Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_024780

Experiment: 4-Hydroxybenzoate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxybenzoate (C)
5,381,354	-		TX73_024775	0.35	-3.3
5,381,368	-		TX73_024775	0.37	-2.8
5,381,370	+		TX73_024775	0.37	-3.2
5,381,402	-		TX73_024775	0.39	-4.0
5,381,426	+		TX73_024775	0.41	-2.1
5,381,490	+		TX73_024775	0.47	-1.1
5,381,498	-		TX73_024775	0.47	-3.0
5,381,513	-		TX73_024775	0.49	-4.1
5,381,554	-		TX73_024775	0.52	-3.1
5,381,561	-		TX73_024775	0.53	-2.8
5,381,578	-		TX73_024775	0.54	-0.4
5,381,582	+		TX73_024775	0.54	-2.2
5,381,592	+		TX73_024775	0.55	-3.5
5,381,594	+		TX73_024775	0.55	-3.5
5,381,595	-		TX73_024775	0.55	-2.6
5,381,608	-		TX73_024775	0.56	-0.2
5,381,614	+		TX73_024775	0.57	-2.9
5,381,647	+		TX73_024775	0.60	-0.6
5,381,655	-		TX73_024775	0.60	-3.2
5,381,669	-		TX73_024775	0.61	-4.4
5,381,704	-		TX73_024775	0.64	-2.6
5,381,712	-		TX73_024775	0.65	-3.7
5,381,714	-		TX73_024775	0.65	-3.1
5,381,750	+		TX73_024775	0.68	-0.9
5,381,779	-		TX73_024775	0.71	-0.9
5,381,805	-		TX73_024775	0.73	-3.4
5,381,808	+		TX73_024775	0.73	-1.7
5,381,816	-		TX73_024775	0.74	-1.2
5,381,838	-		TX73_024775	0.75	-2.7
5,381,848	+		TX73_024775	0.76	-2.4
5,381,848	+		TX73_024775	0.76	-2.9
5,381,872	-		TX73_024775	0.78	-1.4
5,381,872	-		TX73_024775	0.78	+0.2
5,381,877	-		TX73_024775	0.79	-3.2
5,381,883	-		TX73_024775	0.79	-3.3
5,381,883	-		TX73_024775	0.79	-2.4
5,381,885	+		TX73_024775	0.79	-3.6
5,381,885	+		TX73_024775	0.79	-3.5
5,381,885	+		TX73_024775	0.79	-2.3
5,381,915	-		TX73_024775	0.82	-2.5
5,381,934	+		TX73_024775	0.83	-3.8
5,382,020	+				-1.4
5,382,020	+				-1.4
5,382,040	+				-1.1
5,382,074	-				-3.1
5,382,085	-				+0.4
5,382,129	+				-0.5
5,382,129	+				+0.2
5,382,137	-				+1.1
5,382,153	-				+0.0
5,382,153	-				-0.1
5,382,190	+				-0.3
5,382,198	-				-0.1
5,382,198	-				-1.2
5,382,200	+				-1.2
5,382,210	+				-0.1
5,382,240	-				-2.0
5,382,241	+				+0.4
5,382,241	+				+0.2
5,382,281	+				+0.7
5,382,289	-				-0.1
5,382,290	+				-0.8
5,382,315	+				+0.7
5,382,323	-				+0.9
5,382,329	+				-0.2
5,382,331	-				+0.1
5,382,351	+				-1.4
5,382,360	-				-0.7
5,382,385	+		TX73_024780	0.11	+0.6
5,382,393	-		TX73_024780	0.11	-0.1
5,382,427	-		TX73_024780	0.15	-0.8
5,382,430	-		TX73_024780	0.15	+0.5
5,382,448	-		TX73_024780	0.17	-0.3
5,382,472	-		TX73_024780	0.20	+0.3
5,382,473	+		TX73_024780	0.20	+0.1
5,382,473	+		TX73_024780	0.20	-0.6
5,382,473	+		TX73_024780	0.20	+0.6
5,382,481	-		TX73_024780	0.20	+1.2
5,382,561	+		TX73_024780	0.29	+0.6
5,382,568	-		TX73_024780	0.29	+1.3
5,382,585	-		TX73_024780	0.31	-0.3
5,382,594	+		TX73_024780	0.32	-2.4
5,382,602	-		TX73_024780	0.33	-1.5
5,382,623	+		TX73_024780	0.35	-0.4
5,382,661	-		TX73_024780	0.39	-1.1
5,382,663	+		TX73_024780	0.39	-0.1
5,382,663	+		TX73_024780	0.39	-0.6
5,382,671	-		TX73_024780	0.40	+1.3
5,382,671	-		TX73_024780	0.40	+0.4
5,382,689	+		TX73_024780	0.42	-1.6
5,382,696	+		TX73_024780	0.43	-0.2
5,382,697	-		TX73_024780	0.43	-0.3
5,382,697	-		TX73_024780	0.43	-0.9
5,382,704	-		TX73_024780	0.43	+0.7
5,382,730	-		TX73_024780	0.46	+0.7
5,382,732	+		TX73_024780	0.46	+0.6
5,382,732	+		TX73_024780	0.46	+3.1
5,382,732	-		TX73_024780	0.46	+1.0
5,382,740	-		TX73_024780	0.47	-1.6
5,382,775	+		TX73_024780	0.51	+0.0
5,382,826	+		TX73_024780	0.56	-0.1
5,382,853	+		TX73_024780	0.59	+0.1
5,382,861	-		TX73_024780	0.60	+0.9
5,382,861	-		TX73_024780	0.60	-2.2
5,382,875	+		TX73_024780	0.61	+0.5
5,382,880	+		TX73_024780	0.62	+0.6
5,382,888	-		TX73_024780	0.62	+0.8
5,382,895	-		TX73_024780	0.63	+0.5
5,382,899	-		TX73_024780	0.64	+0.4
5,382,910	+		TX73_024780	0.65	-0.1
5,382,915	+		TX73_024780	0.65	+0.0
5,382,915	+		TX73_024780	0.65	+0.6
5,382,915	+		TX73_024780	0.65	-0.4
5,382,933	-		TX73_024780	0.67	-0.0
5,382,940	-		TX73_024780	0.68	-0.2
5,382,947	+		TX73_024780	0.69	-0.2
5,382,962	-		TX73_024780	0.70	+0.7
5,382,967	-		TX73_024780	0.71	-1.4
5,382,969	+		TX73_024780	0.71	+0.2
5,382,977	-		TX73_024780	0.72	+0.1
5,382,990	-		TX73_024780	0.73	+1.0
5,383,011	+		TX73_024780	0.75	+0.1
5,383,023	-		TX73_024780	0.76	+0.5
5,383,037	+		TX73_024780	0.78	+1.4
5,383,037	+		TX73_024780	0.78	+0.4
5,383,037	+		TX73_024780	0.78	-0.3
5,383,043	+		TX73_024780	0.78	+0.4
5,383,045	-		TX73_024780	0.79	+0.6
5,383,045	-		TX73_024780	0.79	+0.2
5,383,045	-		TX73_024780	0.79	-3.8
5,383,045	-		TX73_024780	0.79	-1.1
5,383,045	-		TX73_024780	0.79	-1.0
5,383,100	+		TX73_024780	0.84	+1.5
5,383,116	+		TX73_024780	0.86	-0.2
5,383,117	+		TX73_024780	0.86	-0.8
5,383,131	-		TX73_024780	0.88	+0.5
5,383,146	+		TX73_024780	0.89	+0.1
5,383,146	+		TX73_024780	0.89	+1.0
5,383,154	-		TX73_024780	0.90	+1.7
5,383,154	-		TX73_024780	0.90	+1.0
5,383,181	-				-0.1
5,383,191	-				+0.3
5,383,235	+				+2.1
5,383,235	+				+0.3
5,383,235	+				+1.3
5,383,236	+				+0.1
5,383,243	-				-2.3
5,383,245	-				-0.5
5,383,249	+				+0.6
5,383,249	+				+1.6
5,383,255	+				-0.3
5,383,257	-				-0.1
5,383,261	+				+1.0
5,383,261	+				+0.0
5,383,261	+				-0.4
5,383,261	+				+0.7
5,383,261	+				-1.4
5,383,261	+				+0.8
5,383,261	+				-2.9
5,383,261	+				-3.7
5,383,261	+				-2.7
5,383,268	+				+0.7
5,383,269	-				+0.2
5,383,269	-				+0.7
5,383,269	-				-2.2
5,383,269	-				+0.6
5,383,269	-				-0.8
5,383,269	-				-0.1
5,383,269	-				+1.4
5,383,279	-				+0.9
5,383,289	-				+0.1
5,383,329	+		TX73_024785	0.10	+1.1
5,383,341	-		TX73_024785	0.12	+0.1
5,383,347	-		TX73_024785	0.12	+0.4
5,383,361	+		TX73_024785	0.14	-2.8
5,383,366	+		TX73_024785	0.15	+0.8
5,383,374	-		TX73_024785	0.16	+2.4
5,383,394	+		TX73_024785	0.18	+0.1
5,383,409	+		TX73_024785	0.20	-1.5
5,383,430	+		TX73_024785	0.23	+1.4
5,383,436	+		TX73_024785	0.24	-0.7
5,383,446	-		TX73_024785	0.25	-0.2
5,383,491	-		TX73_024785	0.31	+0.2
5,383,503	-		TX73_024785	0.32	-3.0
5,383,507	+		TX73_024785	0.33	-1.4
5,383,518	-		TX73_024785	0.34	-4.3
5,383,530	+		TX73_024785	0.36	+0.4
5,383,535	+		TX73_024785	0.36	+0.4
5,383,571	+		TX73_024785	0.41	+0.4
5,383,572	+		TX73_024785	0.41	+0.4
5,383,575	-		TX73_024785	0.42	+0.5
5,383,579	-		TX73_024785	0.42	-2.4
5,383,580	-		TX73_024785	0.42	+0.5
5,383,601	-		TX73_024785	0.45	+0.0
5,383,616	+		TX73_024785	0.47	+0.5
5,383,624	-		TX73_024785	0.48	+0.5
5,383,642	-		TX73_024785	0.50	-1.8
5,383,646	+		TX73_024785	0.51	+0.3
5,383,651	+		TX73_024785	0.51	-0.1
5,383,659	-		TX73_024785	0.52	+1.1
5,383,665	+		TX73_024785	0.53	-2.0
5,383,669	-		TX73_024785	0.54	-0.8
5,383,716	+		TX73_024785	0.60	+2.0
5,383,716	+		TX73_024785	0.60	-0.8
5,383,738	-		TX73_024785	0.62	+0.4
5,383,768	+		TX73_024785	0.66	+1.0
5,383,779	+		TX73_024785	0.68	+0.9
5,383,784	+		TX73_024785	0.68	-0.3
5,383,802	-		TX73_024785	0.71	+0.7
5,383,841	+		TX73_024785	0.76	+0.4
5,383,845	-		TX73_024785	0.76	+0.2
5,383,858	+		TX73_024785	0.78	+0.7
5,383,860	+		TX73_024785	0.78	-1.2
5,383,866	-		TX73_024785	0.79	+0.6
5,383,866	-		TX73_024785	0.79	-2.2
5,383,868	-		TX73_024785	0.79	+1.8
5,383,879	+		TX73_024785	0.81	-0.3
5,383,879	+		TX73_024785	0.81	-0.7
5,383,879	+		TX73_024785	0.81	+0.6
5,383,894	-		TX73_024785	0.82	-0.6
5,383,915	+		TX73_024785	0.85	+0.6
5,383,916	+		TX73_024785	0.85	+0.1
5,383,919	-		TX73_024785	0.86	-1.0
5,383,924	-		TX73_024785	0.86	-3.6
5,383,926	+		TX73_024785	0.87	-0.8
5,383,930	+		TX73_024785	0.87	-0.3
5,383,934	-		TX73_024785	0.88	-1.1
5,383,946	+		TX73_024785	0.89	+1.0
5,383,951	+		TX73_024785	0.90	+1.4
5,383,966	-				-0.0
5,383,972	+				-0.5
5,383,980	-				+1.4
5,383,982	+				-0.7
5,384,025	+				-0.8
5,384,032	+				-0.2
5,384,067	+				+0.3
5,384,087	+				-0.2
5,384,097	-				-0.5
5,384,106	+				+0.6
5,384,113	+				+0.0
5,384,162	+		TX73_024790	0.11	+0.4
5,384,175	-		TX73_024790	0.12	+0.5
5,384,177	+		TX73_024790	0.12	-0.8
5,384,177	+		TX73_024790	0.12	-2.2
5,384,237	-		TX73_024790	0.17	-0.1
5,384,239	+		TX73_024790	0.17	+0.5