73_023275	0.45	-0.9
5,057,704	-		TX73_023275	0.48	-0.2
5,057,704	-		TX73_023275	0.48	-0.1
5,057,715	+		TX73_023275	0.49	-0.1
5,057,723	-		TX73_023275	0.49	-0.7
5,057,749	+		TX73_023275	0.51	-1.1
5,057,773	+		TX73_023275	0.53	-0.6
5,057,876	-		TX73_023275	0.61	-0.5
5,057,932	-		TX73_023275	0.66	+0.2
5,057,952	+		TX73_023275	0.67	+0.2
5,057,952	-		TX73_023275	0.67	-1.3
5,057,993	-		TX73_023275	0.71	-0.2
5,057,995	+		TX73_023275	0.71	-0.2
5,058,005	+		TX73_023275	0.72	-0.8
5,058,013	-		TX73_023275	0.72	-0.4
5,058,018	-		TX73_023275	0.73	+0.6
5,058,134	+		TX73_023275	0.82	+0.3
5,058,150	+		TX73_023275	0.83	-0.6
5,058,176	-		TX73_023275	0.85	-0.1
5,058,263	-				+0.8
5,058,283	+				-0.4
5,058,294	-				+1.1
5,058,301	-				-0.1
5,058,322	+				-0.9
5,058,340	-				+0.3
5,058,346	-				-0.4
5,058,447	-		TX73_023280	0.13	+0.4
5,058,510	-		TX73_023280	0.25	-0.4
5,058,510	-		TX73_023280	0.25	-1.1
5,058,531	+		TX73_023280	0.29	+0.1
5,058,546	-		TX73_023280	0.31	-0.3
5,058,593	+		TX73_023280	0.40	+0.2
5,058,601	-		TX73_023280	0.42	-0.4
5,058,631	+		TX73_023280	0.47	-0.8
5,058,672	+		TX73_023280	0.55	+0.0
5,058,690	+		TX73_023280	0.58	-0.5
5,058,692	+		TX73_023280	0.59	-0.7
5,058,692	+		TX73_023280	0.59	+0.5
5,058,700	+		TX73_023280	0.60	-0.0
5,058,703	+		TX73_023280	0.61	-0.6
5,058,712	+		TX73_023280	0.63	+1.0
5,058,712	+		TX73_023280	0.63	-0.3
5,058,712	+		TX73_023280	0.63	-0.4
5,058,720	-		TX73_023280	0.64	+0.5
5,058,720	-		TX73_023280	0.64	-0.5
5,058,731	+		TX73_023280	0.66	-0.6
5,058,742	-		TX73_023280	0.68	-0.1
5,058,781	-		TX73_023280	0.75	-0.9
5,058,786	-		TX73_023280	0.76	+0.6
5,058,807	-		TX73_023280	0.80	+0.7
5,058,807	-		TX73_023280	0.80	-0.0
5,058,807	-		TX73_023280	0.80	+0.2
5,058,817	+		TX73_023280	0.82	-0.3
5,058,825	-		TX73_023280	0.84	-0.5
5,058,825	-		TX73_023280	0.84	+0.6
5,058,825	-		TX73_023280	0.84	-0.0
5,058,825	-		TX73_023280	0.84	-0.6
5,058,844	+		TX73_023280	0.87	+0.4
5,058,852	-		TX73_023280	0.89	+0.8
5,058,868	+				+1.3
5,058,881	+				-0.3
5,058,886	+				-0.9
5,058,889	-				-0.1
5,059,037	+				+1.1
5,059,047	+				+0.3
5,059,055	-				-0.6
5,059,055	-				-0.0
5,059,055	-				-0.3
5,059,055	-				-0.1
5,059,121	+				-0.6
5,059,130	+				+0.1
5,059,138	-				-0.7
5,059,198	-				-0.1
5,059,228	+		TX73_023285	0.12	+0.8
5,059,238	-		TX73_023285	0.13	-0.6
5,059,260	+		TX73_023285	0.15	+0.5
5,059,261	-		TX73_023285	0.15	-0.0
5,059,317	-		TX73_023285	0.20	+0.9
5,059,323	+		TX73_023285	0.21	-1.5
5,059,323	+		TX73_023285	0.21	+0.4
5,059,328	+		TX73_023285	0.21	+0.1
5,059,331	-		TX73_023285	0.22	+0.3
5,059,333	+		TX73_023285	0.22	-0.3
5,059,335	-		TX73_023285	0.22	-0.7
5,059,350	+		TX73_023285	0.23	+0.6
5,059,350	-		TX73_023285	0.23	-0.1
5,059,352	+		TX73_023285	0.23	+0.3
5,059,352	+		TX73_023285	0.23	+0.6