Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_021760

Experiment: 4-Hydroxybenzoate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxybenzoate (C)
4,741,273	+		TX73_021750	0.30	-0.3
4,741,290	+		TX73_021750	0.32	-2.0
4,741,308	-		TX73_021750	0.35	+1.1
4,741,332	-		TX73_021750	0.39	+0.4
4,741,333	+		TX73_021750	0.39	-0.4
4,741,346	-		TX73_021750	0.41	-0.1
4,741,347	+		TX73_021750	0.41	-0.6
4,741,353	+		TX73_021750	0.42	-0.7
4,741,353	+		TX73_021750	0.42	-0.1
4,741,361	-		TX73_021750	0.43	+2.0
4,741,375	+		TX73_021750	0.45	+0.5
4,741,386	+		TX73_021750	0.47	+0.9
4,741,394	-		TX73_021750	0.48	+0.9
4,741,394	-		TX73_021750	0.48	+0.4
4,741,425	+		TX73_021750	0.53	+0.4
4,741,430	+		TX73_021750	0.53	+1.4
4,741,433	-		TX73_021750	0.54	-1.0
4,741,433	-		TX73_021750	0.54	+0.1
4,741,433	-		TX73_021750	0.54	-0.0
4,741,449	+		TX73_021750	0.56	-2.5
4,741,455	-		TX73_021750	0.57	+0.6
4,741,460	+		TX73_021750	0.58	-0.2
4,741,460	+		TX73_021750	0.58	-0.3
4,741,475	+		TX73_021750	0.60	-1.1
4,741,476	-		TX73_021750	0.60	+0.2
4,741,483	-		TX73_021750	0.61	-0.3
4,741,502	+		TX73_021750	0.64	+0.8
4,741,515	+		TX73_021750	0.66	+0.7
4,741,523	-		TX73_021750	0.67	+0.1
4,741,549	+		TX73_021750	0.71	+1.9
4,741,549	+		TX73_021750	0.71	+0.5
4,741,571	-		TX73_021750	0.75	+0.0
4,741,605	+		TX73_021750	0.80	+1.0
4,741,624	-		TX73_021750	0.83	+0.2
4,741,627	+		TX73_021750	0.83	-2.6
4,741,651	-		TX73_021750	0.87	-0.6
4,741,659	+		TX73_021750	0.88	+0.5
4,741,667	-		TX73_021750	0.89	+0.5
4,741,667	-		TX73_021750	0.89	+0.2
4,741,711	+				-0.7
4,741,720	+				+0.7
4,741,746	+				+0.8
4,741,746	+				-0.3
4,741,746	+				+0.2
4,741,746	+				+0.5
4,741,752	+				-0.2
4,741,755	+				-0.7
4,741,767	+				-2.4
4,741,784	+				+0.1
4,741,837	-				-0.6
4,741,983	-				+1.6
4,742,085	-				+0.2
4,742,103	+				-0.5
4,742,111	-				+0.2
4,742,133	-				-2.4
4,742,136	+				-0.2
4,742,136	+				+0.3
4,742,147	+				+0.8
4,742,171	-				+0.1
4,742,187	-				+1.1
4,742,190	+				-0.4
4,742,198	-				-1.2
4,742,255	+				-0.3
4,742,263	-				-1.6
4,742,280	+				+0.4
4,742,307	+				+0.6
4,742,313	-				+0.9
4,742,315	-				+0.8
4,742,350	+				+0.1
4,742,376	+		TX73_021760	0.12	+0.3
4,742,385	+		TX73_021760	0.13	-0.5
4,742,404	-		TX73_021760	0.15	-1.3
4,742,425	-		TX73_021760	0.17	-0.6
4,742,524	+		TX73_021760	0.29	+0.2
4,742,524	+		TX73_021760	0.29	+0.2
4,742,542	+		TX73_021760	0.31	+0.9
4,742,641	-		TX73_021760	0.42	+0.6
4,742,692	+		TX73_021760	0.48	+0.0
4,742,694	+		TX73_021760	0.48	-1.3
4,742,700	-		TX73_021760	0.49	+0.3
4,742,704	+		TX73_021760	0.50	-0.5
4,742,704	+		TX73_021760	0.50	+0.7
4,742,704	+		TX73_021760	0.50	-0.7
4,742,740	+		TX73_021760	0.54	+1.3
4,742,740	+		TX73_021760	0.54	+0.1
4,742,740	+		TX73_021760	0.54	-1.3
4,742,748	-		TX73_021760	0.55	-0.4
4,742,748	-		TX73_021760	0.55	-0.4
4,742,750	+		TX73_021760	0.55	+0.4
4,742,750	+		TX73_021760	0.55	-0.2
4,742,750	+		TX73_021760	0.55	+0.9
4,742,758	-		TX73_021760	0.56	+0.4
4,742,758	-		TX73_021760	0.56	-1.7
4,742,769	+		TX73_021760	0.57	-3.4
4,742,872	+		TX73_021760	0.69	+0.3
4,742,880	-		TX73_021760	0.70	-0.4
4,742,882	-		TX73_021760	0.70	-0.5
4,742,883	-		TX73_021760	0.70	-0.8
4,742,883	-		TX73_021760	0.70	-0.6
4,742,926	+		TX73_021760	0.75	-2.9
4,742,927	-		TX73_021760	0.75	-3.1
4,742,931	+		TX73_021760	0.76	-0.5
4,742,934	-		TX73_021760	0.76	-0.6
4,743,056	+				-0.1
4,743,056	+				-1.8
4,743,105	+				+0.4
4,743,112	-				-0.5
4,743,274	+				+0.7
4,743,282	-				-1.5
4,743,293	+				+0.2
4,743,301	-				-0.6
4,743,301	-				-1.7
4,743,316	-				-0.7
4,743,335	-				-0.5
4,743,337	-				-1.6
4,743,359	-		TX73_021765	0.10	+0.4
4,743,379	+		TX73_021765	0.13	+0.7
4,743,406	-		TX73_021765	0.17	+1.1
4,743,425	-		TX73_021765	0.19	-0.7
4,743,426	+		TX73_021765	0.19	-0.2
4,743,451	-		TX73_021765	0.23	-0.4
4,743,461	-		TX73_021765	0.24	-0.0
4,743,475	+		TX73_021765	0.26	-0.9
4,743,495	+		TX73_021765	0.29	-1.9
4,743,510	-		TX73_021765	0.31	-0.2
4,743,519	-		TX73_021765	0.32	+0.7
4,743,574	+		TX73_021765	0.39	+0.2
4,743,582	-		TX73_021765	0.40	+0.2
4,743,582	-		TX73_021765	0.40	-1.1
4,743,599	-		TX73_021765	0.42	+0.9
4,743,603	+		TX73_021765	0.43	-0.1
4,743,658	-		TX73_021765	0.50	+0.1
4,743,658	-		TX73_021765	0.50	+0.7
4,743,675	+		TX73_021765	0.53	-0.2
4,743,675	+		TX73_021765	0.53	-1.1
4,743,675	+		TX73_021765	0.53	+0.1
4,743,675	+		TX73_021765	0.53	+0.8
4,743,675	+		TX73_021765	0.53	-0.8
4,743,683	-		TX73_021765	0.54	-1.4
4,743,683	-		TX73_021765	0.54	+0.6
4,743,683	-		TX73_021765	0.54	-0.0
4,743,683	-		TX73_021765	0.54	-0.6
4,743,683	-		TX73_021765	0.54	-0.4
4,743,683	-		TX73_021765	0.54	-0.1
4,743,683	-		TX73_021765	0.54	-0.0
4,743,701	+		TX73_021765	0.56	-1.1
4,743,730	+		TX73_021765	0.60	-1.4
4,743,745	+		TX73_021765	0.62	+0.6
4,743,745	+		TX73_021765	0.62	-0.3
4,743,745	+		TX73_021765	0.62	-1.6
4,743,745	+		TX73_021765	0.62	+0.5
4,743,745	+		TX73_021765	0.62	+0.5
4,743,745	+		TX73_021765	0.62	+0.9
4,743,745	+		TX73_021765	0.62	+1.3
4,743,753	-		TX73_021765	0.63	-1.3
4,743,753	-		TX73_021765	0.63	-0.7
4,743,753	-		TX73_021765	0.63	+0.2
4,743,753	-		TX73_021765	0.63	+0.2
4,743,755	+		TX73_021765	0.63	+0.4
4,743,772	+		TX73_021765	0.66	+1.5
4,743,772	+		TX73_021765	0.66	-0.4
4,743,772	+		TX73_021765	0.66	-0.0
4,743,819	-		TX73_021765	0.72	+0.1
4,743,929	+		TX73_021765	0.87	+0.1
4,743,929	+		TX73_021765	0.87	+0.3
4,743,937	-		TX73_021765	0.88	-1.5
4,743,937	-		TX73_021765	0.88	-0.1
4,743,939	-		TX73_021765	0.88	-0.5
4,743,949	+		TX73_021765	0.89	+0.3
4,743,957	+				+1.4
4,743,970	+				-0.4
4,744,002	+				-0.3
4,744,004	+				-2.5
4,744,037	-				-0.2
4,744,037	-				-0.8
4,744,041	+				-1.1
4,744,098	-				+0.3
4,744,099	+				+0.3
4,744,135	+				-0.2