Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_014835

Experiment: 4-Hydroxybenzoate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxybenzoate (C)
3,239,126	-				-2.1
3,239,126	-				+1.5
3,239,171	-				+1.0
3,239,171	-				-1.1
3,239,171	-				+0.5
3,239,171	-				+1.1
3,239,178	-				+0.0
3,239,181	-				-0.0
3,239,181	-				-1.1
3,239,213	-				-0.3
3,239,280	-				-0.1
3,239,289	-				-1.2
3,239,418	+				+1.5
3,239,418	+				+1.5
3,239,439	+				+1.5
3,239,452	-				+0.5
3,239,453	+				+2.1
3,239,456	+				-1.4
3,239,464	-				-0.6
3,239,466	-				-1.7
3,239,475	+				-1.6
3,239,480	+				+0.1
3,239,483	-				+1.3
3,239,509	+		TX73_014830	0.21	+1.3
3,239,517	-		TX73_014830	0.26	+0.7
3,239,568	+		TX73_014830	0.62	-1.2
3,239,568	+		TX73_014830	0.62	+1.6
3,239,576	-		TX73_014830	0.68	-0.7
3,239,576	-		TX73_014830	0.68	-0.1
3,239,587	+		TX73_014830	0.76	+0.8
3,239,589	-		TX73_014830	0.77	+0.0
3,239,606	+		TX73_014830	0.89	-1.2
3,239,607	-				-1.9
3,239,611	+				+0.4
3,239,611	+				+2.2
3,239,611	+				+1.0
3,239,611	+				-0.0
3,239,614	-				-1.9
3,239,619	-				+0.7
3,239,619	-				+0.9
3,239,651	+				-0.4
3,239,653	+				+0.9
3,239,667	+				+0.4
3,239,675	+				-0.3
3,239,675	-				-1.1
3,239,730	-				-1.4
3,239,745	+				-2.4
3,239,755	+				+0.6
3,239,775	+				+0.2
3,239,776	-				-0.5
3,239,802	+				+0.3
3,239,839	-				+0.2
3,239,841	+				-0.0
3,239,843	+				-4.2
3,239,873	-				+0.4
3,239,876	-				-0.8
3,239,886	+				+1.0
3,239,891	+				-0.7
3,239,900	-				-1.6
3,239,929	-		TX73_014835	0.12	-0.7
3,239,934	+		TX73_014835	0.12	-3.0
3,239,934	+		TX73_014835	0.12	-1.9
3,239,934	+		TX73_014835	0.12	-4.3
3,239,934	+		TX73_014835	0.12	+0.7
3,239,934	+		TX73_014835	0.12	-0.7
3,239,934	+		TX73_014835	0.12	-0.6
3,239,934	+		TX73_014835	0.12	-3.8
3,239,934	+		TX73_014835	0.12	+0.4
3,239,934	+		TX73_014835	0.12	+0.0
3,239,934	+		TX73_014835	0.12	-1.7
3,239,934	+		TX73_014835	0.12	-0.3
3,239,942	-		TX73_014835	0.13	-2.8
3,239,942	-		TX73_014835	0.13	+0.3
3,239,942	-		TX73_014835	0.13	-1.5
3,239,942	-		TX73_014835	0.13	+0.3
3,239,942	-		TX73_014835	0.13	-1.2
3,239,942	-		TX73_014835	0.13	-0.9
3,239,942	-		TX73_014835	0.13	-1.6
3,239,942	-		TX73_014835	0.13	-3.0
3,239,942	-		TX73_014835	0.13	-3.0
3,239,942	-		TX73_014835	0.13	-1.8
3,239,967	+		TX73_014835	0.14	-1.6
3,239,978	+		TX73_014835	0.15	-3.1
3,239,978	+		TX73_014835	0.15	-0.4
3,239,980	-		TX73_014835	0.15	-2.1
3,239,986	-		TX73_014835	0.16	-2.7
3,239,986	-		TX73_014835	0.16	-0.3
3,239,991	-		TX73_014835	0.16	-1.2
3,240,050	+		TX73_014835	0.20	-0.6
3,240,050	+		TX73_014835	0.20	-0.1
3,240,057	+		TX73_014835	0.21	-1.2
3,240,058	-		TX73_014835	0.21	-0.9
3,240,063	+		TX73_014835	0.21	+1.0
3,240,071	-		TX73_014835	0.22	-0.1
3,240,071	-		TX73_014835	0.22	-2.2
3,240,071	-		TX73_014835	0.22	-2.2
3,240,079	+		TX73_014835	0.22	-0.9
3,240,081	-		TX73_014835	0.22	+1.1
3,240,087	+		TX73_014835	0.23	-2.9
3,240,097	-		TX73_014835	0.24	-0.6
3,240,100	-		TX73_014835	0.24	-0.5
3,240,100	-		TX73_014835	0.24	-3.1
3,240,100	-		TX73_014835	0.24	-0.3
3,240,102	-		TX73_014835	0.24	-0.4
3,240,111	+		TX73_014835	0.25	-3.8
3,240,122	+		TX73_014835	0.25	-2.4
3,240,124	-		TX73_014835	0.25	+0.7
3,240,124	-		TX73_014835	0.25	-2.7
3,240,148	+		TX73_014835	0.27	-4.5
3,240,166	+		TX73_014835	0.28	+1.2
3,240,171	+		TX73_014835	0.29	-1.2
3,240,179	-		TX73_014835	0.29	-0.5
3,240,179	-		TX73_014835	0.29	-0.9
3,240,184	-		TX73_014835	0.30	-1.2
3,240,186	-		TX73_014835	0.30	-0.7
3,240,196	-		TX73_014835	0.31	-1.3
3,240,216	-		TX73_014835	0.32	-1.7
3,240,217	-		TX73_014835	0.32	-0.4
3,240,225	-		TX73_014835	0.33	-0.9
3,240,242	-		TX73_014835	0.34	+0.4
3,240,246	-		TX73_014835	0.34	-1.4
3,240,304	+		TX73_014835	0.38	-3.6
3,240,304	+		TX73_014835	0.38	-1.1
3,240,309	+		TX73_014835	0.38	+0.5
3,240,311	-		TX73_014835	0.39	-4.7
3,240,313	+		TX73_014835	0.39	-2.1
3,240,317	-		TX73_014835	0.39	-1.3
3,240,358	+		TX73_014835	0.42	-0.6
3,240,368	+		TX73_014835	0.43	-0.5
3,240,374	-		TX73_014835	0.43	-1.5
3,240,381	+		TX73_014835	0.44	-2.9
3,240,381	+		TX73_014835	0.44	-0.5
3,240,382	+		TX73_014835	0.44	+1.2
3,240,389	-		TX73_014835	0.44	-1.2
3,240,389	-		TX73_014835	0.44	-0.9
3,240,395	-		TX73_014835	0.45	-3.4
3,240,411	-		TX73_014835	0.46	-0.0
3,240,443	+		TX73_014835	0.48	-3.8
3,240,451	+		TX73_014835	0.48	-1.6
3,240,469	-		TX73_014835	0.50	-0.8
3,240,479	-		TX73_014835	0.50	+0.4
3,240,490	-		TX73_014835	0.51	-3.0
3,240,493	+		TX73_014835	0.51	-1.9
3,240,557	-		TX73_014835	0.56	-1.1
3,240,558	+		TX73_014835	0.56	-0.3
3,240,558	+		TX73_014835	0.56	-1.6
3,240,558	+		TX73_014835	0.56	-1.6
3,240,558	+		TX73_014835	0.56	-2.1
3,240,572	+		TX73_014835	0.57	-0.8
3,240,607	-		TX73_014835	0.59	-1.1
3,240,613	+		TX73_014835	0.60	-0.5
3,240,621	-		TX73_014835	0.60	-0.7
3,240,621	-		TX73_014835	0.60	-1.5
3,240,649	-		TX73_014835	0.62	-1.2
3,240,669	+		TX73_014835	0.64	-3.4
3,240,672	-		TX73_014835	0.64	-0.0
3,240,675	+		TX73_014835	0.64	-4.7
3,240,683	-		TX73_014835	0.65	-1.8
3,240,702	+		TX73_014835	0.66	-0.2
3,240,705	-		TX73_014835	0.66	-0.8
3,240,735	-		TX73_014835	0.68	-3.4
3,240,772	+		TX73_014835	0.71	-1.7
3,240,795	+		TX73_014835	0.73	+0.0
3,240,797	+		TX73_014835	0.73	+0.8
3,240,805	-		TX73_014835	0.73	-3.0
3,240,818	-		TX73_014835	0.74	-3.0
3,240,844	+		TX73_014835	0.76	-2.3
3,240,852	-		TX73_014835	0.77	-3.4
3,240,854	-		TX73_014835	0.77	-2.6
3,240,854	-		TX73_014835	0.77	-0.6
3,240,878	-		TX73_014835	0.78	+0.4
3,240,905	+		TX73_014835	0.80	-0.6
3,240,905	+		TX73_014835	0.80	-1.9
3,240,905	+		TX73_014835	0.80	-2.3
3,240,913	-		TX73_014835	0.81	+0.4
3,240,913	-		TX73_014835	0.81	-0.3
3,240,913	-		TX73_014835	0.81	-1.6
3,240,915	-		TX73_014835	0.81	-0.3
3,240,937	+		TX73_014835	0.83	-2.5
3,240,956	-		TX73_014835	0.84	-0.1
3,241,027	-		TX73_014835	0.89	-2.2
3,241,031	+		TX73_014835	0.89	-1.7
3,241,046	-				-2.0
3,241,092	+				-0.6
3,241,106	-				-0.0
3,241,113	+				-4.5
3,241,193	+				-3.1
3,241,203	-				+0.4
3,241,203	-				+0.7
3,241,230	-				-1.7
3,241,242	+				-1.6
3,241,248	+				-0.5
3,241,248	+				-0.8
3,241,249	+				+0.5
3,241,265	-				+0.2
3,241,312	+				-3.9
3,241,320	-				-4.2
3,241,347	+				-0.9
3,241,347	+				-2.3
3,241,355	-				-1.8
3,241,365	-				-2.2
3,241,367	+				-4.7
3,241,375	-				-1.5
3,241,381	-				-3.3
3,241,386	+				-4.7
3,241,403	-		TX73_014840	0.10	-0.8
3,241,403	-		TX73_014840	0.10	-4.7
3,241,436	+		TX73_014840	0.13	-4.2
3,241,452	+		TX73_014840	0.14	-4.6
3,241,502	-		TX73_014840	0.17	-3.3
3,241,512	+		TX73_014840	0.18	-4.1
3,241,512	-		TX73_014840	0.18	-1.0
3,241,518	+		TX73_014840	0.19	+1.6
3,241,520	-		TX73_014840	0.19	-1.0
3,241,603	-		TX73_014840	0.25	-1.5
3,241,606	+		TX73_014840	0.25	-2.0
3,241,617	+		TX73_014840	0.26	-2.5
3,241,654	+		TX73_014840	0.28	-1.4
3,241,667	+		TX73_014840	0.29	-4.0
3,241,679	-		TX73_014840	0.30	-2.0
3,241,771	-		TX73_014840	0.37	-3.4
3,241,786	-		TX73_014840	0.38	-0.7
3,241,818	+		TX73_014840	0.40	-4.3
3,241,826	-		TX73_014840	0.41	-1.7
3,241,847	-		TX73_014840	0.42	-4.3
3,241,889	+		TX73_014840	0.45	-3.3
3,241,889	+		TX73_014840	0.45	-1.3
3,241,897	-		TX73_014840	0.46	-1.5
3,241,903	+		TX73_014840	0.46	-1.5
3,241,903	+		TX73_014840	0.46	-4.7
3,241,903	+		TX73_014840	0.46	-4.2
3,241,903	+		TX73_014840	0.46	-2.9
3,241,903	+		TX73_014840	0.46	-0.8
3,241,903	+		TX73_014840	0.46	-1.4
3,241,910	+		TX73_014840	0.47	-3.9
3,241,911	-		TX73_014840	0.47	-1.2
3,241,911	-		TX73_014840	0.47	-1.9
3,241,911	-		TX73_014840	0.47	-1.8
3,241,931	-		TX73_014840	0.48	-2.0
3,241,965	+		TX73_014840	0.51	-3.8
3,241,971	-		TX73_014840	0.51	-4.2
3,241,973	+		TX73_014840	0.51	-4.8
3,241,973	-		TX73_014840	0.51	-0.6
3,241,973	-		TX73_014840	0.51	-4.3
3,241,980	+		TX73_014840	0.52	+0.1
3,241,985	+		TX73_014840	0.52	-0.5
3,241,993	-		TX73_014840	0.53	-2.1
3,242,016	+		TX73_014840	0.54	-3.1
3,242,016	+		TX73_014840	0.54	-0.1
3,242,017	-		TX73_014840	0.54	-4.1
3,242,040	+		TX73_014840	0.56	-3.8
3,242,040	+		TX73_014840	0.56	-4.3
3,242,040	+		TX73_014840	0.56	-1.4
3,242,042	+		TX73_014840	0.56	-2.4
3,242,050	-		TX73_014840	0.57	-0.9
3,242,052	+		TX73_014840	0.57	-4.0
3,242,058	+		TX73_014840	0.57	-0.6
3,242,068	+		TX73_014840	0.58	-1.2
3,242,076	-		TX73_014840	0.59	-0.9
3,242,106	+		TX73_014840	0.61	-2.4
3,242,139	+		TX73_014840	0.63	-0.8